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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 55674< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 300 VFDB 1-299 -27.100 26  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
22 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 300 VFDB 1-300 -70.500 41  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
23 sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 292 VFDB 1-252 -84.200 59  [T] KOG0705 GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains)
37-288 -86.600 27  [T] KOG0818 GTPase-activating proteins of the GIT family
24 sp|P52895|AK1C2_HUMAN Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3 323 VFDB 5-323 -120.000 48  [R] KOG1577 Aldo/keto reductase family proteins
25 sp|P05062|ALDOB_HUMAN Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2 364 VFDB 1-364 -143.000 69  [G] KOG1557 Fructose-biphosphate aldolase
26 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 VFDB 1-300 -10.600 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
27 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 VFDB 172-285 -8.740 24  [OT] KOG0505 Myosin phosphatase, regulatory subunit
28 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 VFDB 1-298 -10.200 [U] KOG0946 ER-Golgi vesicle-tethering protein p115
29 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 300 VFDB 1-209 -8.710 13  [U] KOG0946 ER-Golgi vesicle-tethering protein p115
30 sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens GN=AMOTL2 PE=1 SV=3 179 VFDB 13-173 -11.600 [A] KOG2242 Scaffold/matrix specific factor hnRNP-U/SAF-A, contains SPRY domain
31 sp|O43827|ANGL7_HUMAN(removed signalp:1-26) Angiopoietin-related protein 7 OS=Homo sapiens GN=ANGPTL7 PE=1 SV=1 320 VFDB 4-319 -85.200 32  [R] KOG2579 Ficolin and related extracellular proteins
32 sp|Q8N6D5|ANR29_HUMAN Ankyrin repeat domain-containing protein 29 OS=Homo sapiens GN=ANKRD29 PE=2 SV=2 301 VFDB 14-301 -64.100 17  [R] KOG0508 Ankyrin repeat protein
37-265 -72.000 27  [O] KOG4412 26S proteasome regulatory complex, subunit PSMD10
33 sp|P56377|AP1S2_HUMAN AP-1 complex subunit sigma-2 OS=Homo sapiens GN=AP1S2 PE=1 SV=1 157 VFDB 1-157 -75.400 70  [U] KOG0934 Clathrin adaptor complex, small subunit
34 sp|Q6Q788|APOA5_HUMAN(removed signalp:1-23) Apolipoprotein A-V OS=Homo sapiens GN=APOA5 PE=1 SV=1 343 VFDB 2-337 -14.000 [S] COG5412 Phage-related protein
26-297 -19.500 10  [S] KOG4744 Uncharacterized conserved protein
35 sp|P15514|AREG_HUMAN(removed signalp:1-26) Amphiregulin OS=Homo sapiens GN=AREG PE=1 SV=2 226 VFDB 120-221 -10.400 10  [R] COG5084 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins
36 sp|Q8N8L6|ARL10_HUMAN(removed signalp:1-21) ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1 223 VFDB 40-217 -73.800 31  [U] KOG0070 GTP-binding ADP-ribosylation factor Arf1
37 sp|Q8TBH0|ARRD2_HUMAN Arrestin domain-containing protein 2 OS=Homo sapiens GN=ARRDC2 PE=2 SV=2 407 VFDB 1-406 -93.400 53  [R] KOG3780 Thioredoxin binding protein TBP-2/VDUP1
38 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 VFDB 2-294 -9.960 10  [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
45-300 -10.300 [O] KOG0802 E3 ubiquitin ligase
39 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 VFDB 91-204 -5.250 18  [M] COG1664 Integral membrane protein CcmA involved in cell shape determination
40 sp|Q9NR48|ASH1L_HUMAN Probable histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 300 VFDB 23-290 -14.700 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.