FFAS03 list of results S.typhimurium / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4725 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16763391|ref|NP_459006.1| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 21 VFDB 1-20 -2.280 30 [T] KOG2417 Predicted G-protein coupled receptor
2 gi|16763392|ref|NP_459007.1| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 820 VFDB 1-481 -113.000 26 [E] COG0527 Aspartokinases
456-820 -83.000 68 [E] COG0460 Homoserine dehydrogenase
3 gi|16763393|ref|NP_459008.1| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 309 VFDB 2-309 -96.900 70 [E] COG0083 Homoserine kinase
4 gi|16763394|ref|NP_459009.1| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 428 VFDB 1-427 -103.000 27 [E] COG0498 Threonine synthase
5 gi|16763395|ref|NP_459010.1| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 257 VFDB 1-257 -110.000 86 [S] COG3022 Uncharacterized protein conserved in bacteria
6 gi|16763396|ref|NP_459011.1| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 476 VFDB 1-471 -123.000 43 [E] COG1115 Na+/alanine symporter
7 gi|16763397|ref|NP_459012.1| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 317 VFDB 1-317 -104.000 87 [G] COG0176 Transaldolase
8 gi|16763398|ref|NP_459013.1| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 196 VFDB 2-191 -69.200 74 [H] COG0521 Molybdopterin biosynthesis enzymes
9 gi|16763399|ref|NP_459014.1| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 188 VFDB 3-184 -91.400 65 [S] COG1584 Predicted membrane protein
10 gi|16763400|ref|NP_459015.1| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 237 VFDB 1-237 -81.000 87 [S] COG4735 Uncharacterized protein conserved in bacteria
11 gi|16763401|ref|NP_459016.1|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 111 VFDB 2-111 -6.770 9 [S] COG4425 Predicted membrane protein
12 gi|16763402|ref|NP_459017.1| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 638 VFDB 1-638 -163.000 56 [O] COG0443 Molecular chaperone
13 gi|16763403|ref|NP_459018.1| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 379 VFDB 1-375 -124.000 58 [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain
14 gi|16763404|ref|NP_459019.1| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 315 VFDB 7-313 -31.100 13 [K] COG0583 Transcriptional regulator
15 gi|16763405|ref|NP_459020.1| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 114 VFDB 18-94 -10.200 13 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation
16 gi|16763406|ref|NP_459021.1| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 177 VFDB 1-177 -75.000 25 [R] COG3926 Putative secretion activating protein
17 gi|16763407|ref|NP_459022.1| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 147 VFDB 2-140 -42.900 15 [K] COG3710 DNA-binding winged-HTH domains
18 gi|16763408|ref|NP_459023.1| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 699 VFDB 1-512 -123.000 100 [G] COG3325 Chitinase
30-699 -31.900 9 [R] COG3858 Predicted glycosyl hydrolase
19 gi|16763409|ref|NP_459024.1| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 998 VFDB 1-564 -9.900 11 [M] COG4932 Predicted outer membrane protein
20 gi|16763410|ref|NP_459025.1| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 234 VFDB 4-233 -15.200 8 [T] KOG1113 cAMP-dependent protein kinase types I and II, regulatory subunit
44-228 -33.800 12 [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|16763391\|ref\|NP_459006.1\| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`21`	`VFDB`	`1-20`	`-2.280`	`30`	`[T] KOG2417 Predicted G-protein coupled receptor`
2	`gi\|16763392\|ref\|NP_459007.1\| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`820`	`VFDB`	`1-481`	`-113.000`	`26`	`[E] COG0527 Aspartokinases`
				`456-820`	`-83.000`	`68`	`[E] COG0460 Homoserine dehydrogenase`
3	`gi\|16763393\|ref\|NP_459008.1\| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`309`	`VFDB`	`2-309`	`-96.900`	`70`	`[E] COG0083 Homoserine kinase`
4	`gi\|16763394\|ref\|NP_459009.1\| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`428`	`VFDB`	`1-427`	`-103.000`	`27`	`[E] COG0498 Threonine synthase`
5	`gi\|16763395\|ref\|NP_459010.1\| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`257`	`VFDB`	`1-257`	`-110.000`	`86`	`[S] COG3022 Uncharacterized protein conserved in bacteria`
6	`gi\|16763396\|ref\|NP_459011.1\| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`476`	`VFDB`	`1-471`	`-123.000`	`43`	`[E] COG1115 Na+/alanine symporter`
7	`gi\|16763397\|ref\|NP_459012.1\| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`317`	`VFDB`	`1-317`	`-104.000`	`87`	`[G] COG0176 Transaldolase`
8	`gi\|16763398\|ref\|NP_459013.1\| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`196`	`VFDB`	`2-191`	`-69.200`	`74`	`[H] COG0521 Molybdopterin biosynthesis enzymes`
9	`gi\|16763399\|ref\|NP_459014.1\| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`188`	`VFDB`	`3-184`	`-91.400`	`65`	`[S] COG1584 Predicted membrane protein`
10	`gi\|16763400\|ref\|NP_459015.1\| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`237`	`VFDB`	`1-237`	`-81.000`	`87`	`[S] COG4735 Uncharacterized protein conserved in bacteria`
11	`gi\|16763401\|ref\|NP_459016.1\|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`111`	`VFDB`	`2-111`	`-6.770`	`9`	`[S] COG4425 Predicted membrane protein`
12	`gi\|16763402\|ref\|NP_459017.1\| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`638`	`VFDB`	`1-638`	`-163.000`	`56`	`[O] COG0443 Molecular chaperone`
13	`gi\|16763403\|ref\|NP_459018.1\| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`379`	`VFDB`	`1-375`	`-124.000`	`58`	`[O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain`
14	`gi\|16763404\|ref\|NP_459019.1\| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`315`	`VFDB`	`7-313`	`-31.100`	`13`	`[K] COG0583 Transcriptional regulator`
15	`gi\|16763405\|ref\|NP_459020.1\| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`114`	`VFDB`	`18-94`	`-10.200`	`13`	`[D] COG0239 Integral membrane protein possibly involved in chromosome condensation`
16	`gi\|16763406\|ref\|NP_459021.1\| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`177`	`VFDB`	`1-177`	`-75.000`	`25`	`[R] COG3926 Putative secretion activating protein`
17	`gi\|16763407\|ref\|NP_459022.1\| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`147`	`VFDB`	`2-140`	`-42.900`	`15`	`[K] COG3710 DNA-binding winged-HTH domains`
18	`gi\|16763408\|ref\|NP_459023.1\| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`699`	`VFDB`	`1-512`	`-123.000`	`100`	`[G] COG3325 Chitinase`
				`30-699`	`-31.900`	`9`	`[R] COG3858 Predicted glycosyl hydrolase`
19	`gi\|16763409\|ref\|NP_459024.1\| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`998`	`VFDB`	`1-564`	`-9.900`	`11`	`[M] COG4932 Predicted outer membrane protein`
20	`gi\|16763410\|ref\|NP_459025.1\| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`234`	`VFDB`	`4-233`	`-15.200`	`8`	`[T] KOG1113 cAMP-dependent protein kinase types I and II, regulatory subunit`
				`44-228`	`-33.800`	`12`	`[T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases`