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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 55674< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 300 PDB1018 10-178 -19.900 14  1u5e_A mol:protein length:211 Src-associated adaptor protein
74-300 -39.700 83  2rlo_A mol:protein length:128 Centaurin-gamma 1
22 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 300 PDB1018 19-170 -16.800 11  2z0o_A mol:protein length:387 DCC-interacting protein 13-alpha
55-180 -20.200 14  5c6r_A mol:protein length:150 Arf-GAP
153-300 -63.800 36  3t9k_A mol:protein length:390 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1,Peptide from Integrin beta-1
23 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 292 PDB1018 28-291 -91.100 27  1dcq_A mol:protein length:278 PYK2-ASSOCIATED PROTEIN BETA
24 sp|P52895|AK1C2_HUMAN Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3 323 PDB1018 1-323 -125.000 87  6A7B Entity 1(prereleased)
25 sp|P05062|ALDOB_HUMAN Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2 364 PDB1018 1-364 -142.000 70  1xfb_A mol:protein length:365 Aldolase C
26 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 PDB1018 1-300 -11.200 5ife_C mol:protein length:1304 Splicing factor 3B subunit 1
27 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 PDB1018 196-300 -7.670 19  3k8w_A mol:protein length:326 Flagellin homolog
28 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 PDB1018 114-193 -7.610 20  5wjb_A mol:protein length:137 Capsid assembly scaffolding protein,Myosin-7
29 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 PDB1018 1-204 -7.220 17  6f1u_X mol:protein length:577 BICD family-like cargo adapter 1
30 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 179 PDB1018 17-172 -12.600 12  3gdb_A mol:protein length:937 Putative uncharacterized protein spr0440
31 sp|O43827|ANGL7_HUMAN(removed signalp:1-26) Angiopoietin-related protein 7 OS=Homo sapiens GN=ANGPTL7 PE=1 SV=1 320 PDB1018 1-320 -83.500 30  1ei3_C mol:protein length:409 FIBRINOGEN
31-316 -87.800 33  1lwu_B mol:protein length:323 Fibrinogen beta chain
95-320 -97.000 43  4zfg_A mol:protein length:232 Angiopoietin-2
32 sp|Q8N6D5|ANR29_HUMAN Ankyrin repeat domain-containing protein 29 OS=Homo sapiens GN=ANKRD29 PE=2 SV=2 301 PDB1018 1-296 -81.200 33  5le3_A mol:protein length:317 DD_D12_09_D12
33 sp|P56377|AP1S2_HUMAN AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1 157 PDB1018 1-157 -78.000 87  1w63_Q mol:protein length:158 ADAPTER-RELATED PROTEIN COMPLEX 1 SIGMA 1A SUBUNIT
34 sp|Q6Q788|APOA5_HUMAN(removed signalp:1-23) Apolipoprotein A-V OS=Homo sapiens GN=APOA5 PE=1 SV=1 343 PDB1018 6-342 -14.500 2bsg_A mol:protein length:487 FIBRITIN
12-314 -32.300 13  2l7b_A mol:protein length:307 Apolipoprotein E
44-317 -32.700 18  3s84_A mol:protein length:273 Apolipoprotein A-IV
35 sp|P15514|AREG_HUMAN(removed signalp:1-26) Amphiregulin OS=Homo sapiens GN=AREG PE=1 SV=2 226 PDB1018 76-159 -26.000 34  1xdt_R mol:protein length:79 HEPARIN-BINDING EPIDERMAL GROWTH FACTOR
108-193 -15.800 13  4k0v_A mol:protein length:529 TEK tyrosine kinase variant
118-226 -10.100 15  3r05_A mol:protein length:1254 Neurexin-1-alpha
36 sp|Q8N8L6|ARL10_HUMAN(removed signalp:1-21) ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1 223 PDB1018 44-217 -75.300 32  6fae_B mol:protein length:213 ADP-ribosylation factor 1
37 sp|Q8TBH0|ARRD2_HUMAN Arrestin domain-containing protein 2 OS=Homo sapiens GN=ARRDC2 PE=2 SV=2 407 PDB1018 2-322 -85.700 36  4ll1_A mol:protein length:315 Thioredoxin-interacting protein
2-390 -54.300 14  1jsy_A mol:protein length:418 Bovine arrestin-2 (full length)
38 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 PDB1018 45-105 -8.600 19  5h1s_g mol:protein length:142 50S ribosomal protein 5 alpha, chloroplastic
39 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 PDB1018 80-258 -5.040 15  1lm5_A mol:protein length:214 subdomain of Desmoplakin Carboxy-Terminal domain (DPCT)
40 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 PDB1018 192-298 -15.900 11  2mk0_A mol:protein length:120 HEP200 protein


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.