FFAS03 list of results COG1018 / PfamA32U

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 41-60 of 8581 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
41 [J] COG0042 tRNA-dihydrouridine synthase 331 PfamA32U 22-330 -104.000 70 PF01207.17; DUSB_ECOLI/13-321; Dihydrouridine synthase (Dus)
42 [H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases 497 PfamA32U 13-434 -105.000 26 PF01977.16; L2G6I9_COLGN/18-439; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
43 [F] COG0044 Dihydroorotase and related cyclic amidohydrolases 489 PfamA32U 52-438 -79.700 23 PF01979.20; PYRC_BACSU/50-420; Amidohydrolase family
44 [C] COG0045 Succinyl-CoA synthetase, beta subunit 398 PfamA32U 2-212 -65.500 39 PF08442.10; A2EBX0_TRIVA/11-220; ATP-grasp domain
243-393 -39.500 21 PF16114.5; H2TQH3_TAKRU/244-421; ATP citrate lyase citrate-binding
45 [F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 775 PfamA32U 39-85 -13.900 27 PF18072.1; A0A093ZAN4_9PEZI/183-232; Formylglycinamide ribonucleotide amidotransferase linker domain
126-384 -20.300 13 PF12818.7; VG75_EHV2/265-542; dsDNA viral tegument protein
46 [F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 227 PfamA32U 2-220 -75.600 26 PF13507.6; A5WCV9_PSYWF/1086-1340; CobB/CobQ-like glutamine amidotransferase domain
47 [J] COG0048 Ribosomal protein S12 125 PfamA32U 12-114 -53.700 35 PF00164.25; RS12_THEKO/32-146; Ribosomal protein S12/S23
48 [J] COG0049 Ribosomal protein S7 156 PfamA32U 1-149 -79.800 57 PF00177.21; F7UWE8_EEGSY/1-149; Ribosomal protein S7p/S5e
49 [J] COG0050 GTPases - translation elongation factors 394 PfamA32U 1-205 -14.300 12 PF05049.13; Q9DCE9_MOUSE/50-412; Interferon-inducible GTPase (IIGP)
14-161 -31.800 31 PF00009.27; EF2_METJA/19-258; Elongation factor Tu GTP binding domain
225-294 -28.300 33 PF03144.25; SELB_METJA/204-271; Elongation factor Tu domain 2
298-393 -31.500 58 PF03143.17; EFTU_BORBU/299-393; Elongation factor Tu C-terminal domain
50 [J] COG0051 Ribosomal protein S10 102 PfamA32U 7-101 -60.100 65 PF00338.22; RS10_LEPBP/7-101; Ribosomal protein S10p/S20e
51 [J] COG0052 Ribosomal protein S2 246 PfamA32U 9-224 -105.000 53 PF00318.20; R6P910_9CLOT/9-224; Ribosomal protein S2
52 [P] COG0053 Predicted Co/Zn/Cd cation transporters 335 PfamA32U 38-231 -60.200 20 PF01545.21; Q5PQX4_RAT/114-333; Cation efflux family
235-311 -38.600 22 PF16916.5; B5EFX3_GEOBB/211-289; Dimerisation domain of Zinc Transporter
53 [H] COG0054 Riboflavin synthase beta-chain 173 PfamA32U 28-168 -80.300 46 PF00885.19; R7PPI3_9FIRM/12-151; 6,7-dimethyl-8-ribityllumazine synthase
54 [C] COG0055 F0F1-type ATP synthase, beta subunit 468 PfamA32U 6-75 -10.300 20 PF02874.23; Q4CXR7_TRYCC/40-106; ATP synthase alpha/beta family, beta-barrel domain
135-348 -82.400 35 PF00006.25; F4A1L9_MAHA5/145-353; ATP synthase alpha/beta family, nucleotide-binding domain
356-426 -13.500 16 PF18269.1; V4YPH3_9PROT/367-438; T3SS EscN ATPase C-terminal domain
55 [C] COG0056 F0F1-type ATP synthase, alpha subunit 502 PfamA32U 31-90 -12.000 10 PF02874.23; Q4CXR7_TRYCC/40-106; ATP synthase alpha/beta family, beta-barrel domain
149-364 -81.800 32 PF00006.25; F4A1L9_MAHA5/145-353; ATP synthase alpha/beta family, nucleotide-binding domain
371-498 -28.500 58 PF00306.27; A0A0D3VDF5_9BACL/371-496; ATP synthase alpha/beta chain, C terminal domain
56 [G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 335 PfamA32U 3-105 -46.800 49 PF00044.24; Q8KCE2_CHLTE/4-104; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
158-314 -80.900 58 PF02800.20; G3P2_NOSS1/159-315; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
57 [G] COG0058 Glucan phosphorylase 815 PfamA32U 21-119 -17.800 4 PF11897.8; Q47IJ2_DECAR/14-123; Protein of unknown function (DUF3417 topsan)
102-810 -200.000 47 PF00343.20; C1EE99_MICCC/167-879; Carbohydrate phosphorylase
58 [EH] COG0059 Ketol-acid reductoisomerase 492 PfamA32U 1-198 -12.000 15 PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase
35-204 -34.900 38 PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain
38-478 -11.600 8 PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase
169-302 -13.700 8 PF16896.5; Q28MS9_JANSC/129-282; Phosphogluconate dehydrogenase (decarboxylating) C-term
346-484 -51.500 27 PF01450.19; G8SL44_ACTS5/185-328; Acetohydroxy acid isomeroreductase, catalytic domain
59 [J] COG0060 Isoleucyl-tRNA synthetase 941 PfamA32U 31-669 -75.900 23 PF00133.22; SYV_YEAST/156-780; tRNA synthetases class I (I, L, M and V)
686-846 -51.100 40 PF08264.13; A3DDJ3_CLOTH/685-843; Anticodon-binding domain of tRNA
901-930 -18.400 46 PF06827.14; SYI_THEMA/884-913; Zinc finger found in FPG and IleRS
60 [G] COG0061 Predicted sugar kinase 266 PfamA32U 2-248 -63.100 23 PF01513.21; NADK_HAEIN/10-277; ATP-NAD kinase

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
41	`[J] COG0042 tRNA-dihydrouridine synthase`	`331`	`PfamA32U`	`22-330`	`-104.000`	`70`	`PF01207.17; DUSB_ECOLI/13-321; Dihydrouridine synthase (Dus)`
42	`[H] COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases`	`497`	`PfamA32U`	`13-434`	`-105.000`	`26`	`PF01977.16; L2G6I9_COLGN/18-439; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase`
43	`[F] COG0044 Dihydroorotase and related cyclic amidohydrolases`	`489`	`PfamA32U`	`52-438`	`-79.700`	`23`	`PF01979.20; PYRC_BACSU/50-420; Amidohydrolase family`
44	`[C] COG0045 Succinyl-CoA synthetase, beta subunit`	`398`	`PfamA32U`	`2-212`	`-65.500`	`39`	`PF08442.10; A2EBX0_TRIVA/11-220; ATP-grasp domain`
				`243-393`	`-39.500`	`21`	`PF16114.5; H2TQH3_TAKRU/244-421; ATP citrate lyase citrate-binding`
45	`[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain`	`775`	`PfamA32U`	`39-85`	`-13.900`	`27`	`PF18072.1; A0A093ZAN4_9PEZI/183-232; Formylglycinamide ribonucleotide amidotransferase linker domain`
				`126-384`	`-20.300`	`13`	`PF12818.7; VG75_EHV2/265-542; dsDNA viral tegument protein`
46	`[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain`	`227`	`PfamA32U`	`2-220`	`-75.600`	`26`	`PF13507.6; A5WCV9_PSYWF/1086-1340; CobB/CobQ-like glutamine amidotransferase domain`
47	`[J] COG0048 Ribosomal protein S12`	`125`	`PfamA32U`	`12-114`	`-53.700`	`35`	`PF00164.25; RS12_THEKO/32-146; Ribosomal protein S12/S23`
48	`[J] COG0049 Ribosomal protein S7`	`156`	`PfamA32U`	`1-149`	`-79.800`	`57`	`PF00177.21; F7UWE8_EEGSY/1-149; Ribosomal protein S7p/S5e`
49	`[J] COG0050 GTPases - translation elongation factors`	`394`	`PfamA32U`	`1-205`	`-14.300`	`12`	`PF05049.13; Q9DCE9_MOUSE/50-412; Interferon-inducible GTPase (IIGP)`
				`14-161`	`-31.800`	`31`	`PF00009.27; EF2_METJA/19-258; Elongation factor Tu GTP binding domain`
				`225-294`	`-28.300`	`33`	`PF03144.25; SELB_METJA/204-271; Elongation factor Tu domain 2`
				`298-393`	`-31.500`	`58`	`PF03143.17; EFTU_BORBU/299-393; Elongation factor Tu C-terminal domain`
50	`[J] COG0051 Ribosomal protein S10`	`102`	`PfamA32U`	`7-101`	`-60.100`	`65`	`PF00338.22; RS10_LEPBP/7-101; Ribosomal protein S10p/S20e`
51	`[J] COG0052 Ribosomal protein S2`	`246`	`PfamA32U`	`9-224`	`-105.000`	`53`	`PF00318.20; R6P910_9CLOT/9-224; Ribosomal protein S2`
52	`[P] COG0053 Predicted Co/Zn/Cd cation transporters`	`335`	`PfamA32U`	`38-231`	`-60.200`	`20`	`PF01545.21; Q5PQX4_RAT/114-333; Cation efflux family`
				`235-311`	`-38.600`	`22`	`PF16916.5; B5EFX3_GEOBB/211-289; Dimerisation domain of Zinc Transporter`
53	`[H] COG0054 Riboflavin synthase beta-chain`	`173`	`PfamA32U`	`28-168`	`-80.300`	`46`	`PF00885.19; R7PPI3_9FIRM/12-151; 6,7-dimethyl-8-ribityllumazine synthase`
54	`[C] COG0055 F0F1-type ATP synthase, beta subunit`	`468`	`PfamA32U`	`6-75`	`-10.300`	`20`	`PF02874.23; Q4CXR7_TRYCC/40-106; ATP synthase alpha/beta family, beta-barrel domain`
				`135-348`	`-82.400`	`35`	`PF00006.25; F4A1L9_MAHA5/145-353; ATP synthase alpha/beta family, nucleotide-binding domain`
				`356-426`	`-13.500`	`16`	`PF18269.1; V4YPH3_9PROT/367-438; T3SS EscN ATPase C-terminal domain`
55	`[C] COG0056 F0F1-type ATP synthase, alpha subunit`	`502`	`PfamA32U`	`31-90`	`-12.000`	`10`	`PF02874.23; Q4CXR7_TRYCC/40-106; ATP synthase alpha/beta family, beta-barrel domain`
				`149-364`	`-81.800`	`32`	`PF00006.25; F4A1L9_MAHA5/145-353; ATP synthase alpha/beta family, nucleotide-binding domain`
				`371-498`	`-28.500`	`58`	`PF00306.27; A0A0D3VDF5_9BACL/371-496; ATP synthase alpha/beta chain, C terminal domain`
56	`[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase`	`335`	`PfamA32U`	`3-105`	`-46.800`	`49`	`PF00044.24; Q8KCE2_CHLTE/4-104; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain`
				`158-314`	`-80.900`	`58`	`PF02800.20; G3P2_NOSS1/159-315; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain`
57	`[G] COG0058 Glucan phosphorylase`	`815`	`PfamA32U`	`21-119`	`-17.800`	`4`	`PF11897.8; Q47IJ2_DECAR/14-123; Protein of unknown function (DUF3417 topsan)`
				`102-810`	`-200.000`	`47`	`PF00343.20; C1EE99_MICCC/167-879; Carbohydrate phosphorylase`
58	`[EH] COG0059 Ketol-acid reductoisomerase`	`492`	`PfamA32U`	`1-198`	`-12.000`	`15`	`PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase`
				`35-204`	`-34.900`	`38`	`PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain`
				`38-478`	`-11.600`	`8`	`PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase`
				`169-302`	`-13.700`	`8`	`PF16896.5; Q28MS9_JANSC/129-282; Phosphogluconate dehydrogenase (decarboxylating) C-term`
				`346-484`	`-51.500`	`27`	`PF01450.19; G8SL44_ACTS5/185-328; Acetohydroxy acid isomeroreductase, catalytic domain`
59	`[J] COG0060 Isoleucyl-tRNA synthetase`	`941`	`PfamA32U`	`31-669`	`-75.900`	`23`	`PF00133.22; SYV_YEAST/156-780; tRNA synthetases class I (I, L, M and V)`
				`686-846`	`-51.100`	`40`	`PF08264.13; A3DDJ3_CLOTH/685-843; Anticodon-binding domain of tRNA`
				`901-930`	`-18.400`	`46`	`PF06827.14; SYI_THEMA/884-913; Zinc finger found in FPG and IleRS`
60	`[G] COG0061 Predicted sugar kinase`	`266`	`PfamA32U`	`2-248`	`-63.100`	`23`	`PF01513.21; NADK_HAEIN/10-277; ATP-NAD kinase`