FFAS03 list of results SCOP207 / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 14323 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 136 VFDB 3-135 -44.700 11 [C] COG1017 Hemoglobin-like flavoprotein
22 d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina arenicola, also known as Molpadia arenicola [TaxId: 7698]} 157 VFDB 12-157 -50.600 17 [C] COG1017 Hemoglobin-like flavoprotein
23 d1tu9a1 a.1.1.2 (A:2-130) Hypothetical protein PA3967 {Pseudomonas aeruginosa [TaxId: 287]} 129 VFDB 1-128 -44.300 16 [C] COG1017 Hemoglobin-like flavoprotein
24 d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]} 146 VFDB 2-146 -52.200 15 [C] COG1017 Hemoglobin-like flavoprotein
25 d1naza_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]} 154 VFDB 2-150 -43.100 15 [C] COG1017 Hemoglobin-like flavoprotein
26 d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]} 148 VFDB 1-148 -53.600 17 [C] COG1017 Hemoglobin-like flavoprotein
27 d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]} 147 VFDB 2-147 -41.500 12 [C] COG1017 Hemoglobin-like flavoprotein
28 d2w72a_ a.1.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]} 141 VFDB 1-141 -48.200 18 [C] COG1017 Hemoglobin-like flavoprotein
29 d3qm9a_ a.1.1.2 (A:) automated matches {Thunnus atlanticus [TaxId: 48168]} 145 VFDB 1-144 -43.900 10 [C] COG1017 Hemoglobin-like flavoprotein
30 d3qqqa_ a.1.1.2 (A:) automated matches {Trema tomentosa [TaxId: 3480]} 151 VFDB 1-150 -52.700 17 [C] COG1017 Hemoglobin-like flavoprotein
31 d3l0fa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Thermosynechococcus elongatus [TaxId: 197221]} 162 VFDB 5-145 -6.090 13 [S] COG2979 Uncharacterized protein conserved in bacteria
32 d1b8da_ a.1.1.3 (A:) Phycoerythrin alpha subunit {Red alga (Griffithsia monilis) [TaxId: 42003]} 164 VFDB 4-164 -6.390 15 [U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)
33 d1xg0c_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]} 175 VFDB 2-141 -6.240 12 [S] COG2979 Uncharacterized protein conserved in bacteria
34 d4po5b_ a.1.1.3 (B:) automated matches {Synechocystis sp. [TaxId: 1111708]} 161 VFDB 5-142 -5.690 15 [S] COG2979 Uncharacterized protein conserved in bacteria
35 d2xkia_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]} 110 VFDB 5-110 -34.600 13 [C] COG1017 Hemoglobin-like flavoprotein
36 d2wy4a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]} 139 VFDB 1-139 -66.800 38 [C] COG1017 Hemoglobin-like flavoprotein
37 d2ig3a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]} 127 VFDB 1-125 -46.700 16 [R] COG2346 Truncated hemoglobins
38 d3pt8a_ a.1.1.0 (A:) automated matches {Clam (Lucina pectinata) [TaxId: 244486]} 151 VFDB 3-151 -52.600 16 [C] COG1017 Hemoglobin-like flavoprotein
39 d2bk9a_ a.1.1.0 (A:) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} 153 VFDB 1-153 -50.100 17 [C] COG1017 Hemoglobin-like flavoprotein
40 d2c0ka_ a.1.1.0 (A:) automated matches {Gasterophilus intestinalis [TaxId: 84525]} 150 VFDB 1-150 -49.500 12 [C] COG1017 Hemoglobin-like flavoprotein

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]}`	`136`	`VFDB`	`3-135`	`-44.700`	`11`	`[C] COG1017 Hemoglobin-like flavoprotein`
22	`d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina arenicola, also known as Molpadia arenicola [TaxId: 7698]}`	`157`	`VFDB`	`12-157`	`-50.600`	`17`	`[C] COG1017 Hemoglobin-like flavoprotein`
23	`d1tu9a1 a.1.1.2 (A:2-130) Hypothetical protein PA3967 {Pseudomonas aeruginosa [TaxId: 287]}`	`129`	`VFDB`	`1-128`	`-44.300`	`16`	`[C] COG1017 Hemoglobin-like flavoprotein`
24	`d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}`	`146`	`VFDB`	`2-146`	`-52.200`	`15`	`[C] COG1017 Hemoglobin-like flavoprotein`
25	`d1naza_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]}`	`154`	`VFDB`	`2-150`	`-43.100`	`15`	`[C] COG1017 Hemoglobin-like flavoprotein`
26	`d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]}`	`148`	`VFDB`	`1-148`	`-53.600`	`17`	`[C] COG1017 Hemoglobin-like flavoprotein`
27	`d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]}`	`147`	`VFDB`	`2-147`	`-41.500`	`12`	`[C] COG1017 Hemoglobin-like flavoprotein`
28	`d2w72a_ a.1.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}`	`141`	`VFDB`	`1-141`	`-48.200`	`18`	`[C] COG1017 Hemoglobin-like flavoprotein`
29	`d3qm9a_ a.1.1.2 (A:) automated matches {Thunnus atlanticus [TaxId: 48168]}`	`145`	`VFDB`	`1-144`	`-43.900`	`10`	`[C] COG1017 Hemoglobin-like flavoprotein`
30	`d3qqqa_ a.1.1.2 (A:) automated matches {Trema tomentosa [TaxId: 3480]}`	`151`	`VFDB`	`1-150`	`-52.700`	`17`	`[C] COG1017 Hemoglobin-like flavoprotein`
31	`d3l0fa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Thermosynechococcus elongatus [TaxId: 197221]}`	`162`	`VFDB`	`5-145`	`-6.090`	`13`	`[S] COG2979 Uncharacterized protein conserved in bacteria`
32	`d1b8da_ a.1.1.3 (A:) Phycoerythrin alpha subunit {Red alga (Griffithsia monilis) [TaxId: 42003]}`	`164`	`VFDB`	`4-164`	`-6.390`	`15`	`[U] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)`
33	`d1xg0c_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]}`	`175`	`VFDB`	`2-141`	`-6.240`	`12`	`[S] COG2979 Uncharacterized protein conserved in bacteria`
34	`d4po5b_ a.1.1.3 (B:) automated matches {Synechocystis sp. [TaxId: 1111708]}`	`161`	`VFDB`	`5-142`	`-5.690`	`15`	`[S] COG2979 Uncharacterized protein conserved in bacteria`
35	`d2xkia_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]}`	`110`	`VFDB`	`5-110`	`-34.600`	`13`	`[C] COG1017 Hemoglobin-like flavoprotein`
36	`d2wy4a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]}`	`139`	`VFDB`	`1-139`	`-66.800`	`38`	`[C] COG1017 Hemoglobin-like flavoprotein`
37	`d2ig3a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]}`	`127`	`VFDB`	`1-125`	`-46.700`	`16`	`[R] COG2346 Truncated hemoglobins`
38	`d3pt8a_ a.1.1.0 (A:) automated matches {Clam (Lucina pectinata) [TaxId: 244486]}`	`151`	`VFDB`	`3-151`	`-52.600`	`16`	`[C] COG1017 Hemoglobin-like flavoprotein`
39	`d2bk9a_ a.1.1.0 (A:) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}`	`153`	`VFDB`	`1-153`	`-50.100`	`17`	`[C] COG1017 Hemoglobin-like flavoprotein`
40	`d2c0ka_ a.1.1.0 (A:) automated matches {Gasterophilus intestinalis [TaxId: 84525]}`	`150`	`VFDB`	`1-150`	`-49.500`	`12`	`[C] COG1017 Hemoglobin-like flavoprotein`