FFAS03 list of results HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 182 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; 217 CSGID 10-203 -9.570 15 IDP91435 DNA uptake lipoprotein [Vibrio vulnificus CMCP6] VV1_0485 [Vibrio vulnificus CMCP6]
2 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; 360 CSGID 1-186 -45.600 24 IDP04361 gene: bglB; putative beta-glucosidase [Yersinia pestis CO92] YPO2803 [Yersinia pestis CO92]
3 HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; 81 CSGID 1-63 -6.640 16 IDP92620 trans-2-enoyl-CoA reductase [Vibrio cholerae O395] VC0395_A1339 [Vibrio cholerae O395]
4 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; 227 CSGID 2-150 -6.110 8 IDP01318 DPS family protein VC0139 [Vibrio cholerae O1 biovar El Tor str. N16961]
5 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; 173 CSGID 1-173 -40.200 11 IDP93888 hipa protein [Yersinia enterocolitica subsp. palearctica Y11] YP_006006247 [Yersinia enterocolitica subsp. palearctica Y11]
6 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; 223 CSGID 34-219 -6.290 9 IDP92056 orotate phosphoribosyltransferase, putative [Toxoplasma gondii ME49] TGME49_059660 [Toxoplasma gondii ME49]
7 HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; 121 CSGID 1-121 -6.090 8 IDP91498 translocation protein in type III secretion [Vibrio parahaemolyticus RIMD 2210633] VP1675 [Vibrio parahaemolyticus RIMD 2210633]
8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066; 164 CSGID 3-127 -6.430 15 IDP01512 anthranilate synthase component II VC1173 [Vibrio cholerae O1 biovar El Tor str. N16961]
9 HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; 122 CSGID 32-119 -5.040 11 IDP95267 N-acetyl-anhydromuranmyl-L-alanine amidase [Acinetobacter baumannii ATCC 17978] YP_001083142 [Acinetobacter baumannii ATCC 17978]
10 HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; 200 CSGID 1-197 -6.730 10 IDP95146 hypothetical protein KP1_2907 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002919622 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
11 HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397; 274 CSGID 106-218 -4.870 9 IDP95010 Set165a_018 [Vibrio cholerae O1 biovar El Tor]
12 HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; 255 CSGID 5-134 -6.410 9 IDP05737 hypothetical protein CD1990 [Clostridium difficile 630] CD1990 [Peptoclostridium difficile 630]
13 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; 127 CSGID 18-96 -6.340 22 IDP06052 hypothetical protein jhp0557 [Helicobacter pylori J99] NP_223275 [Helicobacter pylori J99]
14 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; 136 CSGID 8-87 -6.370 17 IDP05509 gene: spoIIIJ2; stage III sporulation protein J [Bacillus anthracis str. Ames] BA_5736 [Bacillus anthracis str. Ames]
15 HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; 92 CSGID 55-86 -5.050 18 IDP04078 gene: YPCD1.09c; hypothetical protein YPCD1.09c [Yersinia pestis CO92] YPCD1.09c [Yersinia pestis CO92]
16 HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; 203 CSGID 15-84 -9.750 12 IDP95122 streptomycin 3``-adenylyltransferase [Staphylococcus aureus subsp. aureus CIG1242] EHT28025 [Staphylococcus aureus subsp. aureus CIG1242]
17 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; 115 CSGID 1-56 -9.600 21 IDP05521 putative cell surface protein [Clostridium difficile 630] CD1858 [Peptoclostridium difficile 630]
18 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; 125 CSGID 2-124 -18.800 10 IDP90419 gene: euo; CHLPS Euo Protein [Chlamydia trachomatis D/UW-3/CX] CT_446 [Chlamydia trachomatis D/UW-3/CX]
19 HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; 172 CSGID 1-145 -11.400 6 IDP02013 gene: pgtE; outer membrane protease [Salmonella typhimurium LT2] STM2395 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
20 HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; 112 CSGID 3-46 -5.510 8 IDP06373 gene: ORF17.5; ORF17.5 [Human herpesvirus 8] YP_001129370 [Human herpesvirus 8]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`HGC00024 gi\|162813637\|dbj\|BABA01031072.1\|2.0 TMP01508;`	`217`	`CSGID`	`10-203`	`-9.570`	`15`	`IDP91435 DNA uptake lipoprotein [Vibrio vulnificus CMCP6] VV1_0485 [Vibrio vulnificus CMCP6]`
2	`HGC00044 gi\|162658718\|dbj\|BAAX01000887.1\|1.0 TMP00920;`	`360`	`CSGID`	`1-186`	`-45.600`	`24`	`IDP04361 gene: bglB; putative beta-glucosidase [Yersinia pestis CO92] YPO2803 [Yersinia pestis CO92]`
3	`HGC00106 gi\|162841414\|dbj\|BABA01003295.1\|1.0 TMP01000;`	`81`	`CSGID`	`1-63`	`-6.640`	`16`	`IDP92620 trans-2-enoyl-CoA reductase [Vibrio cholerae O395] VC0395_A1339 [Vibrio cholerae O395]`
4	`HGC00150 gi\|162733542\|dbj\|BAAZ01030454.1\|1.0 TMP01074;`	`227`	`CSGID`	`2-150`	`-6.110`	`8`	`IDP01318 DPS family protein VC0139 [Vibrio cholerae O1 biovar El Tor str. N16961]`
5	`HGC00164 gi\|163636082\|dbj\|BABG01000191.1\|4.0 TMP00833;`	`173`	`CSGID`	`1-173`	`-40.200`	`11`	`IDP93888 hipa protein [Yersinia enterocolitica subsp. palearctica Y11] YP_006006247 [Yersinia enterocolitica subsp. palearctica Y11]`
6	`HGC00166 gi\|163579340\|dbj\|BABE01005762.1\|1.0 TMP00473;`	`223`	`CSGID`	`34-219`	`-6.290`	`9`	`IDP92056 orotate phosphoribosyltransferase, putative [Toxoplasma gondii ME49] TGME49_059660 [Toxoplasma gondii ME49]`
7	`HGC00248 gi\|162576253\|dbj\|BAAV01029229.1\|2.0 TMP00024;`	`121`	`CSGID`	`1-121`	`-6.090`	`8`	`IDP91498 translocation protein in type III secretion [Vibrio parahaemolyticus RIMD 2210633] VP1675 [Vibrio parahaemolyticus RIMD 2210633]`
8	`HGC00267 gi\|163310129\|dbj\|BABD01000566.1\|6.0 TMP00066;`	`164`	`CSGID`	`3-127`	`-6.430`	`15`	`IDP01512 anthranilate synthase component II VC1173 [Vibrio cholerae O1 biovar El Tor str. N16961]`
9	`HGC00311 gi\|163635536\|dbj\|BABG01000737.1\|2.0 TMP00178;`	`122`	`CSGID`	`32-119`	`-5.040`	`11`	`IDP95267 N-acetyl-anhydromuranmyl-L-alanine amidase [Acinetobacter baumannii ATCC 17978] YP_001083142 [Acinetobacter baumannii ATCC 17978]`
10	`HGC00374 gi\|162831834\|dbj\|BABA01012875.1\|1.0 TMP00304;`	`200`	`CSGID`	`1-197`	`-6.730`	`10`	`IDP95146 hypothetical protein KP1_2907 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002919622 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]`
11	`HGC00422 gi\|163631722\|dbj\|BABG01004545.1\|2.0 TMP00397;`	`274`	`CSGID`	`106-218`	`-4.870`	`9`	`IDP95010 Set165a_018 [Vibrio cholerae O1 biovar El Tor]`
12	`HGC00429 gi\|162734516\|dbj\|BAAZ01029480.1\|1.0 TMP00411;`	`255`	`CSGID`	`5-134`	`-6.410`	`9`	`IDP05737 hypothetical protein CD1990 [Clostridium difficile 630] CD1990 [Peptoclostridium difficile 630]`
13	`HGC00485 gi\|163636056\|dbj\|BABG01000217.1\|3.0 TMP00523;`	`127`	`CSGID`	`18-96`	`-6.340`	`22`	`IDP06052 hypothetical protein jhp0557 [Helicobacter pylori J99] NP_223275 [Helicobacter pylori J99]`
14	`HGC00509 gi\|162658693\|dbj\|BAAX01000912.1\|3.0 TMP00561;`	`136`	`CSGID`	`8-87`	`-6.370`	`17`	`IDP05509 gene: spoIIIJ2; stage III sporulation protein J [Bacillus anthracis str. Ames] BA_5736 [Bacillus anthracis str. Ames]`
15	`HGC00518 gi\|162728471\|dbj\|BAAY01000490.1\|2.0 TMP00574;`	`92`	`CSGID`	`55-86`	`-5.050`	`18`	`IDP04078 gene: YPCD1.09c; hypothetical protein YPCD1.09c [Yersinia pestis CO92] YPCD1.09c [Yersinia pestis CO92]`
16	`HGC00522 gi\|163636101\|dbj\|BABG01000172.1\|3.0 TMP00580;`	`203`	`CSGID`	`15-84`	`-9.750`	`12`	IDP95122 streptomycin 3``-adenylyltransferase [Staphylococcus aureus subsp. aureus CIG1242] EHT28025 [Staphylococcus aureus subsp. aureus CIG1242]
17	`HGC00552 gi\|162599220\|dbj\|BAAV01006262.1\|2.0 TMP00636;`	`115`	`CSGID`	`1-56`	`-9.600`	`21`	`IDP05521 putative cell surface protein [Clostridium difficile 630] CD1858 [Peptoclostridium difficile 630]`
18	`HGC00573 gi\|163306732\|dbj\|BABD01003960.1\|2.0 TMP00669;`	`125`	`CSGID`	`2-124`	`-18.800`	`10`	`IDP90419 gene: euo; CHLPS Euo Protein [Chlamydia trachomatis D/UW-3/CX] CT_446 [Chlamydia trachomatis D/UW-3/CX]`
19	`HGC00579 gi\|163284429\|dbj\|BABD01026259.1\|2.0 TMP00679;`	`172`	`CSGID`	`1-145`	`-11.400`	`6`	`IDP02013 gene: pgtE; outer membrane protease [Salmonella typhimurium LT2] STM2395 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
20	`HGC00593 gi\|162858151\|dbj\|BABB01011554.1\|1.0 TMP00709;`	`112`	`CSGID`	`3-46`	`-5.510`	`8`	`IDP06373 gene: ORF17.5; ORF17.5 [Human herpesvirus 8] YP_001129370 [Human herpesvirus 8]`