FFAS03 list of results CSGID / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 IDP00001 aldehyde-alcohol dehydrogenase BA_4599 [Bacillus anthracis str. Ames] 867 HGM_OVER 603-703 -2.380 15 PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;
2 IDP00002 surface layer protein, (pxo1-54) GBAA_pXO1_0079 [Bacillus anthracis str. 'Ames Ancestor'] 404 HGM_OVER 21-206 -2.930 15 PB009233 Q7MX23_PORGI/1-175 PB009233; Pfam-B_9233;
3 IDP00003 gene: gerXC; spore germination protein xc, (pxo1-112) GBAA_pXO1_0158 [Bacillus anthracis str. 'Ames Ancestor'] 317 HGM_OVER 1-109 -7.860 14 PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
4 IDP00004 Chromosomal replication initiator protein dnaA BA_0001 [Bacillus anthracis str. Ames] 446 HGM_OVER 169-353 -3.560 9 HGC00816 gi|163609134|dbj|BABG01026932.1|1.0 TMP01075;
5 IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames] 1070 HGM_OVER 519-789 -3.680 7 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
6 IDP00006 immune inhibitor A metalloprotease BA_0672 [Bacillus anthracis str. Ames] 799 HGM_OVER 216-410 -5.590 8 PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;
7 IDP00007 gene: racE-1; glutamate racemase BA_0847 [Bacillus anthracis str. Ames] 276 HGM_OVER 10-118 -3.960 20 PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
8 IDP00008 gene: cysG; uroporphyrin-III C-methyltransferase BA_1445 [Bacillus anthracis str. Ames] 258 HGM_OVER 42-233 -4.150 8 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
9 IDP00009 3-dehydroquinate synthase BA_1538 [Bacillus anthracis str. Ames] 363 HGM_OVER 76-165 -3.610 17 PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;
10 IDP00010 uroporphyrin-III C-methyltransferase, putative BA_2144 [Bacillus anthracis str. Ames] 474 HGM_OVER 43-233 -3.980 9 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;
11 IDP00011 alcohol dehydrogenase, iron-containing BA_2222 [Bacillus anthracis str. Ames] 392 HGM_OVER 40-89 -2.880 16 PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
12 IDP00012 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) BA_2953 [Bacillus anthracis str. Ames] 429 HGM_OVER 316-405 -2.740 15 PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]
13 IDP00013 LPXTG-motif cell wall anchor domain protein BA_3254 [Bacillus anthracis str. Ames] 372 HGM_OVER 59-190 -5.690 12 PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
14 IDP00014 Protein recA (Recombinase A) BA_3915 [Bacillus anthracis str. Ames] 343 HGM_OVER 63-161 -5.710 14 PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;
15 IDP00015 UDP-N-acetylenolpyruvoylglucosamine reductase 1 (UDP-N-acetylmuramate dehydrogenase 1) BA_4048 [Bacillus anthracis str. Ames] 301 HGM_OVER 41-80 -4.140 7 PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
16 IDP00016 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (Meso-diaminopimelate-adding enzyme) (Meso-A2pm-adding enzyme) (UDP-N-acetylmuramyl-tripeptide synthetase) (UDP-MurNAc-tripeptide synthetase) BA_4053 [Bacillus anthracis str. Ames] 491 HGM_OVER 336-419 -3.250 15 PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
17 IDP00017 gene: ribBA; Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase); GTP cyclohydrolase-2 (GTP cyclohydrolase II)] BA_4333 [Bacillus anthracis str. Ames] 397 HGM_OVER 236-371 -4.080 14 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
18 IDP00018 gene: racE-2; glutamate racemase BA_4717 [Bacillus anthracis str. Ames] 269 HGM_OVER 7-115 -3.950 17 PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
19 IDP00019 gene: pykA-2; pyruvate kinase BA_4843 [Bacillus anthracis str. Ames] 585 HGM_OVER 107-310 -2.610 12 PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;
20 IDP00020 UDP-N-acetylenolpyruvoylglucosamine reductase 2 (UDP-N-acetylmuramate dehydrogenase 2) BA_5315 [Bacillus anthracis str. Ames] 305 HGM_OVER 70-273 -4.630 9 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`IDP00001 aldehyde-alcohol dehydrogenase BA_4599 [Bacillus anthracis str. Ames]`	`867`	`HGM_OVER`	`603-703`	`-2.380`	`15`	`PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;`
2	`IDP00002 surface layer protein, (pxo1-54) GBAA_pXO1_0079 [Bacillus anthracis str. 'Ames Ancestor']`	`404`	`HGM_OVER`	`21-206`	`-2.930`	`15`	`PB009233 Q7MX23_PORGI/1-175 PB009233; Pfam-B_9233;`
3	`IDP00003 gene: gerXC; spore germination protein xc, (pxo1-112) GBAA_pXO1_0158 [Bacillus anthracis str. 'Ames Ancestor']`	`317`	`HGM_OVER`	`1-109`	`-7.860`	`14`	`PB029229 gi\|150007903\|ref\|YP_001302646.1\| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi\|149936327\|gb\|ABR43024.1\| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]`
4	`IDP00004 Chromosomal replication initiator protein dnaA BA_0001 [Bacillus anthracis str. Ames]`	`446`	`HGM_OVER`	`169-353`	`-3.560`	`9`	`HGC00816 gi\|163609134\|dbj\|BABG01026932.1\|1.0 TMP01075;`
5	`IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]`	`1070`	`HGM_OVER`	`519-789`	`-3.680`	`7`	`PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;`
6	`IDP00006 immune inhibitor A metalloprotease BA_0672 [Bacillus anthracis str. Ames]`	`799`	`HGM_OVER`	`216-410`	`-5.590`	`8`	`PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;`
7	`IDP00007 gene: racE-1; glutamate racemase BA_0847 [Bacillus anthracis str. Ames]`	`276`	`HGM_OVER`	`10-118`	`-3.960`	`20`	`PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;`
8	`IDP00008 gene: cysG; uroporphyrin-III C-methyltransferase BA_1445 [Bacillus anthracis str. Ames]`	`258`	`HGM_OVER`	`42-233`	`-4.150`	`8`	`HGC00166 gi\|163579340\|dbj\|BABE01005762.1\|1.0 TMP00473;`
9	`IDP00009 3-dehydroquinate synthase BA_1538 [Bacillus anthracis str. Ames]`	`363`	`HGM_OVER`	`76-165`	`-3.610`	`17`	`PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;`
10	`IDP00010 uroporphyrin-III C-methyltransferase, putative BA_2144 [Bacillus anthracis str. Ames]`	`474`	`HGM_OVER`	`43-233`	`-3.980`	`9`	`HGC00166 gi\|163579340\|dbj\|BABE01005762.1\|1.0 TMP00473;`
11	`IDP00011 alcohol dehydrogenase, iron-containing BA_2222 [Bacillus anthracis str. Ames]`	`392`	`HGM_OVER`	`40-89`	`-2.880`	`16`	`PB009661 _Gut.Meta.Jp.0000785_ gi\|162567239\|dbj\|BAAU01000237.1\|\|2 (- 3549:4008~0 complete)`
12	`IDP00012 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) BA_2953 [Bacillus anthracis str. Ames]`	`429`	`HGM_OVER`	`316-405`	`-2.740`	`15`	`PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]`
13	`IDP00013 LPXTG-motif cell wall anchor domain protein BA_3254 [Bacillus anthracis str. Ames]`	`372`	`HGM_OVER`	`59-190`	`-5.690`	`12`	`PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;`
14	`IDP00014 Protein recA (Recombinase A) BA_3915 [Bacillus anthracis str. Ames]`	`343`	`HGM_OVER`	`63-161`	`-5.710`	`14`	`PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;`
15	`IDP00015 UDP-N-acetylenolpyruvoylglucosamine reductase 1 (UDP-N-acetylmuramate dehydrogenase 1) BA_4048 [Bacillus anthracis str. Ames]`	`301`	`HGM_OVER`	`41-80`	`-4.140`	`7`	`PB009661 _Gut.Meta.Jp.0000785_ gi\|162567239\|dbj\|BAAU01000237.1\|\|2 (- 3549:4008~0 complete)`
16	`IDP00016 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase) (Meso-diaminopimelate-adding enzyme) (Meso-A2pm-adding enzyme) (UDP-N-acetylmuramyl-tripeptide synthetase) (UDP-MurNAc-tripeptide synthetase) BA_4053 [Bacillus anthracis str. Ames]`	`491`	`HGM_OVER`	`336-419`	`-3.250`	`15`	`PB031792 gi\|154174791\|ref\|YP_001409041.1\| flavodoxin family protein [Campylobacter curvus 525.92]gi\|112804021\|gb\|EAU01365.1\| flavodoxin family protein [Campylobacter curvus 525.92]`
17	`IDP00017 gene: ribBA; Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase); GTP cyclohydrolase-2 (GTP cyclohydrolase II)] BA_4333 [Bacillus anthracis str. Ames]`	`397`	`HGM_OVER`	`236-371`	`-4.080`	`14`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`
18	`IDP00018 gene: racE-2; glutamate racemase BA_4717 [Bacillus anthracis str. Ames]`	`269`	`HGM_OVER`	`7-115`	`-3.950`	`17`	`PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;`
19	`IDP00019 gene: pykA-2; pyruvate kinase BA_4843 [Bacillus anthracis str. Ames]`	`585`	`HGM_OVER`	`107-310`	`-2.610`	`12`	`PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;`
20	`IDP00020 UDP-N-acetylenolpyruvoylglucosamine reductase 2 (UDP-N-acetylmuramate dehydrogenase 2) BA_5315 [Bacillus anthracis str. Ames]`	`305`	`HGM_OVER`	`70-273`	`-4.630`	`9`	`PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;`