FFAS03 list of results M.tuberculosis / CSGID

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4372 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15607143|ref|NP_214515.1| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv] 507 CSGID 6-502 -117.000 47 IDP00004 Chromosomal replication initiator protein dnaA BA_0001 [Bacillus anthracis str. Ames]
2 gi|15607144|ref|NP_214516.1| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv] 402 CSGID 13-400 -97.100 29 IDP90614 DNA polymerase III subunit beta [Vibrio cholerae O1 biovar eltor str. N16961] VC0013 [Vibrio cholerae O1 biovar El Tor str. N16961]
3 gi|15607145|ref|NP_214517.1| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv] 385 CSGID 1-377 -101.000 25 IDP00109 gene: recF; Rec protein NT01SF4517 [Shigella flexneri 2a str. 2457T]
4 gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv] 187 CSGID 52-165 -42.200 14 IDP90373 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_191 [Chlamydia trachomatis D/UW-3/CX]
5 gi|15607147|ref|NP_214519.1| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv] 714 CSGID 5-714 -82.600 34 IDP92137 DNA gyrase subunit B, putative [Toxoplasma gondii ME49] TGME49_097780 [Toxoplasma gondii ME49]
37-714 -192.000 51 IDP02606 gene: gyrB; DNA gyrase subunit B [Listeria monocytogenes EGD-e] lmo0006 [Listeria monocytogenes EGD-e]
6 gi|15607148|ref|NP_214520.1| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv] 838 CSGID 9-838 -167.000 46 IDP90834 DNA gyrase, subunit A [Vibrio cholerae O1 biovar eltor str. N16961] VC1258 [Vibrio cholerae O1 biovar El Tor str. N16961]
7 gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv] 304 CSGID 1-294 -11.300 10 IDP91949 pneumococcal histidine triad protein E [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007099 [Streptococcus pneumoniae str. Canada MDR_19A]
8 gi|15607150|ref|NP_214522.1| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv] 145 CSGID 7-133 -6.430 26 IDP90283 gene: GRA6; granule antigen protein GRA6 [Toxoplasma gondii] TGME49_075440 [Toxoplasma gondii]
9 gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv] 182 CSGID 13-173 -84.000 41 IDP01228 peptidyl-prolyl cis-trans isomerase, cyclophilin-type BA_4283 [Bacillus anthracis str. Ames]
10 gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv] 141 CSGID 18-141 -6.160 11 IDP95308 hypothetical protein VCA0021 [Vibrio cholerae O1 biovar El Tor str. N16961] NP_232422 [Vibrio cholerae O1 biovar El Tor str. N16961]
11 gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv] 93 CSGID 3-59 -5.620 9 IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames]
12 gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv] 262 CSGID 22-256 -70.300 15 IDP05645 hypothetical protein CD3297 [Clostridium difficile 630] CD3297 [Peptoclostridium difficile 630]
13 gi|57116682|ref|YP_177615.1| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv] 232 CSGID 1-232 -102.000 100 IDP06559 anthranilate synthase component II [Mycobacterium tuberculosis H37Rv] YP_177615 [Mycobacterium tuberculosis H37Rv]
14 gi|15607156|ref|NP_214528.1| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv] 626 CSGID 1-626 -138.000 27 IDP06302 serine/threonine protein kinase [Streptococcus pneumoniae TIGR4] NP_346168 [Streptococcus pneumoniae TIGR4]
15 gi|15607157|ref|NP_214529.1| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv] 431 CSGID 4-427 -101.000 28 IDP06302 serine/threonine protein kinase [Streptococcus pneumoniae TIGR4] NP_346168 [Streptococcus pneumoniae TIGR4]
16 gi|15607158|ref|NP_214530.1|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv] 461 CSGID 12-458 -101.000 23 IDP00345 hypothetical protein lmo0441 lmo0441 [Listeria monocytogenes EGD-e]
17 gi|15607159|ref|NP_214531.1|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv] 434 CSGID 12-414 -15.200 12 IDP91390 Lipid A core - O-antigen ligase [Vibrio vulnificus CMCP6] VV1_1426 [Vibrio vulnificus CMCP6]
18 gi|15607160|ref|NP_214532.1| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv] 514 CSGID 8-248 -82.000 34 IDP02614 hypothetical protein lmo1821 [Listeria monocytogenes EGD-e] lmo1821 [Listeria monocytogenes EGD-e]
12-419 -25.800 14 IDP92014 protein phosphatase 2C, putative [Toxoplasma gondii ME49] TGME49_067100 [Toxoplasma gondii ME49]
19 gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv] 155 CSGID 63-154 -31.000 17 IDP92663 hypothetical protein BB0811 [Bordetella bronchiseptica RB50] NP_887360 [Bordetella bronchiseptica RB50]
20 gi|15607162|ref|NP_214534.1| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv] 527 CSGID 32-520 -13.400 6 IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
443-526 -24.600 22 IDP92663 hypothetical protein BB0811 [Bordetella bronchiseptica RB50] NP_887360 [Bordetella bronchiseptica RB50]

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15607143\|ref\|NP_214515.1\| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv]`	`507`	`CSGID`	`6-502`	`-117.000`	`47`	`IDP00004 Chromosomal replication initiator protein dnaA BA_0001 [Bacillus anthracis str. Ames]`
2	`gi\|15607144\|ref\|NP_214516.1\| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv]`	`402`	`CSGID`	`13-400`	`-97.100`	`29`	`IDP90614 DNA polymerase III subunit beta [Vibrio cholerae O1 biovar eltor str. N16961] VC0013 [Vibrio cholerae O1 biovar El Tor str. N16961]`
3	`gi\|15607145\|ref\|NP_214517.1\| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv]`	`385`	`CSGID`	`1-377`	`-101.000`	`25`	`IDP00109 gene: recF; Rec protein NT01SF4517 [Shigella flexneri 2a str. 2457T]`
4	`gi\|15607146\|ref\|NP_214518.1\| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv]`	`187`	`CSGID`	`52-165`	`-42.200`	`14`	`IDP90373 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_191 [Chlamydia trachomatis D/UW-3/CX]`
5	`gi\|15607147\|ref\|NP_214519.1\| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv]`	`714`	`CSGID`	`5-714`	`-82.600`	`34`	`IDP92137 DNA gyrase subunit B, putative [Toxoplasma gondii ME49] TGME49_097780 [Toxoplasma gondii ME49]`
				`37-714`	`-192.000`	`51`	`IDP02606 gene: gyrB; DNA gyrase subunit B [Listeria monocytogenes EGD-e] lmo0006 [Listeria monocytogenes EGD-e]`
6	`gi\|15607148\|ref\|NP_214520.1\| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv]`	`838`	`CSGID`	`9-838`	`-167.000`	`46`	`IDP90834 DNA gyrase, subunit A [Vibrio cholerae O1 biovar eltor str. N16961] VC1258 [Vibrio cholerae O1 biovar El Tor str. N16961]`
7	`gi\|15607149\|ref\|NP_214521.1\| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv]`	`304`	`CSGID`	`1-294`	`-11.300`	`10`	`IDP91949 pneumococcal histidine triad protein E [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007099 [Streptococcus pneumoniae str. Canada MDR_19A]`
8	`gi\|15607150\|ref\|NP_214522.1\| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv]`	`145`	`CSGID`	`7-133`	`-6.430`	`26`	`IDP90283 gene: GRA6; granule antigen protein GRA6 [Toxoplasma gondii] TGME49_075440 [Toxoplasma gondii]`
9	`gi\|15607151\|ref\|NP_214523.1\| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv]`	`182`	`CSGID`	`13-173`	`-84.000`	`41`	`IDP01228 peptidyl-prolyl cis-trans isomerase, cyclophilin-type BA_4283 [Bacillus anthracis str. Ames]`
10	`gi\|15607152\|ref\|NP_214524.1\| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv]`	`141`	`CSGID`	`18-141`	`-6.160`	`11`	`IDP95308 hypothetical protein VCA0021 [Vibrio cholerae O1 biovar El Tor str. N16961] NP_232422 [Vibrio cholerae O1 biovar El Tor str. N16961]`
11	`gi\|15607153\|ref\|NP_214525.1\| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv]`	`93`	`CSGID`	`3-59`	`-5.620`	`9`	`IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames]`
12	`gi\|15607154\|ref\|NP_214526.1\| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv]`	`262`	`CSGID`	`22-256`	`-70.300`	`15`	`IDP05645 hypothetical protein CD3297 [Clostridium difficile 630] CD3297 [Peptoclostridium difficile 630]`
13	`gi\|57116682\|ref\|YP_177615.1\| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv]`	`232`	`CSGID`	`1-232`	`-102.000`	`100`	`IDP06559 anthranilate synthase component II [Mycobacterium tuberculosis H37Rv] YP_177615 [Mycobacterium tuberculosis H37Rv]`
14	`gi\|15607156\|ref\|NP_214528.1\| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv]`	`626`	`CSGID`	`1-626`	`-138.000`	`27`	`IDP06302 serine/threonine protein kinase [Streptococcus pneumoniae TIGR4] NP_346168 [Streptococcus pneumoniae TIGR4]`
15	`gi\|15607157\|ref\|NP_214529.1\| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv]`	`431`	`CSGID`	`4-427`	`-101.000`	`28`	`IDP06302 serine/threonine protein kinase [Streptococcus pneumoniae TIGR4] NP_346168 [Streptococcus pneumoniae TIGR4]`
16	`gi\|15607158\|ref\|NP_214530.1\|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv]`	`461`	`CSGID`	`12-458`	`-101.000`	`23`	`IDP00345 hypothetical protein lmo0441 lmo0441 [Listeria monocytogenes EGD-e]`
17	`gi\|15607159\|ref\|NP_214531.1\|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv]`	`434`	`CSGID`	`12-414`	`-15.200`	`12`	`IDP91390 Lipid A core - O-antigen ligase [Vibrio vulnificus CMCP6] VV1_1426 [Vibrio vulnificus CMCP6]`
18	`gi\|15607160\|ref\|NP_214532.1\| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv]`	`514`	`CSGID`	`8-248`	`-82.000`	`34`	`IDP02614 hypothetical protein lmo1821 [Listeria monocytogenes EGD-e] lmo1821 [Listeria monocytogenes EGD-e]`
				`12-419`	`-25.800`	`14`	`IDP92014 protein phosphatase 2C, putative [Toxoplasma gondii ME49] TGME49_067100 [Toxoplasma gondii ME49]`
19	`gi\|15607161\|ref\|NP_214533.1\| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv]`	`155`	`CSGID`	`63-154`	`-31.000`	`17`	`IDP92663 hypothetical protein BB0811 [Bordetella bronchiseptica RB50] NP_887360 [Bordetella bronchiseptica RB50]`
20	`gi\|15607162\|ref\|NP_214534.1\| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv]`	`527`	`CSGID`	`32-520`	`-13.400`	`6`	`IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]`
				`443-526`	`-24.600`	`22`	`IDP92663 hypothetical protein BB0811 [Bordetella bronchiseptica RB50] NP_887360 [Bordetella bronchiseptica RB50]`