FFAS03 list of results M.tuberculosis / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4323 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15607143|ref|NP_214515.1| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv] 507 HGM_OVER 166-495 -3.390 10 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
2 gi|15607144|ref|NP_214516.1| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv] 402 HGM_OVER 19-359 -5.380 10 PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]
3 gi|15607145|ref|NP_214517.1| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv] 385 HGM_OVER 195-372 -2.940 11 PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;
4 gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv] 187 HGM_OVER 77-186 -4.780 14 PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]
5 gi|15607147|ref|NP_214519.1| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv] 714 HGM_OVER 33-607 -2.990 9 PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
6 gi|15607148|ref|NP_214520.1| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv] 838 HGM_OVER 1-178 -2.600 10 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;
7 gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv] 304 HGM_OVER 188-304 -5.160 16 PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
8 gi|15607150|ref|NP_214522.1| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv] 145 HGM_OVER 85-144 -5.470 26 PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;
9 gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv] 182 HGM_OVER 90-175 -3.110 20 PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
10 gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv] 141 HGM_OVER 69-141 -3.780 11 PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]
11 gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv] 93 HGM_OVER 37-75 -3.470 10 PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;
12 gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv] 262 HGM_OVER 26-165 -7.190 13 PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
13 gi|57116682|ref|YP_177615.1| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv] 232 HGM_OVER 36-220 -3.220 8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;
14 gi|15607156|ref|NP_214528.1| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv] 626 HGM_OVER 136-271 -3.750 9 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;
15 gi|15607157|ref|NP_214529.1| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv] 431 HGM_OVER 12-266 -3.950 9 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
16 gi|15607158|ref|NP_214530.1|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv] 461 HGM_OVER 43-193 -6.730 10 PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;
17 gi|15607159|ref|NP_214531.1|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv] 434 HGM_OVER 293-433 -4.290 7 PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
18 gi|15607160|ref|NP_214532.1| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv] 514 HGM_OVER 114-198 -3.830 20 PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;
19 gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv] 155 HGM_OVER 10-145 -5.290 10 HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;
20 gi|15607162|ref|NP_214534.1| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv] 527 HGM_OVER 2-144 -4.720 15 PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15607143\|ref\|NP_214515.1\| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv]`	`507`	`HGM_OVER`	`166-495`	`-3.390`	`10`	`PB005684 gi\|160884252\|ref\|ZP_02065255.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi\|156109991\|gb\|EDO11736.1\| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]`
2	`gi\|15607144\|ref\|NP_214516.1\| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv]`	`402`	`HGM_OVER`	`19-359`	`-5.380`	`10`	`PB004476 gi\|139436894\|ref\|ZP_01771054.1\| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi\|133776541\|gb\|EBA40361.1\| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]`
3	`gi\|15607145\|ref\|NP_214517.1\| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv]`	`385`	`HGM_OVER`	`195-372`	`-2.940`	`11`	`PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763;`
4	`gi\|15607146\|ref\|NP_214518.1\| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv]`	`187`	`HGM_OVER`	`77-186`	`-4.780`	`14`	`PB047496 gi\|150008556\|ref\|YP_001303299.1\| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi\|149936980\|gb\|ABR43677.1\| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]`
5	`gi\|15607147\|ref\|NP_214519.1\| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv]`	`714`	`HGM_OVER`	`33-607`	`-2.990`	`9`	`PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;`
6	`gi\|15607148\|ref\|NP_214520.1\| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv]`	`838`	`HGM_OVER`	`1-178`	`-2.600`	`10`	`HGC00164 gi\|163636082\|dbj\|BABG01000191.1\|4.0 TMP00833;`
7	`gi\|15607149\|ref\|NP_214521.1\| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv]`	`304`	`HGM_OVER`	`188-304`	`-5.160`	`16`	`PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;`
8	`gi\|15607150\|ref\|NP_214522.1\| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv]`	`145`	`HGM_OVER`	`85-144`	`-5.470`	`26`	`PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;`
9	`gi\|15607151\|ref\|NP_214523.1\| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv]`	`182`	`HGM_OVER`	`90-175`	`-3.110`	`20`	`PB031792 gi\|154174791\|ref\|YP_001409041.1\| flavodoxin family protein [Campylobacter curvus 525.92]gi\|112804021\|gb\|EAU01365.1\| flavodoxin family protein [Campylobacter curvus 525.92]`
10	`gi\|15607152\|ref\|NP_214524.1\| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv]`	`141`	`HGM_OVER`	`69-141`	`-3.780`	`11`	`PB002776 gi\|157737147\|ref\|YP_001489830.1\| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi\|157699001\|gb\|ABV67161.1\| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]`
11	`gi\|15607153\|ref\|NP_214525.1\| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv]`	`93`	`HGM_OVER`	`37-75`	`-3.470`	`10`	`PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;`
12	`gi\|15607154\|ref\|NP_214526.1\| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv]`	`262`	`HGM_OVER`	`26-165`	`-7.190`	`13`	`PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;`
13	`gi\|57116682\|ref\|YP_177615.1\| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv]`	`232`	`HGM_OVER`	`36-220`	`-3.220`	`8`	`HGC00267 gi\|163310129\|dbj\|BABD01000566.1\|6.0 TMP00066;`
14	`gi\|15607156\|ref\|NP_214528.1\| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv]`	`626`	`HGM_OVER`	`136-271`	`-3.750`	`9`	`HGC00024 gi\|162813637\|dbj\|BABA01031072.1\|2.0 TMP01508;`
15	`gi\|15607157\|ref\|NP_214529.1\| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv]`	`431`	`HGM_OVER`	`12-266`	`-3.950`	`9`	`PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;`
16	`gi\|15607158\|ref\|NP_214530.1\|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv]`	`461`	`HGM_OVER`	`43-193`	`-6.730`	`10`	`PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;`
17	`gi\|15607159\|ref\|NP_214531.1\|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv]`	`434`	`HGM_OVER`	`293-433`	`-4.290`	`7`	`PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]`
18	`gi\|15607160\|ref\|NP_214532.1\| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv]`	`514`	`HGM_OVER`	`114-198`	`-3.830`	`20`	`PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;`
19	`gi\|15607161\|ref\|NP_214533.1\| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv]`	`155`	`HGM_OVER`	`10-145`	`-5.290`	`10`	`HGC01213 gi\|163579070\|dbj\|BABE01006032.1\|2.0 TMP01709;`
20	`gi\|15607162\|ref\|NP_214534.1\| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv]`	`527`	`HGM_OVER`	`2-144`	`-4.720`	`15`	`PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;`