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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 41-60 of 4372< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
41 gi|15607183|ref|NP_214555.1| leucyl-tRNA synthetase (Rv0041) [Mycobacterium tuberculosis H37Rv] 969 PDB1018 12-969 -217.000 38  3zgz_A mol:protein length:880 LEUCINE--TRNA LIGASE
42 gi|15607184|ref|NP_214556.1| MarR family transcriptional regulator (Rv0042c) [Mycobacterium tuberculosis H37Rv] 208 PDB1018 34-194 -51.100 30  4yif_A mol:protein length:164 MarR family protein Rv0880
43 gi|15607185|ref|NP_214557.1| GntR family transcriptional regulator (Rv0043c) [Mycobacterium tuberculosis H37Rv] 244 PDB1018 2-216 -73.700 16  3c7j_A mol:protein length:237 Transcriptional regulator, GntR family
44 gi|15607186|ref|NP_214558.1| oxidoreductase (Rv0044c) [Mycobacterium tuberculosis H37Rv] 264 PDB1018 3-263 -77.700 18  2b81_A mol:protein length:323 Luciferase-like monooxygenase
45 gi|15607187|ref|NP_214559.1| hydrolase (Rv0045c) [Mycobacterium tuberculosis H37Rv] 298 PDB1018 1-298 -95.400 99  3p2m_A mol:protein length:330 POSSIBLE HYDROLASE
46 gi|15607188|ref|NP_214560.1| myo-inositol-1-phosphate synthase INO1 (inositol 1-phosphate synthetase) (D-glucose 6-phosphate cycloaldolase) (glucose 6-phosphate cyclase) (glucocycloaldolase) (Rv0046c) [Mycobacterium tuberculosis H37Rv] 367 PDB1018 1-367 -116.000 100  1gr0_A mol:protein length:367 INOSITOL-3-PHOSPHATE SYNTHASE
47 gi|15607189|ref|NP_214561.1| hypothetical protein (Rv0047c) [Mycobacterium tuberculosis H37Rv] 180 PDB1018 2-174 -69.300 23  1yg2_A mol:protein length:179 gene activator AphA
48 gi|15607190|ref|NP_214562.1| hypothetical protein (Rv0048c) [Mycobacterium tuberculosis H37Rv] 289 PDB1018 1-93 -9.800 14  3hug_B mol:protein length:108 PROBABLE CONSERVED MEMBRANE PROTEIN
49 gi|15607191|ref|NP_214563.1| hypothetical protein (Rv0049) [Mycobacterium tuberculosis H37Rv] 137 PDB1018 46-100 -8.200 18  1s24_A mol:protein length:87 Rubredoxin 2
50 gi|57116685|ref|YP_177687.1| bifunctional penicillin-binding protein 1A/1B (Rv0050) [Mycobacterium tuberculosis H37Rv] 678 PDB1018 18-670 -146.000 25  4oon_A mol:protein length:795 Penicillin-binding protein 1A
51 gi|15607193|ref|NP_214565.1| transmembrane protein (Rv0051) [Mycobacterium tuberculosis H37Rv] 560 PDB1018 1-523 -10.900 6aye_A mol:protein length:558 Mucolipin-3
27-486 -16.400 5ezm_A mol:protein length:578 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family
64-517 -11.800 3rce_A mol:protein length:724 Oligosaccharide transferase to N-glycosylate proteins
52 gi|15607194|ref|NP_214566.1| hypothetical protein (Rv0052) [Mycobacterium tuberculosis H37Rv] 187 PDB1018 1-187 -71.100 34  3non_A mol:protein length:231 Isocyanide hydratase
53 gi|15607195|ref|NP_214567.1| 30S ribosomal protein S6 (Rv0053) [Mycobacterium tuberculosis H37Rv] 96 PDB1018 1-96 -63.700 100  5v93_f mol:protein length:96 30S ribosomal protein S6
54 gi|15607196|ref|NP_214568.1| single-stranded DNA-binding protein (Rv0054) [Mycobacterium tuberculosis H37Rv] 164 PDB1018 1-164 -84.800 100  1ue1_A mol:protein length:164 Single-strand binding protein
55 gi|57116686|ref|YP_177688.1| 30S ribosomal protein S18 (Rv0055) [Mycobacterium tuberculosis H37Rv] 84 PDB1018 1-84 -52.800 100  5v93_r mol:protein length:84 30S ribosomal protein S18
56 gi|15607198|ref|NP_214570.1| 50S ribosomal protein L9 (Rv0056) [Mycobacterium tuberculosis H37Rv] 152 PDB1018 1-152 -84.100 100  5v7q_H mol:protein length:152 50S ribosomal protein L9
57 gi|15607199|ref|NP_214571.1|(removed signalp:1-21) hypothetical protein (Rv0057) [Mycobacterium tuberculosis H37Rv] 152 PDB1018 3-80 -8.350 13  4dhx_A mol:protein length:75 80 kDa MCM3-associated protein
58 gi|15607200|ref|NP_214572.1| replicative DNA helicase (Rv0058) [Mycobacterium tuberculosis H37Rv] 874 PDB1018 16-874 -94.600 45  2vye_A mol:protein length:454 REPLICATIVE DNA HELICASE
59 gi|15607201|ref|NP_214573.1| hypothetical protein (Rv0059) [Mycobacterium tuberculosis H37Rv] 230 PDB1018 8-208 -11.000 4f0d_A mol:protein length:277 Poly [ADP-ribose] polymerase 16
60 gi|15607202|ref|NP_214574.1| hypothetical protein (Rv0060) [Mycobacterium tuberculosis H37Rv] 352 PDB1018 1-155 -69.300 100  5m3i_A mol:protein length:165 RNase III inhibitor


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.