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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 1872< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 TM0021 TM0021 281902 PDB-2003-02-27 102 SCOP207 1-102 -54.200 41  d2dcla_ d.58.5.0 (A:) automated matches {Pyrococcus horikoshii [TaxId: 53953]}
22 TM0022 TM0022 281903 Purified-2006-07-20 516 SCOP207 7-219 -82.300 40  d1b63a2 d.122.1.2 (A:1-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
218-329 -39.800 24  d1b63a1 d.14.1.3 (A:217-331) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
354-516 -26.400 13  d1x9za_ d.292.1.1 (A:) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
23 TM0023 TM0023 281904 Purified-2001-08-24 656 SCOP207 30-278 -27.200 13  d3c8ca1 d.110.6.4 (A:63-300) VC_A0923 {Vibrio cholerae [TaxId: 243277]}
24 TM0024 TM0024 281905 Purified-2001-08-24 642 SCOP207 210-460 -82.300 51  d3atga_ b.29.1.2 (A:) automated matches {Cellulosimicrobium cellulans [TaxId: 1710]}
280-553 -47.100 19  d3h0oa_ b.29.1.2 (A:) automated matches {Fibrobacter succinogenes [TaxId: 833]}
488-642 -24.100 99  d1guia_ b.18.1.14 (A:) Carbohydrate binding module from laminarinase 16A {Thermotoga maritima [TaxId: 2336]}
25 TM0025 TM0025 281906 Purified-2001-01-30 721 SCOP207 2-318 -109.000 95  d2x42a1 c.1.8.7 (A:2-319) Beta-glucosidase {Thermotoga neapolitana [TaxId: 309803]}
320-599 -86.900 87  d2x42a2 c.23.11.1 (A:320-599) Beta-glucosidase middle domain {Thermotoga neapolitana [TaxId: 309803]}
600-721 -60.500 78  d2x42a3 b.1.31.1 (A:600-721) Beta-glucosidase C-terminal domain {Thermotoga neapolitana [TaxId: 309803]}
26 TM0026 TM0026 281907 Purified-2001-01-30 68 SCOP207 19-66 -6.230 24  d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
27 TM0027 TM0027 281908 Purified-2001-01-30 268 SCOP207 3-254 -75.400 29  d3tuic1 c.37.1.12 (C:1-240) automated matches {Escherichia coli K-12 [TaxId: 83333]}
28 TM0028 TM0028 281909 Purified-2001-08-29 330 SCOP207 5-258 -67.900 26  d3tuic1 c.37.1.12 (C:1-240) automated matches {Escherichia coli K-12 [TaxId: 83333]}
29 TM0029 TM0029 281910 Purified-2001-01-30 280 SCOP207 65-274 -24.300 14  d3tuia_ f.58.1.1 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
30 TM0030 TM0030 281911 Purified-2001-01-30 338 SCOP207 101-333 -16.900 14  d3tuia_ f.58.1.1 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
31 TM0031 TM0031 281912 Purified-2001-08-24 606 SCOP207 24-572 -115.000 30  d4pfya1 c.94.1.1 (A:21-557) Oligo-peptide binding protein (OPPA) {Thermotoga maritima [TaxId: 2336]}
32 TM0032 TM0032 281913 Purified-2005-03-03 381 SCOP207 8-74 -31.300 25  d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
77-201 -33.200 18  d1z05a3 c.55.1.10 (A:81-208) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}
203-376 -52.000 15  d1z05a2 c.55.1.10 (A:209-405) Transcriptional regulator VC2007 {Vibrio cholerae [TaxId: 666]}
33 TM0033 TM0033 281914 Purified-2001-08-24 395 SCOP207 24-393 -18.600 11  d2jbwa1 c.69.1.41 (A:8-365) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]}
149-395 -33.300 17  d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]}
34 TM0034 TM0034 281915 Purified-2001-08-29 357 SCOP207 188-316 -39.100 18  d1jnrb_ d.58.1.5 (B:) Adenylylsulfate reductase B subunit {Archaeoglobus fulgidus [TaxId: 2234]}
189-357 -19.300 18  d1kqfb1 d.58.1.5 (B:2-245) Formate dehydrogenase N, iron-sulfur (beta) subunit {Escherichia coli [TaxId: 562]}
35 TM0035 TM0035 281916 Purified-2001-08-24 485 SCOP207 2-138 -7.100 19  d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]}
36 TM0036 TM0036 281917 Purified-2001-08-24 174 SCOP207 2-171 -53.500 41  d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
37 TM0037 TM0037 281918 Purified-2001-08-24 416 SCOP207 18-134 -11.600 19  d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889 {Listeria innocua [TaxId: 1642]}
116-344 -14.000 11  d3m1ta1 a.211.1.0 (A:1-274) automated matches {Shewanella amazonensis [TaxId: 326297]}
201-415 -11.600 12  d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664 {Lactobacillus plantarum [TaxId: 1590]}
220-384 -12.500 14  d5tk8a_ a.211.1.0 (A:) automated matches {Bacillus megaterium [TaxId: 1404]}
38 TM0038 TM0038 281919 Purified-2001-02-14 120 SCOP207 1-118 -63.700 36  d4ntka_ d.96.1.0 (A:) automated matches {Escherichia coli [TaxId: 469008]}
39 TM0039 TM0039 281920 Crystal|NMR-2008-01-13 259 SCOP207 155-224 -5.870 8  d4ntka_ d.96.1.0 (A:) automated matches {Escherichia coli [TaxId: 469008]}
40 TM0040 TM0040 281921 Purified-2003-03-06 278 SCOP207 14-277 -92.200 42  d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.