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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 539< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|12044870|ref|NP_072680.1| proline iminopeptidase (MG_020) [Mycoplasma genitalium G37] 308 COG1018 5-308 -50.600 20  [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
22 gi|12044871|ref|NP_072681.1| methionyl-tRNA synthetase (MG_021) [Mycoplasma genitalium G37] 512 COG1018 2-512 -148.000 22  [J] KOG1247 Methionyl-tRNA synthetase
23 gi|12044872|ref|NP_072682.1| DNA-directed RNA polymerase subunit delta (MG_022) [Mycoplasma genitalium G37] 145 COG1018 2-145 -41.300 19  [K] COG3343 DNA-directed RNA polymerase, delta subunit
24 gi|12044873|ref|NP_072683.1| fructose-1,6-bisphosphate aldolase, class II (MG_023) [Mycoplasma genitalium G37] 288 COG1018 1-287 -82.500 30  [G] KOG4153 Fructose 1,6-bisphosphate aldolase
25 gi|12044874|ref|NP_072684.1| GTP-dependent nucleic acid-binding protein EngD (MG_024) [Mycoplasma genitalium G37] 367 COG1018 1-367 -122.000 37  [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
26 gi|12044875|ref|NP_072685.1| glycosyl transferase, group 2 family protein (MG_025) [Mycoplasma genitalium G37] 298 COG1018 2-296 -15.300 10  [G] KOG1413 N-acetylglucosaminyltransferase I
5-224 -47.300 16  [M] COG0463 Glycosyltransferases involved in cell wall biogenesis
27 gi|12044876|ref|NP_072686.1| elongation factor P (MG_026) [Mycoplasma genitalium G37] 190 COG1018 4-188 -93.800 37  [J] COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
28 gi|12044877|ref|NP_072687.1| transcription termination/antitermination protein NusB (MG_027) [Mycoplasma genitalium G37] 151 COG1018 4-151 -66.000 16  [K] COG0781 Transcription termination factor
29 gi|12044878|ref|NP_072688.1| hypothetical protein (MG_028) [Mycoplasma genitalium G37] 201 COG1018 4-176 -10.700 12  [R] COG2389 Uncharacterized metal-binding protein
30 gi|12044879|ref|NP_072689.1| DJ-1/PfpI family protein (MG_029) [Mycoplasma genitalium G37] 186 COG1018 2-181 -58.800 18  [RV] KOG2764 Putative transcriptional regulator DJ-1
31 gi|12044880|ref|NP_072690.1| uracil phosphoribosyltransferase (MG_030) [Mycoplasma genitalium G37] 206 COG1018 2-206 -93.800 42  [F] COG0035 Uracil phosphoribosyltransferase
32 gi|12044881|ref|NP_072691.1| DNA polymerase III PolC (MG_031) [Mycoplasma genitalium G37] 500 COG1018 8-500 -48.700 21  [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
33 gi|12044881|ref|NP_072691.1| DNA polymerase III PolC (MG_031) [Mycoplasma genitalium G37] 500 COG1018 1-500 -59.700 30  [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
156-382 -62.700 22  [L] COG0847 DNA polymerase III, epsilon subunit and related 3`-5` exonucleases
34 gi|12044881|ref|NP_072691.1| DNA polymerase III PolC (MG_031) [Mycoplasma genitalium G37] 500 COG1018 1-500 -81.000 35  [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
35 gi|12044881|ref|NP_072691.1| DNA polymerase III PolC (MG_031) [Mycoplasma genitalium G37] 500 COG1018 1-500 -90.900 46  [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
36 gi|12044881|ref|NP_072691.1| DNA polymerase III PolC (MG_031) [Mycoplasma genitalium G37] 451 COG1018 1-451 -83.900 44  [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type)
37 gi|12044882|ref|NP_072692.1| hypothetical protein (MG_032) [Mycoplasma genitalium G37] 666 COG1018 53-395 -6.690 12  [R] KOG4403 Cell surface glycoprotein STIM, contains SAM domain
38 gi|12044883|ref|NP_072693.1|(removed signalp:1-32) glycerol uptake facilitator (MG_033) [Mycoplasma genitalium G37] 226 COG1018 3-222 -77.700 20  [G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)
39 gi|12044884|ref|NP_072694.1| thymidine kinase (MG_034) [Mycoplasma genitalium G37] 213 COG1018 1-213 -10.800 13  [U] COG3267 Type II secretory pathway, component ExeA (predicted ATPase)
12-193 -74.100 26  [F] COG1435 Thymidine kinase
40 gi|12044885|ref|NP_072695.1| histidyl-tRNA synthetase (MG_035) [Mycoplasma genitalium G37] 414 COG1018 3-412 -122.000 34  [J] COG0124 Histidyl-tRNA synthetase


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.