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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 3769< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|238922453|ref|YP_002935966.1| 1,4-alpha-glucan branching enzyme (EUBREC_0027) [Eubacterium rectale ATCC 33656] 657 HGM_OVER 166-421 -4.510 14  PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;
22 gi|238922454|ref|YP_002935967.1| hypothetical protein (EUBREC_0028) [Eubacterium rectale ATCC 33656] 500 HGM_OVER 165-307 -3.750 10  HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
23 gi|238922454|ref|YP_002935967.1| hypothetical protein (EUBREC_0028) [Eubacterium rectale ATCC 33656] 500 HGM_OVER 306-435 -2.680 9  HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
24 gi|238922454|ref|YP_002935967.1| hypothetical protein (EUBREC_0028) [Eubacterium rectale ATCC 33656] 500 HGM_OVER 1-99 -5.010 13  HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;
25 gi|238922454|ref|YP_002935967.1| hypothetical protein (EUBREC_0028) [Eubacterium rectale ATCC 33656] 296 HGM_OVER 40-234 -4.120 9  PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;
26 gi|238922455|ref|YP_002935968.1|(removed signalp:1-34) germination-specific N-acetylmuramoyl-L-alanine amidase (EUBREC_0029) [Eubacterium rectale ATCC 33656] 206 HGM_OVER 29-196 -3.090 9  HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;
27 gi|238922456|ref|YP_002935969.1|(removed signalp:1-28) hypothetical protein (EUBREC_0030) [Eubacterium rectale ATCC 33656] 549 HGM_OVER 304-531 -3.950 11  PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)
28 gi|238922457|ref|YP_002935970.1| hypothetical protein (EUBREC_0031) [Eubacterium rectale ATCC 33656] 55 HGM_OVER 4-50 -5.020 17  PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;
29 gi|238922458|ref|YP_002935971.1| hypothetical protein (EUBREC_0032) [Eubacterium rectale ATCC 33656] 156 HGM_OVER 1-79 -4.140 16  PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;
30 gi|238922459|ref|YP_002935972.1| serine/threonine protein kinase fused to TPR repeats domain (EUBREC_0033) [Eubacterium rectale ATCC 33656] 421 HGM_OVER 43-208 -5.060 10  PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
31 gi|238922460|ref|YP_002935973.1| hypothetical protein (EUBREC_0034) [Eubacterium rectale ATCC 33656] 92 HGM_OVER 20-92 -5.030 19  HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
32 gi|238922461|ref|YP_002935974.1| hypothetical protein (EUBREC_0035) [Eubacterium rectale ATCC 33656] 246 HGM_OVER 1-77 -3.360 14  PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;
33 gi|238922462|ref|YP_002935975.1| hypothetical protein (EUBREC_0036) [Eubacterium rectale ATCC 33656] 69 HGM_OVER 1-69 -2.920 5  HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
34 gi|238922463|ref|YP_002935976.1| flagellin (EUBREC_0037) [Eubacterium rectale ATCC 33656] 476 HGM_OVER 4-92 -4.120 15  PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
35 gi|238922464|ref|YP_002935977.1| hypothetical protein (EUBREC_0038) [Eubacterium rectale ATCC 33656] 157 HGM_OVER 7-118 -4.850 13  PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF
36 gi|238922465|ref|YP_002935978.1| hypothetical protein (EUBREC_0039) [Eubacterium rectale ATCC 33656] 70 HGM_OVER 38-68 -3.390 16  PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876;
37 gi|238922466|ref|YP_002935979.1| hypothetical protein (EUBREC_0040) [Eubacterium rectale ATCC 33656] 162 HGM_OVER 88-155 -5.780 4  PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]
38 gi|238922467|ref|YP_002935980.1| hypothetical protein (EUBREC_0041) [Eubacterium rectale ATCC 33656] 332 HGM_OVER 134-279 -3.560 11  PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443;
39 gi|238922468|ref|YP_002935981.1| Flp pilus assembly protein (EUBREC_0042) [Eubacterium rectale ATCC 33656] 405 HGM_OVER 187-325 -3.530 10  PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
40 gi|238922469|ref|YP_002935982.1| hypothetical protein (EUBREC_0043) [Eubacterium rectale ATCC 33656] 258 HGM_OVER 50-232 -4.210 5  PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.