FFAS03 list of results E.coli / COG1018

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16127995|ref|NP_414542.1| thr operon leader peptide (thrL b0001 exp) [Escherichia coli str. K-12 substr. MG1655] 21 COG1018 1-21 -3.340 28 [N] COG5567 Predicted small periplasmic lipoprotein
2 gi|16127996|ref|NP_414543.1| fused aspartokinase I and homoserine dehydrogenase I (thrA b0002 exp) [Escherichia coli str. K-12 substr. MG1655] 820 COG1018 1-481 -112.000 26 [E] COG0527 Aspartokinases
456-820 -84.100 67 [E] COG0460 Homoserine dehydrogenase
3 gi|16127997|ref|NP_414544.1| homoserine kinase (thrB b0003 exp) [Escherichia coli str. K-12 substr. MG1655] 310 COG1018 2-310 -97.800 71 [E] COG0083 Homoserine kinase
4 gi|16127998|ref|NP_414545.1| threonine synthase (thrC b0004 exp) [Escherichia coli str. K-12 substr. MG1655] 428 COG1018 1-427 -103.000 28 [E] COG0498 Threonine synthase
5 gi|16127999|ref|NP_414546.1|(removed signal:1-23) predicted protein (yaaX b0005 exp) [Escherichia coli str. K-12 substr. MG1655] 75 COG1018 6-35 -7.900 20 [O] KOG1872 Ubiquitin-specific protease
6 gi|16128000|ref|NP_414547.1| conserved protein, UPF0246 family (yaaA b0006 exp) [Escherichia coli str. K-12 substr. MG1655] 258 COG1018 1-258 -111.000 99 [S] COG3022 Uncharacterized protein conserved in bacteria
7 gi|16128001|ref|NP_414548.1| predicted transporter (yaaJ b0007 exp) [Escherichia coli str. K-12 substr. MG1655] 476 COG1018 1-471 -124.000 41 [E] COG1115 Na+/alanine symporter
8 gi|16128002|ref|NP_414549.1| transaldolase B (talB b0008 exp) [Escherichia coli str. K-12 substr. MG1655] 317 COG1018 1-317 -104.000 89 [G] COG0176 Transaldolase
9 gi|16128003|ref|NP_414550.1| molybdochelatase incorporating molybdenum into molybdopterin (mog b0009 exp) [Escherichia coli str. K-12 substr. MG1655] 195 COG1018 2-191 -71.800 77 [H] COG0521 Molybdopterin biosynthesis enzymes
10 gi|16128004|ref|NP_414551.1| inner membrane protein, Grp1_Fun34_YaaH family (yaaH b0010 exp) [Escherichia coli str. K-12 substr. MG1655] 188 COG1018 3-184 -92.700 61 [S] COG1584 Predicted membrane protein
11 gi|16128005|ref|NP_414552.1| conserved protein, UPF0174 family (yaaW b0011 exp) [Escherichia coli str. K-12 substr. MG1655] 237 COG1018 1-237 -83.400 100 [S] COG4735 Uncharacterized protein conserved in bacteria
12 gi|16128007|ref|NP_414554.1|(removed signal:1-23) conserved protein, UPF0412 family (yaaI b0013 exp) [Escherichia coli str. K-12 substr. MG1655] 111 COG1018 2-111 -6.080 8 [S] COG4425 Predicted membrane protein
13 gi|16128008|ref|NP_414555.1| chaperone Hsp70, co-chaperone with DnaJ (dnaK b0014 exp) [Escherichia coli str. K-12 substr. MG1655] 638 COG1018 1-638 -163.000 56 [O] COG0443 Molecular chaperone
14 gi|16128009|ref|NP_414556.1| chaperone Hsp40, co-chaperone with DnaK (dnaJ b0015 exp) [Escherichia coli str. K-12 substr. MG1655] 376 COG1018 1-372 -121.000 59 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain
15 gi|16128010|ref|NP_414557.1| IS186 transposase (insL b0016 exp) [Escherichia coli str. K-12 substr. MG1655] 370 COG1018 1-357 -64.000 16 [L] COG3385 FOG: Transposase and inactivated derivatives
16 gi|16128012|ref|NP_414559.1| regulatory protein for HokC, overlaps CDS of hokC (mokC b0018 exp) [Escherichia coli str. K-12 substr. MG1655] 69 COG1018 17-68 -5.240 17 [NU] COG4726 Tfp pilus assembly protein PilX
17 gi|49175991|ref|YP_025292.1| toxic membrane protein, small (hokC b4412 exp) [Escherichia coli str. K-12 substr. MG1655] 50 COG1018 1-50 -5.190 15 [S] COG4929 Uncharacterized membrane-anchored protein
18 gi|16128013|ref|NP_414560.1| sodium-proton antiporter (nhaA b0019 exp) [Escherichia coli str. K-12 substr. MG1655] 388 COG1018 1-388 -122.000 100 [P] COG3004 Na+/H+ antiporter
19 gi|16128014|ref|NP_414561.1| DNA-binding transcriptional activator (nhaR b0020 exp) [Escherichia coli str. K-12 substr. MG1655] 301 COG1018 3-299 -53.700 16 [K] COG0583 Transcriptional regulator
20 gi|16128015|ref|NP_414562.1| IS1 transposase B (insB b0021 exp) [Escherichia coli str. K-12 substr. MG1655] 167 COG1018 12-166 -22.400 14 [L] COG3316 Transposase and inactivated derivatives
48-167 -70.600 28 [L] COG1662 Transposase and inactivated derivatives, IS1 family

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|16127995\|ref\|NP_414542.1\| thr operon leader peptide (thrL b0001 exp) [Escherichia coli str. K-12 substr. MG1655]`	`21`	`COG1018`	`1-21`	`-3.340`	`28`	`[N] COG5567 Predicted small periplasmic lipoprotein`
2	`gi\|16127996\|ref\|NP_414543.1\| fused aspartokinase I and homoserine dehydrogenase I (thrA b0002 exp) [Escherichia coli str. K-12 substr. MG1655]`	`820`	`COG1018`	`1-481`	`-112.000`	`26`	`[E] COG0527 Aspartokinases`
				`456-820`	`-84.100`	`67`	`[E] COG0460 Homoserine dehydrogenase`
3	`gi\|16127997\|ref\|NP_414544.1\| homoserine kinase (thrB b0003 exp) [Escherichia coli str. K-12 substr. MG1655]`	`310`	`COG1018`	`2-310`	`-97.800`	`71`	`[E] COG0083 Homoserine kinase`
4	`gi\|16127998\|ref\|NP_414545.1\| threonine synthase (thrC b0004 exp) [Escherichia coli str. K-12 substr. MG1655]`	`428`	`COG1018`	`1-427`	`-103.000`	`28`	`[E] COG0498 Threonine synthase`
5	`gi\|16127999\|ref\|NP_414546.1\|(removed signal:1-23) predicted protein (yaaX b0005 exp) [Escherichia coli str. K-12 substr. MG1655]`	`75`	`COG1018`	`6-35`	`-7.900`	`20`	`[O] KOG1872 Ubiquitin-specific protease`
6	`gi\|16128000\|ref\|NP_414547.1\| conserved protein, UPF0246 family (yaaA b0006 exp) [Escherichia coli str. K-12 substr. MG1655]`	`258`	`COG1018`	`1-258`	`-111.000`	`99`	`[S] COG3022 Uncharacterized protein conserved in bacteria`
7	`gi\|16128001\|ref\|NP_414548.1\| predicted transporter (yaaJ b0007 exp) [Escherichia coli str. K-12 substr. MG1655]`	`476`	`COG1018`	`1-471`	`-124.000`	`41`	`[E] COG1115 Na+/alanine symporter`
8	`gi\|16128002\|ref\|NP_414549.1\| transaldolase B (talB b0008 exp) [Escherichia coli str. K-12 substr. MG1655]`	`317`	`COG1018`	`1-317`	`-104.000`	`89`	`[G] COG0176 Transaldolase`
9	`gi\|16128003\|ref\|NP_414550.1\| molybdochelatase incorporating molybdenum into molybdopterin (mog b0009 exp) [Escherichia coli str. K-12 substr. MG1655]`	`195`	`COG1018`	`2-191`	`-71.800`	`77`	`[H] COG0521 Molybdopterin biosynthesis enzymes`
10	`gi\|16128004\|ref\|NP_414551.1\| inner membrane protein, Grp1_Fun34_YaaH family (yaaH b0010 exp) [Escherichia coli str. K-12 substr. MG1655]`	`188`	`COG1018`	`3-184`	`-92.700`	`61`	`[S] COG1584 Predicted membrane protein`
11	`gi\|16128005\|ref\|NP_414552.1\| conserved protein, UPF0174 family (yaaW b0011 exp) [Escherichia coli str. K-12 substr. MG1655]`	`237`	`COG1018`	`1-237`	`-83.400`	`100`	`[S] COG4735 Uncharacterized protein conserved in bacteria`
12	`gi\|16128007\|ref\|NP_414554.1\|(removed signal:1-23) conserved protein, UPF0412 family (yaaI b0013 exp) [Escherichia coli str. K-12 substr. MG1655]`	`111`	`COG1018`	`2-111`	`-6.080`	`8`	`[S] COG4425 Predicted membrane protein`
13	`gi\|16128008\|ref\|NP_414555.1\| chaperone Hsp70, co-chaperone with DnaJ (dnaK b0014 exp) [Escherichia coli str. K-12 substr. MG1655]`	`638`	`COG1018`	`1-638`	`-163.000`	`56`	`[O] COG0443 Molecular chaperone`
14	`gi\|16128009\|ref\|NP_414556.1\| chaperone Hsp40, co-chaperone with DnaK (dnaJ b0015 exp) [Escherichia coli str. K-12 substr. MG1655]`	`376`	`COG1018`	`1-372`	`-121.000`	`59`	`[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain`
15	`gi\|16128010\|ref\|NP_414557.1\| IS186 transposase (insL b0016 exp) [Escherichia coli str. K-12 substr. MG1655]`	`370`	`COG1018`	`1-357`	`-64.000`	`16`	`[L] COG3385 FOG: Transposase and inactivated derivatives`
16	`gi\|16128012\|ref\|NP_414559.1\| regulatory protein for HokC, overlaps CDS of hokC (mokC b0018 exp) [Escherichia coli str. K-12 substr. MG1655]`	`69`	`COG1018`	`17-68`	`-5.240`	`17`	`[NU] COG4726 Tfp pilus assembly protein PilX`
17	`gi\|49175991\|ref\|YP_025292.1\| toxic membrane protein, small (hokC b4412 exp) [Escherichia coli str. K-12 substr. MG1655]`	`50`	`COG1018`	`1-50`	`-5.190`	`15`	`[S] COG4929 Uncharacterized membrane-anchored protein`
18	`gi\|16128013\|ref\|NP_414560.1\| sodium-proton antiporter (nhaA b0019 exp) [Escherichia coli str. K-12 substr. MG1655]`	`388`	`COG1018`	`1-388`	`-122.000`	`100`	`[P] COG3004 Na+/H+ antiporter`
19	`gi\|16128014\|ref\|NP_414561.1\| DNA-binding transcriptional activator (nhaR b0020 exp) [Escherichia coli str. K-12 substr. MG1655]`	`301`	`COG1018`	`3-299`	`-53.700`	`16`	`[K] COG0583 Transcriptional regulator`
20	`gi\|16128015\|ref\|NP_414562.1\| IS1 transposase B (insB b0021 exp) [Escherichia coli str. K-12 substr. MG1655]`	`167`	`COG1018`	`12-166`	`-22.400`	`14`	`[L] COG3316 Transposase and inactivated derivatives`
				`48-167`	`-70.600`	`28`	`[L] COG1662 Transposase and inactivated derivatives, IS1 family`