FFAS03 list of results Y.pestis / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4334 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|16082718|ref|NP_395164.1| secretion chaperone (YPCD1.30c) [Yersinia pestis CO92] 168 VFDB 1-168 -42.800 15 [R] KOG0553 TPR repeat-containing protein
22 gi|16082719|ref|NP_395165.1| secreted effector protein (YPCD1.31c) [Yersinia pestis CO92] 326 VFDB 258-318 -7.300 13 [U] KOG3385 V-SNARE
23 gi|16082720|ref|NP_395166.1| low calcium response protein G (YPCD1.32c) [Yersinia pestis CO92] 95 VFDB 14-62 -5.550 16 [B] KOG1757 Histone 2A
24 gi|16082721|ref|NP_395167.1| low calcium response protein R (YPCD1.33c) [Yersinia pestis CO92] 146 VFDB 4-146 -9.190 8 [S] COG5465 Uncharacterized conserved protein
25 gi|16082722|ref|NP_395168.1| low calcium response protein D (YPCD1.34c) [Yersinia pestis CO92] 704 VFDB 10-703 -141.000 34 [NU] COG1298 Flagellar biosynthesis pathway, component FlhA
26 gi|16082723|ref|NP_395169.1| hypothetical protein (YPCD1.35c) [Yersinia pestis CO92] 114 VFDB 2-113 -44.500 20 [R] KOG0553 TPR repeat-containing protein
27 gi|16082724|ref|NP_395170.1| hypothetical protein (YPCD1.36c) [Yersinia pestis CO92] 122 VFDB 55-122 -5.370 5 [S] COG1698 Uncharacterized protein conserved in archaea
28 gi|16082725|ref|NP_395171.1| hypothetical protein (YPCD1.37c) [Yersinia pestis CO92] 123 VFDB 6-120 -7.580 9 [S] COG5465 Uncharacterized conserved protein
29 gi|16082726|ref|NP_395172.1| Yop secretion and targeting control protein (YPCD1.38c) [Yersinia pestis CO92] 92 VFDB 34-92 -5.850 13 [S] KOG4273 Uncharacterized conserved protein
30 gi|16082727|ref|NP_395173.1| secretion control protein (YPCD1.39c) [Yersinia pestis CO92] 293 VFDB 35-277 -6.700 10 [J] COG1384 Lysyl-tRNA synthetase (class I)
31 gi|16082728|ref|NP_395174.1| type III secretion system ATPase (YPCD1.40) [Yersinia pestis CO92] 439 VFDB 1-439 -117.000 52 [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase
32 gi|16082729|ref|NP_395175.1| type III secretion apparatus component (YPCD1.41) [Yersinia pestis CO92] 154 VFDB 2-147 -18.500 13 [NUO] COG2882 Flagellar biosynthesis chaperone
33 gi|16082730|ref|NP_395176.1| type III secretion apparatus component (YPCD1.42) [Yersinia pestis CO92] 455 VFDB 24-346 -11.000 6 [R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)
353-446 -16.200 21 [N] COG3144 Flagellar hook-length control protein
34 gi|16082731|ref|NP_395177.1| type III secretion system protein (YPCD1.43) [Yersinia pestis CO92] 307 VFDB 157-307 -18.100 12 [N] COG1868 Flagellar motor switch protein
211-307 -30.500 23 [NU] COG1886 Flagellar motor switch/type III secretory pathway protein
35 gi|16082732|ref|NP_395178.1|(removed signalp:1-34) type III secretion system protein (YPCD1.44) [Yersinia pestis CO92] 183 VFDB 1-183 -99.700 100 [U] COG4790 Type III secretory pathway, component EscR
36 gi|16082733|ref|NP_395179.1|(removed signalp:1-28) needle complex export protein (YPCD1.45) [Yersinia pestis CO92] 60 VFDB 1-60 -40.500 100 [U] COG4794 Type III secretory pathway, component EscS
37 gi|16082734|ref|NP_395180.1| needle complex export protein (YPCD1.46) [Yersinia pestis CO92] 261 VFDB 1-261 -91.900 100 [U] COG4791 Type III secretory pathway, component EscT
38 gi|16082735|ref|NP_395181.1| needle complex export protein (YPCD1.47) [Yersinia pestis CO92] 354 VFDB 1-353 -116.000 34 [U] COG4792 Type III secretory pathway, component EscU
39 gi|16082736|ref|NP_395182.1|(removed signalp:1-23) needle complex outer membrane lipoprotein precursor (YPCD1.48) [Yersinia pestis CO92] 108 VFDB 2-97 -13.000 12 [S] COG3126 Uncharacterized protein conserved in bacteria
40 gi|16082737|ref|NP_395183.1| transcriptional regulator (YPCD1.49) [Yersinia pestis CO92] 271 VFDB 25-267 -49.400 16 [K] COG2207 AraC-type DNA-binding domain-containing proteins

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`gi\|16082718\|ref\|NP_395164.1\| secretion chaperone (YPCD1.30c) [Yersinia pestis CO92]`	`168`	`VFDB`	`1-168`	`-42.800`	`15`	`[R] KOG0553 TPR repeat-containing protein`
22	`gi\|16082719\|ref\|NP_395165.1\| secreted effector protein (YPCD1.31c) [Yersinia pestis CO92]`	`326`	`VFDB`	`258-318`	`-7.300`	`13`	`[U] KOG3385 V-SNARE`
23	`gi\|16082720\|ref\|NP_395166.1\| low calcium response protein G (YPCD1.32c) [Yersinia pestis CO92]`	`95`	`VFDB`	`14-62`	`-5.550`	`16`	`[B] KOG1757 Histone 2A`
24	`gi\|16082721\|ref\|NP_395167.1\| low calcium response protein R (YPCD1.33c) [Yersinia pestis CO92]`	`146`	`VFDB`	`4-146`	`-9.190`	`8`	`[S] COG5465 Uncharacterized conserved protein`
25	`gi\|16082722\|ref\|NP_395168.1\| low calcium response protein D (YPCD1.34c) [Yersinia pestis CO92]`	`704`	`VFDB`	`10-703`	`-141.000`	`34`	`[NU] COG1298 Flagellar biosynthesis pathway, component FlhA`
26	`gi\|16082723\|ref\|NP_395169.1\| hypothetical protein (YPCD1.35c) [Yersinia pestis CO92]`	`114`	`VFDB`	`2-113`	`-44.500`	`20`	`[R] KOG0553 TPR repeat-containing protein`
27	`gi\|16082724\|ref\|NP_395170.1\| hypothetical protein (YPCD1.36c) [Yersinia pestis CO92]`	`122`	`VFDB`	`55-122`	`-5.370`	`5`	`[S] COG1698 Uncharacterized protein conserved in archaea`
28	`gi\|16082725\|ref\|NP_395171.1\| hypothetical protein (YPCD1.37c) [Yersinia pestis CO92]`	`123`	`VFDB`	`6-120`	`-7.580`	`9`	`[S] COG5465 Uncharacterized conserved protein`
29	`gi\|16082726\|ref\|NP_395172.1\| Yop secretion and targeting control protein (YPCD1.38c) [Yersinia pestis CO92]`	`92`	`VFDB`	`34-92`	`-5.850`	`13`	`[S] KOG4273 Uncharacterized conserved protein`
30	`gi\|16082727\|ref\|NP_395173.1\| secretion control protein (YPCD1.39c) [Yersinia pestis CO92]`	`293`	`VFDB`	`35-277`	`-6.700`	`10`	`[J] COG1384 Lysyl-tRNA synthetase (class I)`
31	`gi\|16082728\|ref\|NP_395174.1\| type III secretion system ATPase (YPCD1.40) [Yersinia pestis CO92]`	`439`	`VFDB`	`1-439`	`-117.000`	`52`	`[NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase`
32	`gi\|16082729\|ref\|NP_395175.1\| type III secretion apparatus component (YPCD1.41) [Yersinia pestis CO92]`	`154`	`VFDB`	`2-147`	`-18.500`	`13`	`[NUO] COG2882 Flagellar biosynthesis chaperone`
33	`gi\|16082730\|ref\|NP_395176.1\| type III secretion apparatus component (YPCD1.42) [Yersinia pestis CO92]`	`455`	`VFDB`	`24-346`	`-11.000`	`6`	`[R] KOG2350 Zn-finger protein joined to JAZF1 (predicted suppressor)`
				`353-446`	`-16.200`	`21`	`[N] COG3144 Flagellar hook-length control protein`
34	`gi\|16082731\|ref\|NP_395177.1\| type III secretion system protein (YPCD1.43) [Yersinia pestis CO92]`	`307`	`VFDB`	`157-307`	`-18.100`	`12`	`[N] COG1868 Flagellar motor switch protein`
				`211-307`	`-30.500`	`23`	`[NU] COG1886 Flagellar motor switch/type III secretory pathway protein`
35	`gi\|16082732\|ref\|NP_395178.1\|(removed signalp:1-34) type III secretion system protein (YPCD1.44) [Yersinia pestis CO92]`	`183`	`VFDB`	`1-183`	`-99.700`	`100`	`[U] COG4790 Type III secretory pathway, component EscR`
36	`gi\|16082733\|ref\|NP_395179.1\|(removed signalp:1-28) needle complex export protein (YPCD1.45) [Yersinia pestis CO92]`	`60`	`VFDB`	`1-60`	`-40.500`	`100`	`[U] COG4794 Type III secretory pathway, component EscS`
37	`gi\|16082734\|ref\|NP_395180.1\| needle complex export protein (YPCD1.46) [Yersinia pestis CO92]`	`261`	`VFDB`	`1-261`	`-91.900`	`100`	`[U] COG4791 Type III secretory pathway, component EscT`
38	`gi\|16082735\|ref\|NP_395181.1\| needle complex export protein (YPCD1.47) [Yersinia pestis CO92]`	`354`	`VFDB`	`1-353`	`-116.000`	`34`	`[U] COG4792 Type III secretory pathway, component EscU`
39	`gi\|16082736\|ref\|NP_395182.1\|(removed signalp:1-23) needle complex outer membrane lipoprotein precursor (YPCD1.48) [Yersinia pestis CO92]`	`108`	`VFDB`	`2-97`	`-13.000`	`12`	`[S] COG3126 Uncharacterized protein conserved in bacteria`
40	`gi\|16082737\|ref\|NP_395183.1\| transcriptional regulator (YPCD1.49) [Yersinia pestis CO92]`	`271`	`VFDB`	`25-267`	`-49.400`	`16`	`[K] COG2207 AraC-type DNA-binding domain-containing proteins`