FFAS03 list of results S.typhi / CSGID

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4946 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|16759014|ref|NP_454631.1| hypothetical protein (STY0021) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 234 CSGID 1-151 -12.600 7 IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]
34-229 -48.800 16 IDP91810 gene: crp; DNA-binding transcriptional dual regulator [Escherichia coli str. K-12 substr. MG1655] b3357 [Escherichia coli str. K-12 substr. MG1655]
22 gi|16759015|ref|NP_454632.1|(removed signalp:1-24) fimbrial subunit (STY0024) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 156 CSGID 2-156 -57.100 23 IDP95105 fimbriae stability-associated protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002921124 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
23 gi|16759016|ref|NP_454633.1|(removed signalp:1-26) fimbrial chaperone (STY0025) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 202 CSGID 1-201 -91.200 41 IDP93873 putative fimbrial chaperone protein [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA26882 [Yersinia enterocolitica subsp. enterocolitica WA-314]
24 gi|16759017|ref|NP_454634.1|(removed signalp:1-21) fimbrial subunit (STY0029) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 314 CSGID 2-314 -55.800 12 IDP95141 fimbrial adhesin protein precursor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002921125 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
25 gi|16759018|ref|NP_454635.1|(removed signalp:1-23) fimbrial subunit (STY0030) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 158 CSGID 2-158 -59.100 20 IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]
26 gi|16759019|ref|NP_454636.1|(removed signalp:1-20) fimbrial subunit (STY0031) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 152 CSGID 2-152 -59.000 23 IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]
27 gi|16759020|ref|NP_454637.1|(removed signalp:1-22) fimbrial chaperone (STY0032) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 212 CSGID 1-208 -92.000 37 IDP93873 putative fimbrial chaperone protein [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA26882 [Yersinia enterocolitica subsp. enterocolitica WA-314]
28 gi|16759021|ref|NP_454638.1|(removed signalp:1-27) hypothetical protein (STY0033) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 254 CSGID 1-254 -87.100 29 IDP91528 gene: com1; 27 kDa outer membrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] lpg1841 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
29 gi|16759022|ref|NP_454639.1| hypothetical protein (STY0034) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 95 CSGID 1-95 -22.400 13 IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]
30 gi|16759023|ref|NP_454640.1| hypothetical protein (STY0035) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 149 CSGID 1-144 -57.500 39 IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
31 gi|16759024|ref|NP_454641.1| LysR family transcriptional regulator (STY0036) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 331 CSGID 10-330 -43.600 15 IDP00586 gene: metR; lysR-family transcriptional regulatory protein YPO3789 [Yersinia pestis CO92]
32 gi|16759025|ref|NP_454642.1| putative transcriptional regulator (STY0038) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 101 CSGID 1-101 -46.700 45 IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
33 gi|16759026|ref|NP_454643.1| sulfatase (STY0039) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 572 CSGID 1-170 -27.600 12 IDP05757 hypothetical protein lmo0881 [Listeria monocytogenes EGD-e] lmo0881 [Listeria monocytogenes EGD-e]
64-502 -9.550 9 IDP01398 outer membrane protein assembly complex subunit YfgL VC0762 [Vibrio cholerae O1 biovar El Tor str. N16961]
34 gi|16759027|ref|NP_454644.1|(removed signalp:1-29) putative secreted 5'-nucleotidase (STY0040) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 494 CSGID 2-493 -113.000 24 IDP05043 putative 5`-nucleotidase [Bacillus anthracis str. Ames] BA_3162 [Bacillus anthracis str. Ames]
35 gi|16759028|ref|NP_454645.1|(removed signalp:1-24) hypothetical protein (STY0041) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 229 CSGID 1-229 -56.300 10 IDP01451 outer membrane protein OmpK VC2305 [Vibrio cholerae O1 biovar El Tor str. N16961]
36 gi|16759029|ref|NP_454646.1|(removed signalp:1-25) putative secreted sulfatase (STY0042) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 472 CSGID 1-468 -122.000 21 IDP02230 putative sulfatase [Yersinia pestis CO92] YPO0829 [Yersinia pestis CO92]
37 gi|16759030|ref|NP_454647.1| sulfatase regulatory protein (STY0043) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 396 CSGID 2-390 -111.000 44 IDP91336 arylsulfatase regulator [Vibrio vulnificus CMCP6] VV2_0152 [Vibrio vulnificus CMCP6]
38 gi|16759031|ref|NP_454648.1| hypothetical protein (STY0045) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 327 CSGID 18-232 -6.960 10 IDP95184 gene: lmo0178; lmo0178 [Listeria monocytogenes EGD-e] CAC98393 [Listeria monocytogenes EGD-e]
39 gi|16759032|ref|NP_454649.1| sulfatase (STY0046) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 571 CSGID 18-170 -28.900 10 IDP05757 hypothetical protein lmo0881 [Listeria monocytogenes EGD-e] lmo0881 [Listeria monocytogenes EGD-e]
60-506 -9.610 10 IDP01398 outer membrane protein assembly complex subunit YfgL VC0762 [Vibrio cholerae O1 biovar El Tor str. N16961]
40 gi|16759033|ref|NP_454650.1| pH-dependent sodium/proton antiporter (STY0047) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 388 CSGID 16-382 -7.260 12 IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`gi\|16759014\|ref\|NP_454631.1\| hypothetical protein (STY0021) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`234`	`CSGID`	`1-151`	`-12.600`	`7`	`IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]`
				`34-229`	`-48.800`	`16`	`IDP91810 gene: crp; DNA-binding transcriptional dual regulator [Escherichia coli str. K-12 substr. MG1655] b3357 [Escherichia coli str. K-12 substr. MG1655]`
22	`gi\|16759015\|ref\|NP_454632.1\|(removed signalp:1-24) fimbrial subunit (STY0024) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`156`	`CSGID`	`2-156`	`-57.100`	`23`	`IDP95105 fimbriae stability-associated protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002921124 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]`
23	`gi\|16759016\|ref\|NP_454633.1\|(removed signalp:1-26) fimbrial chaperone (STY0025) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`202`	`CSGID`	`1-201`	`-91.200`	`41`	`IDP93873 putative fimbrial chaperone protein [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA26882 [Yersinia enterocolitica subsp. enterocolitica WA-314]`
24	`gi\|16759017\|ref\|NP_454634.1\|(removed signalp:1-21) fimbrial subunit (STY0029) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`314`	`CSGID`	`2-314`	`-55.800`	`12`	`IDP95141 fimbrial adhesin protein precursor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002921125 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]`
25	`gi\|16759018\|ref\|NP_454635.1\|(removed signalp:1-23) fimbrial subunit (STY0030) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`158`	`CSGID`	`2-158`	`-59.100`	`20`	`IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]`
26	`gi\|16759019\|ref\|NP_454636.1\|(removed signalp:1-20) fimbrial subunit (STY0031) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`152`	`CSGID`	`2-152`	`-59.000`	`23`	`IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]`
27	`gi\|16759020\|ref\|NP_454637.1\|(removed signalp:1-22) fimbrial chaperone (STY0032) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`212`	`CSGID`	`1-208`	`-92.000`	`37`	`IDP93873 putative fimbrial chaperone protein [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA26882 [Yersinia enterocolitica subsp. enterocolitica WA-314]`
28	`gi\|16759021\|ref\|NP_454638.1\|(removed signalp:1-27) hypothetical protein (STY0033) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`254`	`CSGID`	`1-254`	`-87.100`	`29`	`IDP91528 gene: com1; 27 kDa outer membrane protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] lpg1841 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]`
29	`gi\|16759022\|ref\|NP_454639.1\| hypothetical protein (STY0034) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`95`	`CSGID`	`1-95`	`-22.400`	`13`	`IDP93898 fimbrial protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005443 [Yersinia enterocolitica subsp. enterocolitica 8081]`
30	`gi\|16759023\|ref\|NP_454640.1\| hypothetical protein (STY0035) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`149`	`CSGID`	`1-144`	`-57.500`	`39`	`IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
31	`gi\|16759024\|ref\|NP_454641.1\| LysR family transcriptional regulator (STY0036) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`331`	`CSGID`	`10-330`	`-43.600`	`15`	`IDP00586 gene: metR; lysR-family transcriptional regulatory protein YPO3789 [Yersinia pestis CO92]`
32	`gi\|16759025\|ref\|NP_454642.1\| putative transcriptional regulator (STY0038) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`101`	`CSGID`	`1-101`	`-46.700`	`45`	`IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
33	`gi\|16759026\|ref\|NP_454643.1\| sulfatase (STY0039) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`572`	`CSGID`	`1-170`	`-27.600`	`12`	`IDP05757 hypothetical protein lmo0881 [Listeria monocytogenes EGD-e] lmo0881 [Listeria monocytogenes EGD-e]`
				`64-502`	`-9.550`	`9`	`IDP01398 outer membrane protein assembly complex subunit YfgL VC0762 [Vibrio cholerae O1 biovar El Tor str. N16961]`
34	`gi\|16759027\|ref\|NP_454644.1\|(removed signalp:1-29) putative secreted 5'-nucleotidase (STY0040) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`494`	`CSGID`	`2-493`	`-113.000`	`24`	IDP05043 putative 5`-nucleotidase [Bacillus anthracis str. Ames] BA_3162 [Bacillus anthracis str. Ames]
35	`gi\|16759028\|ref\|NP_454645.1\|(removed signalp:1-24) hypothetical protein (STY0041) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`229`	`CSGID`	`1-229`	`-56.300`	`10`	`IDP01451 outer membrane protein OmpK VC2305 [Vibrio cholerae O1 biovar El Tor str. N16961]`
36	`gi\|16759029\|ref\|NP_454646.1\|(removed signalp:1-25) putative secreted sulfatase (STY0042) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`472`	`CSGID`	`1-468`	`-122.000`	`21`	`IDP02230 putative sulfatase [Yersinia pestis CO92] YPO0829 [Yersinia pestis CO92]`
37	`gi\|16759030\|ref\|NP_454647.1\| sulfatase regulatory protein (STY0043) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`396`	`CSGID`	`2-390`	`-111.000`	`44`	`IDP91336 arylsulfatase regulator [Vibrio vulnificus CMCP6] VV2_0152 [Vibrio vulnificus CMCP6]`
38	`gi\|16759031\|ref\|NP_454648.1\| hypothetical protein (STY0045) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`327`	`CSGID`	`18-232`	`-6.960`	`10`	`IDP95184 gene: lmo0178; lmo0178 [Listeria monocytogenes EGD-e] CAC98393 [Listeria monocytogenes EGD-e]`
39	`gi\|16759032\|ref\|NP_454649.1\| sulfatase (STY0046) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`571`	`CSGID`	`18-170`	`-28.900`	`10`	`IDP05757 hypothetical protein lmo0881 [Listeria monocytogenes EGD-e] lmo0881 [Listeria monocytogenes EGD-e]`
				`60-506`	`-9.610`	`10`	`IDP01398 outer membrane protein assembly complex subunit YfgL VC0762 [Vibrio cholerae O1 biovar El Tor str. N16961]`
40	`gi\|16759033\|ref\|NP_454650.1\| pH-dependent sodium/proton antiporter (STY0047) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`388`	`CSGID`	`16-382`	`-7.260`	`12`	`IDP91361 NhaP-type Na+/H+ and K+/H+ antiporters [Vibrio vulnificus CMCP6] VV1_2840 [Vibrio vulnificus CMCP6]`