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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 1872< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 TM0021 TM0021 281902 PDB-2003-02-27 102 NEW_HUMAN_DOMAINS 25-69 -6.230 17  sp|Q86YW5|TRML1_HUMAN Trem-like transcript 1 protein OS=Homo sapiens GN=TREML1 PE=1 SV=2
22 TM0022 TM0022 281903 Purified-2006-07-20 516 NEW_HUMAN_DOMAINS 2-133 -4.560 10  sp|Q96BQ1|FAM3D_HUMAN Protein FAM3D OS=Homo sapiens GN=FAM3D PE=1 SV=1
23 TM0023 TM0023 281904 Purified-2001-08-24 656 NEW_HUMAN_DOMAINS 289-655 -6.200 sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
24 TM0024 TM0024 281905 Purified-2001-08-24 642 NEW_HUMAN_DOMAINS 248-347 -5.750 12  tr|E9PRJ1|E9PRJ1_HUMAN Uncharacterized protein OS=Homo sapiens GN=AGBL2 PE=4 SV=1
25 TM0025 TM0025 281906 Purified-2001-01-30 721 NEW_HUMAN_DOMAINS 114-362 -7.310 13  sp|Q96IK5|GMCL1_HUMAN Germ cell-less protein-like 1 OS=Homo sapiens GN=GMCL1 PE=1 SV=1
26 TM0026 TM0026 281907 Purified-2001-01-30 68 NEW_HUMAN_DOMAINS 1-64 -5.630 14  sp|C9JH25|PRRT4_HUMAN Proline-rich transmembrane protein 4 OS=Homo sapiens GN=PRRT4 PE=2 SV=1
27 TM0027 TM0027 281908 Purified-2001-01-30 268 NEW_HUMAN_DOMAINS 132-214 -7.090 13  sp|Q5H9F3|BCORL_HUMAN BCL-6 corepressor-like protein 1 OS=Homo sapiens GN=BCORL1 PE=1 SV=1
28 TM0028 TM0028 281909 Purified-2001-08-29 330 NEW_HUMAN_DOMAINS 8-56 -5.760 12  sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3
29 TM0029 TM0029 281910 Purified-2001-01-30 280 NEW_HUMAN_DOMAINS 149-226 -6.050 sp|Q9H7Z3|CN102_HUMAN UPF0614 protein C14orf102 OS=Homo sapiens GN=C14orf102 PE=1 SV=3
30 TM0030 TM0030 281911 Purified-2001-01-30 338 NEW_HUMAN_DOMAINS 66-332 -5.390 12  sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
31 TM0031 TM0031 281912 Purified-2001-08-24 606 NEW_HUMAN_DOMAINS 84-171 -5.390 sp|P08F94|PKHD1_HUMAN Fibrocystin OS=Homo sapiens GN=PKHD1 PE=1 SV=1
32 TM0032 TM0032 281913 Purified-2005-03-03 381 NEW_HUMAN_DOMAINS 1-66 -6.720 15  tr|B7Z293|B7Z293_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=2 SV=1
33 TM0033 TM0033 281914 Purified-2001-08-24 395 NEW_HUMAN_DOMAINS 191-301 -7.540 18  sp|O94830|DDHD2_HUMAN Phospholipase DDHD2 OS=Homo sapiens GN=DDHD2 PE=1 SV=2
34 TM0034 TM0034 281915 Purified-2001-08-29 357 NEW_HUMAN_DOMAINS 185-241 -10.400 22  sp|Q6ZRI0|OTOG_HUMAN Otogelin OS=Homo sapiens GN=OTOG PE=2 SV=3
35 TM0035 TM0035 281916 Purified-2001-08-24 485 NEW_HUMAN_DOMAINS 2-103 -5.110 15  sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2
36 TM0036 TM0036 281917 Purified-2001-08-24 174 NEW_HUMAN_DOMAINS 3-26 -9.850 sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3
37 TM0037 TM0037 281918 Purified-2001-08-24 416 NEW_HUMAN_DOMAINS 221-262 -6.630 16  sp|P28290|SSFA2_HUMAN Sperm-specific antigen 2 OS=Homo sapiens GN=SSFA2 PE=1 SV=3
38 TM0038 TM0038 281919 Purified-2001-02-14 120 NEW_HUMAN_DOMAINS 9-119 -8.560 11  sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1 SV=1
39 TM0039 TM0039 281920 Crystal|NMR-2008-01-13 259 NEW_HUMAN_DOMAINS 1-215 -6.960 11  sp|Q9H7M6|ZSWM4_HUMAN Zinc finger SWIM domain-containing protein 4 OS=Homo sapiens GN=ZSWIM4 PE=2 SV=3
40 TM0040 TM0040 281921 Purified-2003-03-06 278 NEW_HUMAN_DOMAINS 9-187 -5.460 15  tr|E9PB54|E9PB54_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZFYVE28 PE=4 SV=1


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24