FFAS03 list of results E.rectale / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|238922433|ref|YP_002935946.1| chromosomal replication initiation protein (EUBREC_0001) [Eubacterium rectale ATCC 33656] 453 HGM_OVER 111-444 -3.420 11 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
2 gi|238922434|ref|YP_002935947.1| DNA polymerase III, beta subunit (EUBREC_0002) [Eubacterium rectale ATCC 33656] 370 HGM_OVER 7-343 -4.700 8 PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]
3 gi|238922435|ref|YP_002935948.1| hypothetical protein (EUBREC_0003) [Eubacterium rectale ATCC 33656] 71 HGM_OVER 24-57 -3.390 20 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
4 gi|238922436|ref|YP_002935949.1| DNA replication and repair protein RecF (EUBREC_0004) [Eubacterium rectale ATCC 33656] 362 HGM_OVER 211-362 -3.540 10 PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;
5 gi|238922437|ref|YP_002935950.1| DNA gyrase, B subunit (EUBREC_0005) [Eubacterium rectale ATCC 33656] 645 HGM_OVER 296-641 -2.900 11 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
6 gi|238922438|ref|YP_002935951.1| DNA gyrase, A subunit (EUBREC_0006) [Eubacterium rectale ATCC 33656] 852 HGM_OVER 12-178 -1.910 14 HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;
7 gi|238922439|ref|YP_002935952.1| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EUBREC_0007) [Eubacterium rectale ATCC 33656] 281 HGM_OVER 2-109 -4.470 9 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;
8 gi|238922440|ref|YP_002935953.1| hypothetical protein (EUBREC_0008) [Eubacterium rectale ATCC 33656] 47 HGM_OVER 17-46 -1.850 13 PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]
9 gi|238922441|ref|YP_002935954.1| fumarate hydratase subunit B (EUBREC_0009) [Eubacterium rectale ATCC 33656] 183 HGM_OVER 6-59 -2.850 11 PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;
10 gi|238922442|ref|YP_002935955.1| putative oxidoreductase (EUBREC_0016) [Eubacterium rectale ATCC 33656] 329 HGM_OVER 118-243 -2.840 13 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
11 gi|238922443|ref|YP_002935956.1| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656] 247 HGM_OVER 1-138 -7.130 14 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
12 gi|238922444|ref|YP_002935957.1| fructose-1-phosphate kinase (EUBREC_0018) [Eubacterium rectale ATCC 33656] 305 HGM_OVER 90-252 -3.280 11 PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;
13 gi|238922445|ref|YP_002935958.1| PTS system, fructose-specific, IIABC component (EUBREC_0019) [Eubacterium rectale ATCC 33656] 642 HGM_OVER 112-276 -4.650 12 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
14 gi|238922446|ref|YP_002935959.1| chaperone protein DnaK (EUBREC_0020) [Eubacterium rectale ATCC 33656] 586 HGM_OVER 91-472 -7.910 10 PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
15 gi|238922447|ref|YP_002935960.1| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656] 290 HGM_OVER 2-127 -4.270 14 PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
16 gi|238922448|ref|YP_002935961.1| DNA-binding response regulator (EUBREC_0022) [Eubacterium rectale ATCC 33656] 230 HGM_OVER 57-153 -3.660 14 PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)
17 gi|238922449|ref|YP_002935962.1|(removed signalp:1-29) hypothetical protein (EUBREC_0023) [Eubacterium rectale ATCC 33656] 428 HGM_OVER 169-390 -3.710 10 PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;
18 gi|238922450|ref|YP_002935963.1| hypothetical protein (EUBREC_0024) [Eubacterium rectale ATCC 33656] 761 HGM_OVER 348-455 -2.760 12 HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
19 gi|238922451|ref|YP_002935964.1| hypothetical protein (EUBREC_0025) [Eubacterium rectale ATCC 33656] 437 HGM_OVER 232-389 -6.590 8 HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
20 gi|238922452|ref|YP_002935965.1| hypothetical protein (EUBREC_0026) [Eubacterium rectale ATCC 33656] 877 HGM_OVER 643-876 -4.750 12 PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|238922433\|ref\|YP_002935946.1\| chromosomal replication initiation protein (EUBREC_0001) [Eubacterium rectale ATCC 33656]`	`453`	`HGM_OVER`	`111-444`	`-3.420`	`11`	`PB005684 gi\|160884252\|ref\|ZP_02065255.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi\|156109991\|gb\|EDO11736.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]`
2	`gi\|238922434\|ref\|YP_002935947.1\| DNA polymerase III, beta subunit (EUBREC_0002) [Eubacterium rectale ATCC 33656]`	`370`	`HGM_OVER`	`7-343`	`-4.700`	`8`	`PB004476 gi\|139436894\|ref\|ZP_01771054.1\| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi\|133776541\|gb\|EBA40361.1\| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]`
3	`gi\|238922435\|ref\|YP_002935948.1\| hypothetical protein (EUBREC_0003) [Eubacterium rectale ATCC 33656]`	`71`	`HGM_OVER`	`24-57`	`-3.390`	`20`	`PB015266 gi\|154494998\|ref\|ZP_02034003.1\| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi\|154085548\|gb\|EDN84593.1\| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]`
4	`gi\|238922436\|ref\|YP_002935949.1\| DNA replication and repair protein RecF (EUBREC_0004) [Eubacterium rectale ATCC 33656]`	`362`	`HGM_OVER`	`211-362`	`-3.540`	`10`	`PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051;`
5	`gi\|238922437\|ref\|YP_002935950.1\| DNA gyrase, B subunit (EUBREC_0005) [Eubacterium rectale ATCC 33656]`	`645`	`HGM_OVER`	`296-641`	`-2.900`	`11`	`PB005684 gi\|160884252\|ref\|ZP_02065255.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi\|156109991\|gb\|EDO11736.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]`
6	`gi\|238922438\|ref\|YP_002935951.1\| DNA gyrase, A subunit (EUBREC_0006) [Eubacterium rectale ATCC 33656]`	`852`	`HGM_OVER`	`12-178`	`-1.910`	`14`	`HGC00690 gi\|162868815\|dbj\|BABB01001192.1\|3.0 TMP00870;`
7	`gi\|238922439\|ref\|YP_002935952.1\| hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EUBREC_0007) [Eubacterium rectale ATCC 33656]`	`281`	`HGM_OVER`	`2-109`	`-4.470`	`9`	`HGC00573 gi\|163306732\|dbj\|BABD01003960.1\|2.0 TMP00669;`
8	`gi\|238922440\|ref\|YP_002935953.1\| hypothetical protein (EUBREC_0008) [Eubacterium rectale ATCC 33656]`	`47`	`HGM_OVER`	`17-46`	`-1.850`	`13`	`PB009534 gi\|153852721\|ref\|ZP_01994158.1\| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi\|149754363\|gb\|EDM64294.1\| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]`
9	`gi\|238922441\|ref\|YP_002935954.1\| fumarate hydratase subunit B (EUBREC_0009) [Eubacterium rectale ATCC 33656]`	`183`	`HGM_OVER`	`6-59`	`-2.850`	`11`	`PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;`
10	`gi\|238922442\|ref\|YP_002935955.1\| putative oxidoreductase (EUBREC_0016) [Eubacterium rectale ATCC 33656]`	`329`	`HGM_OVER`	`118-243`	`-2.840`	`13`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`
11	`gi\|238922443\|ref\|YP_002935956.1\| transcription repressor of fructose operon FruR (EUBREC_0017) [Eubacterium rectale ATCC 33656]`	`247`	`HGM_OVER`	`1-138`	`-7.130`	`14`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`
12	`gi\|238922444\|ref\|YP_002935957.1\| fructose-1-phosphate kinase (EUBREC_0018) [Eubacterium rectale ATCC 33656]`	`305`	`HGM_OVER`	`90-252`	`-3.280`	`11`	`PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;`
13	`gi\|238922445\|ref\|YP_002935958.1\| PTS system, fructose-specific, IIABC component (EUBREC_0019) [Eubacterium rectale ATCC 33656]`	`642`	`HGM_OVER`	`112-276`	`-4.650`	`12`	`PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;`
14	`gi\|238922446\|ref\|YP_002935959.1\| chaperone protein DnaK (EUBREC_0020) [Eubacterium rectale ATCC 33656]`	`586`	`HGM_OVER`	`91-472`	`-7.910`	`10`	`PB162065 _Gut.Meta.Jp.0089312_ gi\|162832207\|dbj\|BABA01012502.1\|\|1 (- 0:1326~0 complete)`
15	`gi\|238922447\|ref\|YP_002935960.1\| hypothetical protein (EUBREC_0021) [Eubacterium rectale ATCC 33656]`	`290`	`HGM_OVER`	`2-127`	`-4.270`	`14`	`PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;`
16	`gi\|238922448\|ref\|YP_002935961.1\| DNA-binding response regulator (EUBREC_0022) [Eubacterium rectale ATCC 33656]`	`230`	`HGM_OVER`	`57-153`	`-3.660`	`14`	`PB039305 _Gut.Meta.Jp.0057508_ gi\|162726131\|dbj\|BAAY01002830.1\|\|2 (- 1092:1581~0 complete)`
17	`gi\|238922449\|ref\|YP_002935962.1\|(removed signalp:1-29) hypothetical protein (EUBREC_0023) [Eubacterium rectale ATCC 33656]`	`428`	`HGM_OVER`	`169-390`	`-3.710`	`10`	`PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;`
18	`gi\|238922450\|ref\|YP_002935963.1\| hypothetical protein (EUBREC_0024) [Eubacterium rectale ATCC 33656]`	`761`	`HGM_OVER`	`348-455`	`-2.760`	`12`	`HGC00991 gi\|163600283\|dbj\|BABF01000984.1\|3.0 TMP01348;`
19	`gi\|238922451\|ref\|YP_002935964.1\| hypothetical protein (EUBREC_0025) [Eubacterium rectale ATCC 33656]`	`437`	`HGM_OVER`	`232-389`	`-6.590`	`8`	`HGC00928 gi\|162868028\|dbj\|BABB01001979.1\|3.0 TMP01255;`
20	`gi\|238922452\|ref\|YP_002935965.1\| hypothetical protein (EUBREC_0026) [Eubacterium rectale ATCC 33656]`	`877`	`HGM_OVER`	`643-876`	`-4.750`	`12`	`PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;`