FFAS03 list of results S.typhi / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4945 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16758994|ref|NP_454611.1| thr operon leader peptide (STY0001) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 21 HGM_OVER 1-20 -0.897 15 PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)
2 gi|16758995|ref|NP_454612.1| bifunctional aspartokinase I/homeserine dehydrogenase I (STY0002) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 820 HGM_OVER 187-444 -2.260 10 PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]
3 gi|16758996|ref|NP_454613.1| homoserine kinase (STY0003) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 309 HGM_OVER 89-245 -3.410 7 PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;
4 gi|16758997|ref|NP_454614.1| threonine synthase (STY0004) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 428 HGM_OVER 105-193 -2.170 18 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;
5 gi|16758998|ref|NP_454615.1| hypothetical protein (STY0005) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 257 HGM_OVER 36-256 -3.900 11 PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
6 gi|16758999|ref|NP_454616.1| putative amino-acid transport protein (STY0006) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 476 HGM_OVER 260-440 -3.670 11 HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;
7 gi|16759000|ref|NP_454617.1| transaldolase B (STY0007) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 317 HGM_OVER 1-162 -3.230 11 PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
8 gi|16759001|ref|NP_454618.1| molybdenum cofactor biosynthesis protein MogA (STY0008) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 196 HGM_OVER 46-135 -3.870 11 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;
9 gi|16759002|ref|NP_454619.1| hypothetical protein (STY0009) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 188 HGM_OVER 12-59 -5.020 17 PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
10 gi|16759003|ref|NP_454620.1| hypothetical protein (STY0010) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 237 HGM_OVER 1-141 -5.560 9 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
11 gi|16759004|ref|NP_454621.1|(removed signalp:1-23) hypothetical protein (STY0011) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 111 HGM_OVER 4-111 -5.590 11 HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;
12 gi|16759005|ref|NP_454622.1| molecular chaperone DnaK (STY0012) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 638 HGM_OVER 115-495 -7.910 12 PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
13 gi|16759006|ref|NP_454623.1| chaperone protein DnaJ (STY0013) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 379 HGM_OVER 147-225 -5.010 15 HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
14 gi|16759007|ref|NP_454624.1| putative regulatory protein (STY0014) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 315 HGM_OVER 16-107 -4.070 15 PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]
15 gi|16759008|ref|NP_454625.1| hypothetical protein (STY0015) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 114 HGM_OVER 29-88 -5.090 10 PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;
16 gi|16759009|ref|NP_454626.1| hypothetical protein (STY0016) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 177 HGM_OVER 77-173 -5.750 17 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;
17 gi|16759010|ref|NP_454627.1| hypothetical protein (STY0017) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 147 HGM_OVER 1-107 -4.880 11 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
18 gi|16759011|ref|NP_454628.1| putative chitinase (STY0018) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 699 HGM_OVER 176-304 -4.670 17 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
19 gi|16759012|ref|NP_454629.1| hypothetical protein (STY0019) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 383 HGM_OVER 9-149 -4.410 8 PB009233 Q7MX23_PORGI/1-175 PB009233; Pfam-B_9233;
20 gi|16759013|ref|NP_454630.1| hypothetical protein (STY0020) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 620 HGM_OVER 355-521 -3.370 9 PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|16758994\|ref\|NP_454611.1\| thr operon leader peptide (STY0001) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`21`	`HGM_OVER`	`1-20`	`-0.897`	`15`	`PB045072 _Gut.Meta.Jp.0111663_ gi\|163310555\|dbj\|BABD01000145.1\|\|3 (+ 1662:2028~0 complete)`
2	`gi\|16758995\|ref\|NP_454612.1\| bifunctional aspartokinase I/homeserine dehydrogenase I (STY0002) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`820`	`HGM_OVER`	`187-444`	`-2.260`	`10`	`PB083081 gi\|160890648\|ref\|ZP_02071651.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi\|156859647\|gb\|EDO53078.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]`
3	`gi\|16758996\|ref\|NP_454613.1\| homoserine kinase (STY0003) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`309`	`HGM_OVER`	`89-245`	`-3.410`	`7`	`PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;`
4	`gi\|16758997\|ref\|NP_454614.1\| threonine synthase (STY0004) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`428`	`HGM_OVER`	`105-193`	`-2.170`	`18`	`HGC00552 gi\|162599220\|dbj\|BAAV01006262.1\|2.0 TMP00636;`
5	`gi\|16758998\|ref\|NP_454615.1\| hypothetical protein (STY0005) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`257`	`HGM_OVER`	`36-256`	`-3.900`	`11`	`PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;`
6	`gi\|16758999\|ref\|NP_454616.1\| putative amino-acid transport protein (STY0006) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`476`	`HGM_OVER`	`260-440`	`-3.670`	`11`	`HGC00762 gi\|162641591\|dbj\|BAAX01018014.1\|1.0 TMP00997;`
7	`gi\|16759000\|ref\|NP_454617.1\| transaldolase B (STY0007) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`317`	`HGM_OVER`	`1-162`	`-3.230`	`11`	`PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;`
8	`gi\|16759001\|ref\|NP_454618.1\| molybdenum cofactor biosynthesis protein MogA (STY0008) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`196`	`HGM_OVER`	`46-135`	`-3.870`	`11`	`HGC00164 gi\|163636082\|dbj\|BABG01000191.1\|4.0 TMP00833;`
9	`gi\|16759002\|ref\|NP_454619.1\| hypothetical protein (STY0009) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`188`	`HGM_OVER`	`12-59`	`-5.020`	`17`	`PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;`
10	`gi\|16759003\|ref\|NP_454620.1\| hypothetical protein (STY0010) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`237`	`HGM_OVER`	`1-141`	`-5.560`	`9`	`PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;`
11	`gi\|16759004\|ref\|NP_454621.1\|(removed signalp:1-23) hypothetical protein (STY0011) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`111`	`HGM_OVER`	`4-111`	`-5.590`	`11`	`HGC00947 gi\|162844524\|dbj\|BABA01000185.1\|4.0 TMP01280;`
12	`gi\|16759005\|ref\|NP_454622.1\| molecular chaperone DnaK (STY0012) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`638`	`HGM_OVER`	`115-495`	`-7.910`	`12`	`PB162065 _Gut.Meta.Jp.0089312_ gi\|162832207\|dbj\|BABA01012502.1\|\|1 (- 0:1326~0 complete)`
13	`gi\|16759006\|ref\|NP_454623.1\| chaperone protein DnaJ (STY0013) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`379`	`HGM_OVER`	`147-225`	`-5.010`	`15`	`HGC00991 gi\|163600283\|dbj\|BABF01000984.1\|3.0 TMP01348;`
14	`gi\|16759007\|ref\|NP_454624.1\| putative regulatory protein (STY0014) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`315`	`HGM_OVER`	`16-107`	`-4.070`	`15`	`PB003564 gi\|46242789\|gb\|AAS83494.1\| TraD [Bacteroides fragilis]`
15	`gi\|16759008\|ref\|NP_454625.1\| hypothetical protein (STY0015) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`114`	`HGM_OVER`	`29-88`	`-5.090`	`10`	`PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;`
16	`gi\|16759009\|ref\|NP_454626.1\| hypothetical protein (STY0016) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`177`	`HGM_OVER`	`77-173`	`-5.750`	`17`	`HGC00485 gi\|163636056\|dbj\|BABG01000217.1\|3.0 TMP00523;`
17	`gi\|16759010\|ref\|NP_454627.1\| hypothetical protein (STY0017) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`147`	`HGM_OVER`	`1-107`	`-4.880`	`11`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`
18	`gi\|16759011\|ref\|NP_454628.1\| putative chitinase (STY0018) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`699`	`HGM_OVER`	`176-304`	`-4.670`	`17`	`PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;`
19	`gi\|16759012\|ref\|NP_454629.1\| hypothetical protein (STY0019) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`383`	`HGM_OVER`	`9-149`	`-4.410`	`8`	`PB009233 Q7MX23_PORGI/1-175 PB009233; Pfam-B_9233;`
20	`gi\|16759013\|ref\|NP_454630.1\| hypothetical protein (STY0020) [Salmonella enterica subsp. enterica serovar Typhi str. CT18]`	`620`	`HGM_OVER`	`355-521`	`-3.370`	`9`	`PB047496 gi\|150008556\|ref\|YP_001303299.1\| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi\|149936980\|gb\|ABR43677.1\| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]`