FFAS03 list of results S.aureus / COG1018

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 2876 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15922991|ref|NP_370525.1| chromosomal replication initiation protein (SAV0001) [Staphylococcus aureus subsp. aureus Mu50] 453 COG1018 1-452 -122.000 37 [L] COG0593 ATPase involved in DNA replication initiation
2 gi|15922992|ref|NP_370526.1| DNA polymerase III subunit beta (SAV0002) [Staphylococcus aureus subsp. aureus Mu50] 377 COG1018 2-376 -98.300 26 [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
3 gi|15922993|ref|NP_370527.1| hypothetical protein (SAV0003) [Staphylococcus aureus subsp. aureus Mu50] 81 COG1018 4-70 -33.300 40 [S] COG2501 Uncharacterized conserved protein
4 gi|15922994|ref|NP_370528.1| recombination protein F (SAV0004) [Staphylococcus aureus subsp. aureus Mu50] 370 COG1018 1-370 -104.000 23 [L] COG1195 Recombinational DNA repair ATPase (RecF pathway)
5 gi|15922995|ref|NP_370529.1| DNA gyrase subunit B (SAV0005) [Staphylococcus aureus subsp. aureus Mu50] 644 COG1018 7-644 -151.000 56 [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
6 gi|15922996|ref|NP_370530.1| DNA gyrase subunit A (SAV0006) [Staphylococcus aureus subsp. aureus Mu50] 889 COG1018 3-840 -158.000 42 [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
7 gi|15922997|ref|NP_370531.1| hypothetical protein (SAV0007) [Staphylococcus aureus subsp. aureus Mu50] 276 COG1018 2-276 -78.200 26 [G] COG0063 Predicted sugar kinase
8 gi|161375866|ref|NP_370532.2| histidine ammonia-lyase (SAV0008) [Staphylococcus aureus subsp. aureus Mu50] 504 COG1018 2-503 -137.000 38 [E] COG2986 Histidine ammonia-lyase
9 gi|15922999|ref|NP_370533.1| seryl-tRNA synthetase (SAV0009) [Staphylococcus aureus subsp. aureus Mu50] 428 COG1018 1-424 -130.000 55 [J] COG0172 Seryl-tRNA synthetase
10 gi|15923000|ref|NP_370534.1| hypothetical protein (SAV0010) [Staphylococcus aureus subsp. aureus Mu50] 231 COG1018 2-231 -84.700 22 [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)
11 gi|15923001|ref|NP_370535.1|(removed signalp:1-29) hypothetical protein (SAV0011) [Staphylococcus aureus subsp. aureus Mu50] 80 COG1018 1-80 -38.600 16 [S] COG4392 Predicted membrane protein
12 gi|15923002|ref|NP_370536.1| putative homoserine-o-acetyltransferase (SAV0012) [Staphylococcus aureus subsp. aureus Mu50] 329 COG1018 4-325 -102.000 26 [E] COG2021 Homoserine acetyltransferase
13 gi|15923003|ref|NP_370537.1| hypothetical protein (SAV0013) [Staphylococcus aureus subsp. aureus Mu50] 331 COG1018 27-330 -57.500 20 [S] COG4241 Predicted membrane protein
14 gi|15923004|ref|NP_370538.1|(removed signalp:1-32) hypothetical protein (SAV0014) [Staphylococcus aureus subsp. aureus Mu50] 623 COG1018 2-622 -126.000 50 [T] COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
15 gi|15923005|ref|NP_370539.1| 50S ribosomal protein L9 (SAV0015) [Staphylococcus aureus subsp. aureus Mu50] 148 COG1018 1-147 -70.200 32 [J] COG0359 Ribosomal protein L9
16 gi|15923006|ref|NP_370540.1| replicative DNA helicase (SAV0016) [Staphylococcus aureus subsp. aureus Mu50] 466 COG1018 2-465 -122.000 41 [L] COG0305 Replicative DNA helicase
17 gi|15923007|ref|NP_370541.1| adenylosuccinate synthetase (SAV0017) [Staphylococcus aureus subsp. aureus Mu50] 427 COG1018 1-427 -136.000 65 [F] COG0104 Adenylosuccinate synthase
18 gi|15923008|ref|NP_370542.1| response regulator (SAV0018) [Staphylococcus aureus subsp. aureus Mu50] 235 COG1018 3-234 -99.600 36 [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
19 gi|15923009|ref|NP_370543.1| two-component sensor histidine kinase (SAV0019) [Staphylococcus aureus subsp. aureus Mu50] 608 COG1018 1-608 -140.000 45 [T] COG5002 Signal transduction histidine kinase
20 gi|15923010|ref|NP_370544.1| hypothetical protein (SAV0020) [Staphylococcus aureus subsp. aureus Mu50] 453 COG1018 11-453 -99.300 16 [S] COG4863 Uncharacterized protein conserved in bacteria

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster

#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|15922991\|ref\|NP_370525.1\| chromosomal replication initiation protein (SAV0001) [Staphylococcus aureus subsp. aureus Mu50]`	`453`	`COG1018`	`1-452`	`-122.000`	`37`	`[L] COG0593 ATPase involved in DNA replication initiation`
2	`gi\|15922992\|ref\|NP_370526.1\| DNA polymerase III subunit beta (SAV0002) [Staphylococcus aureus subsp. aureus Mu50]`	`377`	`COG1018`	`2-376`	`-98.300`	`26`	`[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)`
3	`gi\|15922993\|ref\|NP_370527.1\| hypothetical protein (SAV0003) [Staphylococcus aureus subsp. aureus Mu50]`	`81`	`COG1018`	`4-70`	`-33.300`	`40`	`[S] COG2501 Uncharacterized conserved protein`
4	`gi\|15922994\|ref\|NP_370528.1\| recombination protein F (SAV0004) [Staphylococcus aureus subsp. aureus Mu50]`	`370`	`COG1018`	`1-370`	`-104.000`	`23`	`[L] COG1195 Recombinational DNA repair ATPase (RecF pathway)`
5	`gi\|15922995\|ref\|NP_370529.1\| DNA gyrase subunit B (SAV0005) [Staphylococcus aureus subsp. aureus Mu50]`	`644`	`COG1018`	`7-644`	`-151.000`	`56`	`[L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit`
6	`gi\|15922996\|ref\|NP_370530.1\| DNA gyrase subunit A (SAV0006) [Staphylococcus aureus subsp. aureus Mu50]`	`889`	`COG1018`	`3-840`	`-158.000`	`42`	`[L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit`
7	`gi\|15922997\|ref\|NP_370531.1\| hypothetical protein (SAV0007) [Staphylococcus aureus subsp. aureus Mu50]`	`276`	`COG1018`	`2-276`	`-78.200`	`26`	`[G] COG0063 Predicted sugar kinase`
8	`gi\|161375866\|ref\|NP_370532.2\| histidine ammonia-lyase (SAV0008) [Staphylococcus aureus subsp. aureus Mu50]`	`504`	`COG1018`	`2-503`	`-137.000`	`38`	`[E] COG2986 Histidine ammonia-lyase`
9	`gi\|15922999\|ref\|NP_370533.1\| seryl-tRNA synthetase (SAV0009) [Staphylococcus aureus subsp. aureus Mu50]`	`428`	`COG1018`	`1-424`	`-130.000`	`55`	`[J] COG0172 Seryl-tRNA synthetase`
10	`gi\|15923000\|ref\|NP_370534.1\| hypothetical protein (SAV0010) [Staphylococcus aureus subsp. aureus Mu50]`	`231`	`COG1018`	`2-231`	`-84.700`	`22`	`[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)`
11	`gi\|15923001\|ref\|NP_370535.1\|(removed signalp:1-29) hypothetical protein (SAV0011) [Staphylococcus aureus subsp. aureus Mu50]`	`80`	`COG1018`	`1-80`	`-38.600`	`16`	`[S] COG4392 Predicted membrane protein`
12	`gi\|15923002\|ref\|NP_370536.1\| putative homoserine-o-acetyltransferase (SAV0012) [Staphylococcus aureus subsp. aureus Mu50]`	`329`	`COG1018`	`4-325`	`-102.000`	`26`	`[E] COG2021 Homoserine acetyltransferase`
13	`gi\|15923003\|ref\|NP_370537.1\| hypothetical protein (SAV0013) [Staphylococcus aureus subsp. aureus Mu50]`	`331`	`COG1018`	`27-330`	`-57.500`	`20`	`[S] COG4241 Predicted membrane protein`
14	`gi\|15923004\|ref\|NP_370538.1\|(removed signalp:1-32) hypothetical protein (SAV0014) [Staphylococcus aureus subsp. aureus Mu50]`	`623`	`COG1018`	`2-622`	`-126.000`	`50`	`[T] COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain`
15	`gi\|15923005\|ref\|NP_370539.1\| 50S ribosomal protein L9 (SAV0015) [Staphylococcus aureus subsp. aureus Mu50]`	`148`	`COG1018`	`1-147`	`-70.200`	`32`	`[J] COG0359 Ribosomal protein L9`
16	`gi\|15923006\|ref\|NP_370540.1\| replicative DNA helicase (SAV0016) [Staphylococcus aureus subsp. aureus Mu50]`	`466`	`COG1018`	`2-465`	`-122.000`	`41`	`[L] COG0305 Replicative DNA helicase`
17	`gi\|15923007\|ref\|NP_370541.1\| adenylosuccinate synthetase (SAV0017) [Staphylococcus aureus subsp. aureus Mu50]`	`427`	`COG1018`	`1-427`	`-136.000`	`65`	`[F] COG0104 Adenylosuccinate synthase`
18	`gi\|15923008\|ref\|NP_370542.1\| response regulator (SAV0018) [Staphylococcus aureus subsp. aureus Mu50]`	`235`	`COG1018`	`3-234`	`-99.600`	`36`	`[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain`
19	`gi\|15923009\|ref\|NP_370543.1\| two-component sensor histidine kinase (SAV0019) [Staphylococcus aureus subsp. aureus Mu50]`	`608`	`COG1018`	`1-608`	`-140.000`	`45`	`[T] COG5002 Signal transduction histidine kinase`
20	`gi\|15923010\|ref\|NP_370544.1\| hypothetical protein (SAV0020) [Staphylococcus aureus subsp. aureus Mu50]`	`453`	`COG1018`	`11-453`	`-99.300`	`16`	`[S] COG4863 Uncharacterized protein conserved in bacteria`