FFAS03 list of results M.tuberculosis / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4372 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15607143|ref|NP_214515.1| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv] 507 VFDB 8-503 -117.000 34 [L] COG0593 ATPase involved in DNA replication initiation
2 gi|15607144|ref|NP_214516.1| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv] 402 VFDB 13-402 -95.500 24 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
3 gi|15607145|ref|NP_214517.1| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv] 385 VFDB 1-377 -101.000 24 [L] COG1195 Recombinational DNA repair ATPase (RecF pathway)
4 gi|15607146|ref|NP_214518.1| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv] 187 VFDB 1-187 -80.100 70 [R] COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
5 gi|15607147|ref|NP_214519.1| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv] 714 VFDB 10-595 -10.600 11 [O] KOG0020 Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family
44-714 -154.000 49 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
6 gi|15607148|ref|NP_214520.1| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv] 838 VFDB 10-838 -159.000 40 [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
7 gi|15607149|ref|NP_214521.1| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv] 304 VFDB 1-304 -10.200 9 [K] KOG3915 Transcription regulator dachshund, contains SKI/SNO domain
2-198 -11.000 9 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
8 gi|15607150|ref|NP_214522.1| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv] 145 VFDB 1-128 -7.330 13 [R] COG5643 Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E
9 gi|15607151|ref|NP_214523.1| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv] 182 VFDB 2-181 -86.800 45 [O] KOG0881 Cyclophilin type peptidyl-prolyl cis-trans isomerase
10 gi|15607152|ref|NP_214524.1| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv] 141 VFDB 39-132 -9.160 11 [S] COG4687 Uncharacterized protein conserved in bacteria
11 gi|15607153|ref|NP_214525.1| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv] 93 VFDB 29-92 -8.430 18 [S] COG5528 Predicted integral membrane protein
12 gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv] 262 VFDB 18-250 -68.400 20 [S] COG3879 Uncharacterized protein conserved in bacteria
13 gi|57116682|ref|YP_177615.1| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv] 232 VFDB 2-232 -66.600 21 [F] KOG1622 GMP synthase
3-190 -85.300 50 [EH] COG0512 Anthranilate/para-aminobenzoate synthases component II
14 gi|15607156|ref|NP_214528.1| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv] 626 VFDB 1-331 -104.000 35 [RTKL] COG0515 Serine/threonine protein kinase
429-626 -52.900 84 [S] COG2815 Uncharacterized protein conserved in bacteria
15 gi|15607157|ref|NP_214529.1| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv] 431 VFDB 4-343 -102.000 29 [RTKL] COG0515 Serine/threonine protein kinase
10-431 -48.300 19 [T] KOG0576 Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family
16 gi|15607158|ref|NP_214530.1|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv] 461 VFDB 12-461 -94.700 24 [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2
17 gi|15607159|ref|NP_214531.1|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv] 434 VFDB 1-420 -12.000 13 [M] COG3307 Lipid A core - O-antigen ligase and related enzymes
35-415 -89.600 25 [D] COG0772 Bacterial cell division membrane protein
18 gi|15607160|ref|NP_214532.1| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv] 514 VFDB 1-248 -67.200 29 [T] COG0631 Serine/threonine protein phosphatase
8-287 -28.700 16 [T] KOG0698 Serine/threonine protein phosphatase
19 gi|15607161|ref|NP_214533.1| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv] 155 VFDB 42-155 -38.300 24 [T] COG1716 FOG: FHA domain
20 gi|15607162|ref|NP_214534.1| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv] 527 VFDB 1-526 -9.770 8 [U] KOG1091 Ypt/Rab-specific GTPase-activating protein GYP6
23-435 -15.600 6 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
278-518 -24.100 12 [T] KOG3872 FOG: FHA domain

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15607143\|ref\|NP_214515.1\| chromosomal replication initiation protein (Rv0001) [Mycobacterium tuberculosis H37Rv]`	`507`	`VFDB`	`8-503`	`-117.000`	`34`	`[L] COG0593 ATPase involved in DNA replication initiation`
2	`gi\|15607144\|ref\|NP_214516.1\| DNA polymerase III subunit beta (Rv0002) [Mycobacterium tuberculosis H37Rv]`	`402`	`VFDB`	`13-402`	`-95.500`	`24`	`[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)`
3	`gi\|15607145\|ref\|NP_214517.1\| recombination protein F (Rv0003) [Mycobacterium tuberculosis H37Rv]`	`385`	`VFDB`	`1-377`	`-101.000`	`24`	`[L] COG1195 Recombinational DNA repair ATPase (RecF pathway)`
4	`gi\|15607146\|ref\|NP_214518.1\| hypothetical protein (Rv0004) [Mycobacterium tuberculosis H37Rv]`	`187`	`VFDB`	`1-187`	`-80.100`	`70`	`[R] COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives`
5	`gi\|15607147\|ref\|NP_214519.1\| DNA gyrase subunit B (Rv0005) [Mycobacterium tuberculosis H37Rv]`	`714`	`VFDB`	`10-595`	`-10.600`	`11`	`[O] KOG0020 Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family`
				`44-714`	`-154.000`	`49`	`[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit`
6	`gi\|15607148\|ref\|NP_214520.1\| DNA gyrase subunit A (Rv0006) [Mycobacterium tuberculosis H37Rv]`	`838`	`VFDB`	`10-838`	`-159.000`	`40`	`[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit`
7	`gi\|15607149\|ref\|NP_214521.1\| hypothetical protein (Rv0007) [Mycobacterium tuberculosis H37Rv]`	`304`	`VFDB`	`1-304`	`-10.200`	`9`	`[K] KOG3915 Transcription regulator dachshund, contains SKI/SNO domain`
				`2-198`	`-11.000`	`9`	`[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)`
8	`gi\|15607150\|ref\|NP_214522.1\| hypothetical protein (Rv0008c) [Mycobacterium tuberculosis H37Rv]`	`145`	`VFDB`	`1-128`	`-7.330`	`13`	`[R] COG5643 Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E`
9	`gi\|15607151\|ref\|NP_214523.1\| iron-regulated peptidyl-prolyl cis-trans isomerase A (Rv0009) [Mycobacterium tuberculosis H37Rv]`	`182`	`VFDB`	`2-181`	`-86.800`	`45`	`[O] KOG0881 Cyclophilin type peptidyl-prolyl cis-trans isomerase`
10	`gi\|15607152\|ref\|NP_214524.1\| hypothetical protein (Rv0010c) [Mycobacterium tuberculosis H37Rv]`	`141`	`VFDB`	`39-132`	`-9.160`	`11`	`[S] COG4687 Uncharacterized protein conserved in bacteria`
11	`gi\|15607153\|ref\|NP_214525.1\| putative septation inhibitor protein (Rv0011c) [Mycobacterium tuberculosis H37Rv]`	`93`	`VFDB`	`29-92`	`-8.430`	`18`	`[S] COG5528 Predicted integral membrane protein`
12	`gi\|15607154\|ref\|NP_214526.1\| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv]`	`262`	`VFDB`	`18-250`	`-68.400`	`20`	`[S] COG3879 Uncharacterized protein conserved in bacteria`
13	`gi\|57116682\|ref\|YP_177615.1\| para-aminobenzoate synthase component II (Rv0013) [Mycobacterium tuberculosis H37Rv]`	`232`	`VFDB`	`2-232`	`-66.600`	`21`	`[F] KOG1622 GMP synthase`
				`3-190`	`-85.300`	`50`	`[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II`
14	`gi\|15607156\|ref\|NP_214528.1\| transmembrane serine/threonine-protein kinase B PKNB (protein kinase B) (STPK B) (Rv0014c) [Mycobacterium tuberculosis H37Rv]`	`626`	`VFDB`	`1-331`	`-104.000`	`35`	`[RTKL] COG0515 Serine/threonine protein kinase`
				`429-626`	`-52.900`	`84`	`[S] COG2815 Uncharacterized protein conserved in bacteria`
15	`gi\|15607157\|ref\|NP_214529.1\| transmembrane serine/threonine-protein kinase A PKNA (protein kinase A) (STPK A) (Rv0015c) [Mycobacterium tuberculosis H37Rv]`	`431`	`VFDB`	`4-343`	`-102.000`	`29`	`[RTKL] COG0515 Serine/threonine protein kinase`
				`10-431`	`-48.300`	`19`	`[T] KOG0576 Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family`
16	`gi\|15607158\|ref\|NP_214530.1\|(removed signalp:1-30) penicillin-binding protein PbpA (Rv0016c) [Mycobacterium tuberculosis H37Rv]`	`461`	`VFDB`	`12-461`	`-94.700`	`24`	`[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2`
17	`gi\|15607159\|ref\|NP_214531.1\|(removed signalp:1-35) cell division protein RodA (Rv0017c) [Mycobacterium tuberculosis H37Rv]`	`434`	`VFDB`	`1-420`	`-12.000`	`13`	`[M] COG3307 Lipid A core - O-antigen ligase and related enzymes`
				`35-415`	`-89.600`	`25`	`[D] COG0772 Bacterial cell division membrane protein`
18	`gi\|15607160\|ref\|NP_214532.1\| serine/threonine phosphatase (Rv0018c) [Mycobacterium tuberculosis H37Rv]`	`514`	`VFDB`	`1-248`	`-67.200`	`29`	`[T] COG0631 Serine/threonine protein phosphatase`
				`8-287`	`-28.700`	`16`	`[T] KOG0698 Serine/threonine protein phosphatase`
19	`gi\|15607161\|ref\|NP_214533.1\| hypothetical protein (Rv0019c) [Mycobacterium tuberculosis H37Rv]`	`155`	`VFDB`	`42-155`	`-38.300`	`24`	`[T] COG1716 FOG: FHA domain`
20	`gi\|15607162\|ref\|NP_214534.1\| hypothetical protein (Rv0020c) [Mycobacterium tuberculosis H37Rv]`	`527`	`VFDB`	`1-526`	`-9.770`	`8`	`[U] KOG1091 Ypt/Rab-specific GTPase-activating protein GYP6`
				`23-435`	`-15.600`	`6`	`[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)`
				`278-518`	`-24.100`	`12`	`[T] KOG3872 FOG: FHA domain`