current user: public

If you have questions about the server, please let us know.

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 8581next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 [H] COG0001 Glutamate-1-semialdehyde aminotransferase 411 H.sapiens 19-411 -52.500 23  sp|Q9BYV1|AGT2_HUMAN(removed signalp:1-24) Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo sapiens GN=AGXT2 PE=1 SV=1
2 [E] COG0002 Acetylglutamate semialdehyde dehydrogenase 336 H.sapiens 1-324 -17.700 12  sp|P04406|G3P_HUMAN Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3
3 [P] COG0003 Oxyanion-translocating ATPase 396 H.sapiens 1-314 -67.000 22  sp|O43681|ASNA_HUMAN ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2
4 [P] COG0004 Ammonia permease 470 H.sapiens 43-459 -84.700 17  sp|Q9H310|RHBG_HUMAN(removed signalp:1-27) Ammonium transporter Rh type B OS=Homo sapiens GN=RHBG PE=1 SV=2
5 [F] COG0005 Purine nucleoside phosphorylase 271 H.sapiens 1-271 -101.000 45  sp|P00491|PNPH_HUMAN Purine nucleoside phosphorylase OS=Homo sapiens GN=PNP PE=1 SV=2
6 [E] COG0006 Xaa-Pro aminopeptidase 356 H.sapiens 1-354 -61.000 24  sp|P12955|PEPD_HUMAN Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3
105-356 -65.000 18  sp|Q9Y5B9|SP16H_HUMAN FACT complex subunit SPT16 OS=Homo sapiens GN=SUPT16H PE=1 SV=1
7 [H] COG0007 Uroporphyrinogen-III methylase 292 H.sapiens 27-269 -50.900 14  sp|Q9H2P9|DPH5_HUMAN Diphthine synthase OS=Homo sapiens GN=DPH5 PE=1 SV=2
8 [J] COG0008 Glutamyl- and glutaminyl-tRNA synthetases 554 H.sapiens 1-510 -89.700 13  sp|Q5JPH6|SYEM_HUMAN Probable glutamyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=EARS2 PE=1 SV=2
2-286 -103.000 40  sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5
65-374 -101.000 48  sp|P47897|SYQ_HUMAN Glutaminyl-tRNA synthetase OS=Homo sapiens GN=QARS PE=1 SV=1
287-554 -59.400 23  sp|P07814|SYEP_HUMAN Bifunctional aminoacyl-tRNA synthetase OS=Homo sapiens GN=EPRS PE=1 SV=5
9 [J] COG0009 Putative translation factor (SUA5) 346 H.sapiens 1-242 -74.900 26  sp|Q86U90|YRDC_HUMAN YrdC domain-containing protein, mitochondrial OS=Homo sapiens GN=YRDC PE=1 SV=1
10 [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 306 H.sapiens 4-305 -96.500 37  sp|Q9BSE5|SPEB_HUMAN Agmatinase, mitochondrial OS=Homo sapiens GN=AGMAT PE=1 SV=2
11 [S] COG0011 Uncharacterized conserved protein 94 H.sapiens 4-82 -6.350 sp|Q01459|DIAC_HUMAN(removed signalp:1-38) Di-N-acetylchitobiase OS=Homo sapiens GN=CTBS PE=1 SV=1
12 [J] COG0012 Predicted GTPase, probable translation factor 397 H.sapiens 1-395 -95.200 24  sp|Q9NTK5|OLA1_HUMAN Obg-like ATPase 1 OS=Homo sapiens GN=OLA1 PE=1 SV=2
13 [J] COG0013 Alanyl-tRNA synthetase 872 H.sapiens 2-293 -99.200 40  sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
135-432 -92.500 38  sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
406-695 -76.600 30  sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
536-821 -72.900 24  sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1
562-860 -65.500 26  sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
14 [E] COG0014 Gamma-glutamyl phosphate reductase 417 H.sapiens 2-414 -65.600 15  sp|P47895|AL1A3_HUMAN Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2
90-395 -83.900 34  sp|P54886|P5CS_HUMAN Delta-1-pyrroline-5-carboxylate synthase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2
15 [F] COG0015 Adenylosuccinate lyase 431 H.sapiens 1-429 -107.000 26  sp|P30566|PUR8_HUMAN Adenylosuccinate lyase OS=Homo sapiens GN=ADSL PE=1 SV=2
16 [J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit 344 H.sapiens 2-343 -104.000 22  sp|Q9Y285|SYFA_HUMAN Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3
17 [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases 430 H.sapiens 2-430 -118.000 32  sp|O43776|SYNC_HUMAN Asparaginyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=NARS PE=1 SV=1
18 [J] COG0018 Arginyl-tRNA synthetase 556 H.sapiens 7-556 -121.000 19  sp|Q5T160|SYRM_HUMAN Probable arginyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=RARS2 PE=1 SV=1
19 [E] COG0019 Diaminopimelate decarboxylase 436 H.sapiens 19-433 -81.100 21  sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
20 [I] COG0020 Undecaprenyl pyrophosphate synthase 248 H.sapiens 1-248 -98.100 32  sp|Q86SQ9|DHDDS_HUMAN Dehydrodolichyl diphosphate synthase OS=Homo sapiens GN=DHDDS PE=2 SV=3

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 5 5 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.