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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 1872< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 TM0021 TM0021 281902 PDB-2003-02-27 102 H.sapiens 5-98 -6.670 sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
22 TM0022 TM0022 281903 Purified-2006-07-20 516 H.sapiens 6-294 -87.700 33  sp|P40692|MLH1_HUMAN DNA mismatch repair protein Mlh1 OS=Homo sapiens GN=MLH1 PE=1 SV=1
151-336 -54.400 25  sp|P40692|MLH1_HUMAN DNA mismatch repair protein Mlh1 OS=Homo sapiens GN=MLH1 PE=1 SV=1
293-513 -44.700 16  sp|P54278|PMS2_HUMAN Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=2
23 TM0023 TM0023 281904 Purified-2001-08-24 656 H.sapiens 6-270 -21.300 sp|Q5VU97|CAHD1_HUMAN(removed signalp:1-37) VWFA and cache domain-containing protein 1 OS=Homo sapiens GN=CACHD1 PE=1 SV=2
274-544 -20.600 sp|Q6AZY7|SCAR3_HUMAN Scavenger receptor class A member 3 OS=Homo sapiens GN=SCARA3 PE=2 SV=1
335-640 -23.100 11  sp|Q9Y6N6|LAMC3_HUMAN(removed signalp:1-19) Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=2 SV=3
24 TM0024 TM0024 281905 Purified-2001-08-24 642 H.sapiens 255-459 -7.370 15  sp|O15537|XLRS1_HUMAN(removed signalp:1-21) Retinoschisin OS=Homo sapiens GN=RS1 PE=1 SV=2
25 TM0025 TM0025 281906 Purified-2001-01-30 721 H.sapiens 606-690 -7.360 15  sp|P43308|SSRB_HUMAN(removed signalp:1-17) Translocon-associated protein subunit beta OS=Homo sapiens GN=SSR2 PE=1 SV=1
26 TM0026 TM0026 281907 Purified-2001-01-30 68 H.sapiens 1-62 -14.100 17  sp|Q16821|PPR3A_HUMAN Protein phosphatase 1 regulatory subunit 3A OS=Homo sapiens GN=PPP1R3A PE=1 SV=3
27 TM0027 TM0027 281908 Purified-2001-01-30 268 H.sapiens 2-260 -45.200 18  sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1
19-238 -46.800 22  sp|Q03519|TAP2_HUMAN(removed signalp:1-28) Antigen peptide transporter 2 OS=Homo sapiens GN=TAP2 PE=1 SV=1
28 TM0028 TM0028 281909 Purified-2001-08-29 330 H.sapiens 2-283 -39.600 24  sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9 PE=1 SV=1
29 TM0029 TM0029 281910 Purified-2001-01-30 280 H.sapiens 13-228 -7.640 12  sp|Q9BSE2|TMM79_HUMAN Transmembrane protein 79 OS=Homo sapiens GN=TMEM79 PE=1 SV=1
30 TM0030 TM0030 281911 Purified-2001-01-30 338 H.sapiens 204-337 -7.200 14  sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1 SV=2
31 TM0031 TM0031 281912 Purified-2001-08-24 606 H.sapiens 72-249 -6.040 12  sp|Q86YD3|TMM25_HUMAN(removed signalp:1-26) Transmembrane protein 25 OS=Homo sapiens GN=TMEM25 PE=1 SV=1
32 TM0032 TM0032 281913 Purified-2005-03-03 381 H.sapiens 1-263 -65.600 20  sp|Q9Y223|GLCNE_HUMAN Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase OS=Homo sapiens GN=GNE PE=1 SV=1
127-380 -63.300 22  sp|Q9Y223|GLCNE_HUMAN Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase OS=Homo sapiens GN=GNE PE=1 SV=1
33 TM0033 TM0033 281914 Purified-2001-08-24 395 H.sapiens 14-332 -18.500 13  sp|P42658|DPP6_HUMAN Dipeptidyl aminopeptidase-like protein 6 OS=Homo sapiens GN=DPP6 PE=1 SV=2
61-359 -21.200 15  sp|Q8N608|DPP10_HUMAN Inactive dipeptidyl peptidase 10 OS=Homo sapiens GN=DPP10 PE=1 SV=2
144-395 -29.500 12  sp|P10768|ESTD_HUMAN S-formylglutathione hydrolase OS=Homo sapiens GN=ESD PE=1 SV=2
34 TM0034 TM0034 281915 Purified-2001-08-29 357 H.sapiens 11-243 -16.500 12  sp|P06213|INSR_HUMAN(removed signalp:1-27) Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
187-253 -28.000 31  sp|O00217|NDUS8_HUMAN(removed signalp:1-19) NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Homo sapiens GN=NDUFS8 PE=1 SV=1
194-357 -20.000 15  sp|Q9UHQ1|NARF_HUMAN Nuclear prelamin A recognition factor OS=Homo sapiens GN=NARF PE=1 SV=1
35 TM0035 TM0035 281916 Purified-2001-08-24 485 H.sapiens 9-70 -8.070 16  sp|O15353|FOXN1_HUMAN Forkhead box protein N1 OS=Homo sapiens GN=FOXN1 PE=2 SV=1
36 TM0036 TM0036 281917 Purified-2001-08-24 174 H.sapiens 2-171 -53.400 41  sp|Q9BSD7|CA057_HUMAN Nucleoside-triphosphatase C1orf57 OS=Homo sapiens GN=C1orf57 PE=1 SV=1
37 TM0037 TM0037 281918 Purified-2001-08-24 416 H.sapiens 201-384 -11.500 13  sp|Q7Z4H3|HDDC2_HUMAN HD domain-containing protein 2 OS=Homo sapiens GN=HDDC2 PE=1 SV=1
38 TM0038 TM0038 281919 Purified-2001-02-14 120 H.sapiens 1-118 -64.200 39  sp|Q03393|PTPS_HUMAN 6-pyruvoyl tetrahydrobiopterin synthase OS=Homo sapiens GN=PTS PE=1 SV=1
39 TM0039 TM0039 281920 Crystal|NMR-2008-01-13 259 H.sapiens 41-213 -6.500 10  sp|Q7Z6L1|TCPR1_HUMAN(removed signalp:1-17) Tectonin beta-propeller repeat-containing protein 1 OS=Homo sapiens GN=TECPR1 PE=1 SV=1
40 TM0040 TM0040 281921 Purified-2003-03-06 278 H.sapiens 28-223 -15.700 22  sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Doctor KS, Reed JC, Godzik A., Bourne PE. The apoptosis database. Cell Death Differ. 2003 Jun;10(6):621-33. Review.