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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4946< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|16759014|ref|NP_454631.1| hypothetical protein (STY0021) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 234 PDB1018 10-229 -49.800 14  3iwz_A mol:protein length:230 Catabolite activation-like protein
22 gi|16759015|ref|NP_454632.1|(removed signalp:1-24) fimbrial subunit (STY0024) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 156 PDB1018 1-156 -67.600 46  5lp9_A mol:protein length:162 Major type 1 subunit fimbrin (Pilin)
23 gi|16759016|ref|NP_454633.1|(removed signalp:1-26) fimbrial chaperone (STY0025) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 202 PDB1018 2-202 -99.500 46  1l4i_A mol:protein length:206 SfaE PROTEIN
24 gi|16759017|ref|NP_454634.1|(removed signalp:1-21) fimbrial subunit (STY0029) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 314 PDB1018 2-314 -51.100 25  5afo_A mol:protein length:362 FIMBRIAE
25 gi|16759018|ref|NP_454635.1|(removed signalp:1-23) fimbrial subunit (STY0030) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 158 PDB1018 2-158 -66.500 34  5n2b_A mol:protein length:183 Putative fimbrial subunit type 1
26 gi|16759019|ref|NP_454636.1|(removed signalp:1-20) fimbrial subunit (STY0031) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 152 PDB1018 2-152 -67.400 25  5lp9_A mol:protein length:162 Major type 1 subunit fimbrin (Pilin)
27 gi|16759020|ref|NP_454637.1|(removed signalp:1-22) fimbrial chaperone (STY0032) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 212 PDB1018 1-209 -93.700 29  2co6_B mol:protein length:221 PUTATIVE FIMBRIAE ASSEMBLY CHAPERONE
28 gi|16759021|ref|NP_454638.1|(removed signalp:1-27) hypothetical protein (STY0033) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 254 PDB1018 12-254 -83.000 22  4xvw_A mol:protein length:224 DsbA-like protein
29 gi|16759022|ref|NP_454639.1| hypothetical protein (STY0034) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 95 PDB1018 1-95 -18.700 10  5n2b_A mol:protein length:183 Putative fimbrial subunit type 1
30 gi|16759023|ref|NP_454640.1| hypothetical protein (STY0035) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 149 PDB1018 8-107 -32.400 19  5ju7_A mol:protein length:110 Transcriptional activator CadC
17-143 -14.800 10  2fez_A mol:protein length:388 Probable regulatory protein embR
31 gi|16759024|ref|NP_454641.1| LysR family transcriptional regulator (STY0036) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 331 PDB1018 3-314 -95.400 17  1utb_A mol:protein length:315 LYSR-TYPE REGULATORY PROTEIN
32 gi|16759025|ref|NP_454642.1| putative transcriptional regulator (STY0038) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 101 PDB1018 8-101 -31.500 12  2hqn_A mol:protein length:109 Putative TRANSCRIPTIONAL REGULATOR
33 gi|16759026|ref|NP_454643.1| sulfatase (STY0039) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 572 PDB1018 44-569 -94.600 18  3elq_A mol:protein length:571 Arylsulfate sulfotransferase
34 gi|16759027|ref|NP_454644.1|(removed signalp:1-29) putative secreted 5'-nucleotidase (STY0040) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 494 PDB1018 2-493 -122.000 50  3ivd_A mol:protein length:509 Nucleotidase
35 gi|16759028|ref|NP_454645.1|(removed signalp:1-24) hypothetical protein (STY0041) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 229 PDB1018 1-229 -53.700 1tlw_A mol:protein length:278 Nucleoside-specific channel-forming protein tsx
36 gi|16759029|ref|NP_454646.1|(removed signalp:1-25) putative secreted sulfatase (STY0042) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 472 PDB1018 1-472 -147.000 89  3ed4_A mol:protein length:502 ARYLSULFATASE
37 gi|16759030|ref|NP_454647.1| sulfatase regulatory protein (STY0043) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 396 PDB1018 5-396 -111.000 30  4k36_A mol:protein length:392 Anaerobic sulfatase-maturating enzyme
38 gi|16759031|ref|NP_454648.1| hypothetical protein (STY0045) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 327 PDB1018 33-222 -7.610 2z9o_A mol:protein length:266 Replication initiation protein
39 gi|16759032|ref|NP_454649.1| sulfatase (STY0046) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 571 PDB1018 8-511 -10.300 5guw_M mol:protein length:568 Nitrite reductase
44-568 -96.700 18  3elq_A mol:protein length:571 Arylsulfate sulfotransferase
40 gi|16759033|ref|NP_454650.1| pH-dependent sodium/proton antiporter (STY0047) [Salmonella enterica subsp. enterica serovar Typhi str. CT18] 388 PDB1018 1-388 -119.000 91  4atv_A mol:protein length:401 NA(+)/H(+) ANTIPORTER NHAA


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.