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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 689< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|13507760|ref|NP_109709.1| heat shock protein DnaJ MPN021 [Mycoplasma pneumoniae M129] 390 PDB1018 2-378 -91.100 26  3lz8_A mol:protein length:329 Putative chaperone DnaJ
22 gi|13507761|ref|NP_109710.1| proline iminopeptidase MPN022 [Mycoplasma pneumoniae M129] 309 PDB1018 2-309 -84.400 33  1qtr_A mol:protein length:317 PROLYL AMINOPEPTIDASE
23 gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase MPN023 [Mycoplasma pneumoniae M129] 512 PDB1018 2-512 -152.000 31  2d54_A mol:protein length:502 Methionyl-tRNA synthetase
24 gi|13507763|ref|NP_109712.1| DNA-directed RNA polymerase subunit delta MPN024 [Mycoplasma pneumoniae M129] 146 PDB1018 2-146 -42.900 18  2m4k_A mol:protein length:172 DNA-directed RNA polymerase subunit delta
25 gi|13507764|ref|NP_109713.1| fructose-bisphosphate aldolase MPN025 [Mycoplasma pneumoniae M129] 288 PDB1018 2-288 -92.600 30  1gvf_A mol:protein length:286 TAGATOSE-BISPHOSPHATE ALDOLASE AGAY
26 gi|13507765|ref|NP_109714.1| translation-associated GTPase MPN026 [Mycoplasma pneumoniae M129] 362 PDB1018 1-362 -124.000 42  2dby_A mol:protein length:368 GTP-binding protein
27 gi|13507766|ref|NP_109715.1| hypothetical protein MPN027 [Mycoplasma pneumoniae M129] 274 PDB1018 25-227 -10.800 17  3tcv_A mol:protein length:246 GCN5-related N-acetyltransferase
26-165 -13.200 14  3r95_A mol:protein length:188 MccE protein
28 gi|13507767|ref|NP_109716.1| sugar transferase MPN028 [Mycoplasma pneumoniae M129] 299 PDB1018 1-284 -78.200 18  5hea_A mol:protein length:296 Putative glycosyltransferase (GalT1)
29 gi|13507768|ref|NP_109717.1| elongation factor P MPN029 [Mycoplasma pneumoniae M129] 190 PDB1018 3-189 -93.300 25  3tre_A mol:protein length:191 Elongation factor P
30 gi|13507769|ref|NP_109718.1| hypothetical protein MPN030 [Mycoplasma pneumoniae M129] 168 PDB1018 19-168 -78.600 72  1q8c_A mol:protein length:151 Hypothetical protein MG027
31 gi|13507770|ref|NP_109719.1|(removed signal:1-29) hypothetical protein MPN031 [Mycoplasma pneumoniae M129] 174 PDB1018 4-164 -9.030 14  5irx_A mol:protein length:636 Transient receptor potential cation channel subfamily V member 1
32 gi|13507771|ref|NP_109720.1| hydrolase MPN032 [Mycoplasma pneumoniae M129] 108 PDB1018 2-108 -53.200 27  4e08_A mol:protein length:190 DJ-1 beta
33 gi|13507772|ref|NP_109721.1| uracil phosphoribosyltransferase MPN033 [Mycoplasma pneumoniae M129] 206 PDB1018 1-206 -98.600 39  5e38_A mol:protein length:216 Uracil phosphoribosyltransferase
34 gi|13507773|ref|NP_109722.1| DNA polymerase III PolC MPN034 [Mycoplasma pneumoniae M129] 1443 PDB1018 147-1414 -13.300 3jcm_A mol:protein length:2413 Pre-mRNA-splicing factor 8
206-1440 -196.000 40  3f2b_A mol:protein length:1041 DNA-directed DNA polymerase III alpha chain
35 gi|13507774|ref|NP_109723.1|(removed signal:1-22) hypothetical protein MPN035 [Mycoplasma pneumoniae M129] 644 PDB1018 1-366 -7.790 13  4a0k_A mol:protein length:742 CULLIN-4A
36 gi|13507775|ref|NP_109724.1|(removed signal:1-17) hypothetical protein MPN036 [Mycoplasma pneumoniae M129] 656 PDB1018 3-374 -7.400 12  4a0k_A mol:protein length:742 CULLIN-4A
37 gi|13507776|ref|NP_109725.1| hypothetical protein MPN037 [Mycoplasma pneumoniae M129] 147 PDB1018 1-146 -7.650 17  5gpn_e mol:protein length:318 NADH-ubiquinone oxidoreductase chain 1
38 gi|13507777|ref|NP_109726.1| hypothetical protein MPN038 [Mycoplasma pneumoniae M129] 116 PDB1018 31-115 -35.000 51  2ba2_A mol:protein length:85 Hypothetical UPF0134 protein MPN010
39 gi|13507778|ref|NP_109727.1|(removed signal:1-24) hypothetical protein MPN039 [Mycoplasma pneumoniae M129] 314 PDB1018 2-255 -5.910 1eg3_A mol:protein length:261 DYSTROPHIN
40 gi|13507779|ref|NP_109728.1|(removed signal:1-45) hypothetical protein MPN040 [Mycoplasma pneumoniae M129] 58 PDB1018 14-55 -6.450 33  6ek1_A mol:protein length:312 restriction endonuclease PfoI


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Jambon M, Godzik A. New avenues in protein function prediction. Protein Sci. 2006 Jun;15(6):1527-9.