FFAS03 list of results S.typhimurium / CSGID

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4725 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16763391|ref|NP_459006.1| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 21 CSGID 2-21 -3.590 25 IDP91738 Q5YB85_STRSG [Streptococcus sp. `group G`]
2 gi|16763392|ref|NP_459007.1| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 820 CSGID 1-817 -212.000 29 IDP00585 gene: metL; bifunctional aspartate kinase II/homoserine dehydrogenase II YPO0116 [Yersinia pestis CO92]
3 gi|16763393|ref|NP_459008.1| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 309 CSGID 2-308 -85.400 24 IDP90702 gene: thrB; homoserine kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0134 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
4 gi|16763394|ref|NP_459009.1| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 428 CSGID 1-428 -126.000 100 IDP00901 gene: thrC; threonine synthase STM0004 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
5 gi|16763395|ref|NP_459010.1| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 257 CSGID 1-257 -109.000 67 IDP91427 hypothetical protein VV1_0535 [Vibrio vulnificus CMCP6] VV1_0535 [Vibrio vulnificus CMCP6]
6 gi|16763396|ref|NP_459011.1| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 476 CSGID 1-476 -134.000 51 IDP91426 Na+/alanine symporter [Vibrio vulnificus CMCP6] VV1_0536 [Vibrio vulnificus CMCP6]
7 gi|16763397|ref|NP_459012.1| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 317 CSGID 1-317 -98.500 48 IDP02095 gene: talA; transaldolase B [Francisella tularensis subsp. tularensis SCHU S4] FTT1093c [Francisella tularensis subsp. tularensis SCHU S4]
8 gi|16763398|ref|NP_459013.1| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 196 CSGID 1-188 -67.700 50 IDP06143 gene: mogA; molybdenum cofactor biosynthesis protein MogA [Helicobacter pylori J99] NP_223453 [Helicobacter pylori J99]
9 gi|16763399|ref|NP_459014.1| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 188 CSGID 3-188 -95.100 64 IDP91444 hypothetical protein VV1_0416 [Vibrio vulnificus CMCP6] VV1_0416 [Vibrio vulnificus CMCP6]
10 gi|16763400|ref|NP_459015.1| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 237 CSGID 5-136 -5.950 15 IDP04265 putative cell division protein DivIVA [Clostridium perfringens ATCC 13124] CPF_2105 [Clostridium perfringens ATCC 13124]
11 gi|16763401|ref|NP_459016.1|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 111 CSGID 30-111 -6.650 13 IDP91909 cell wall surface anchor family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002785 [Streptococcus pneumoniae str. Canada MDR_19A]
12 gi|16763402|ref|NP_459017.1| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 638 CSGID 1-638 -172.000 73 IDP02646 gene: dnaK; chaperone protein dnak [Coxiella burnetii RSA 493] CBU_1290 [Coxiella burnetii RSA 493]
13 gi|16763403|ref|NP_459018.1| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 379 CSGID 1-379 -130.000 87 IDP00478 gene: dnaJ; chaperone protein DnaJ YPO0469 [Yersinia pestis CO92]
14 gi|16763404|ref|NP_459019.1| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 315 CSGID 10-313 -42.700 13 IDP00586 gene: metR; lysR-family transcriptional regulatory protein YPO3789 [Yersinia pestis CO92]
15 gi|16763405|ref|NP_459020.1| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 114 CSGID 77-103 -6.130 25 IDP02042 gene: asd; aspartate-semialdehyde dehydrogenase [Coxiella burnetii RSA 493] CBU_0875 [Coxiella burnetii RSA 493]
16 gi|16763406|ref|NP_459021.1| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 177 CSGID 65-136 -10.100 13 IDP05636 putative peptidoglycan-binding/hydrolysing protein [Clostridium difficile 630] CD2388 [Peptoclostridium difficile 630]
17 gi|16763407|ref|NP_459022.1| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 147 CSGID 1-147 -64.100 100 IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
18 gi|16763408|ref|NP_459023.1| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 699 CSGID 2-490 -86.600 20 IDP05198 putative bifunctional protein: peroxiredoxin/chitinase [Clostridium difficile 630] CD1433 [Peptoclostridium difficile 630]
36-697 -108.000 18 IDP05654 hypothetical protein lmo0105 [Listeria monocytogenes EGD-e] lmo0105 [Listeria monocytogenes EGD-e]
19 gi|16763409|ref|NP_459024.1| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 998 CSGID 1-566 -12.300 6 IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
1-770 -9.520 8 IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]
20 gi|16763410|ref|NP_459025.1| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 234 CSGID 34-228 -47.500 17 IDP91810 gene: crp; DNA-binding transcriptional dual regulator [Escherichia coli str. K-12 substr. MG1655] b3357 [Escherichia coli str. K-12 substr. MG1655]

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|16763391\|ref\|NP_459006.1\| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`21`	`CSGID`	`2-21`	`-3.590`	`25`	IDP91738 Q5YB85_STRSG [Streptococcus sp. `group G`]
2	`gi\|16763392\|ref\|NP_459007.1\| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`820`	`CSGID`	`1-817`	`-212.000`	`29`	`IDP00585 gene: metL; bifunctional aspartate kinase II/homoserine dehydrogenase II YPO0116 [Yersinia pestis CO92]`
3	`gi\|16763393\|ref\|NP_459008.1\| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`309`	`CSGID`	`2-308`	`-85.400`	`24`	`IDP90702 gene: thrB; homoserine kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0134 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]`
4	`gi\|16763394\|ref\|NP_459009.1\| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`428`	`CSGID`	`1-428`	`-126.000`	`100`	`IDP00901 gene: thrC; threonine synthase STM0004 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
5	`gi\|16763395\|ref\|NP_459010.1\| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`257`	`CSGID`	`1-257`	`-109.000`	`67`	`IDP91427 hypothetical protein VV1_0535 [Vibrio vulnificus CMCP6] VV1_0535 [Vibrio vulnificus CMCP6]`
6	`gi\|16763396\|ref\|NP_459011.1\| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`476`	`CSGID`	`1-476`	`-134.000`	`51`	`IDP91426 Na+/alanine symporter [Vibrio vulnificus CMCP6] VV1_0536 [Vibrio vulnificus CMCP6]`
7	`gi\|16763397\|ref\|NP_459012.1\| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`317`	`CSGID`	`1-317`	`-98.500`	`48`	`IDP02095 gene: talA; transaldolase B [Francisella tularensis subsp. tularensis SCHU S4] FTT1093c [Francisella tularensis subsp. tularensis SCHU S4]`
8	`gi\|16763398\|ref\|NP_459013.1\| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`196`	`CSGID`	`1-188`	`-67.700`	`50`	`IDP06143 gene: mogA; molybdenum cofactor biosynthesis protein MogA [Helicobacter pylori J99] NP_223453 [Helicobacter pylori J99]`
9	`gi\|16763399\|ref\|NP_459014.1\| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`188`	`CSGID`	`3-188`	`-95.100`	`64`	`IDP91444 hypothetical protein VV1_0416 [Vibrio vulnificus CMCP6] VV1_0416 [Vibrio vulnificus CMCP6]`
10	`gi\|16763400\|ref\|NP_459015.1\| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`237`	`CSGID`	`5-136`	`-5.950`	`15`	`IDP04265 putative cell division protein DivIVA [Clostridium perfringens ATCC 13124] CPF_2105 [Clostridium perfringens ATCC 13124]`
11	`gi\|16763401\|ref\|NP_459016.1\|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`111`	`CSGID`	`30-111`	`-6.650`	`13`	`IDP91909 cell wall surface anchor family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002785 [Streptococcus pneumoniae str. Canada MDR_19A]`
12	`gi\|16763402\|ref\|NP_459017.1\| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`638`	`CSGID`	`1-638`	`-172.000`	`73`	`IDP02646 gene: dnaK; chaperone protein dnak [Coxiella burnetii RSA 493] CBU_1290 [Coxiella burnetii RSA 493]`
13	`gi\|16763403\|ref\|NP_459018.1\| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`379`	`CSGID`	`1-379`	`-130.000`	`87`	`IDP00478 gene: dnaJ; chaperone protein DnaJ YPO0469 [Yersinia pestis CO92]`
14	`gi\|16763404\|ref\|NP_459019.1\| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`315`	`CSGID`	`10-313`	`-42.700`	`13`	`IDP00586 gene: metR; lysR-family transcriptional regulatory protein YPO3789 [Yersinia pestis CO92]`
15	`gi\|16763405\|ref\|NP_459020.1\| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`114`	`CSGID`	`77-103`	`-6.130`	`25`	`IDP02042 gene: asd; aspartate-semialdehyde dehydrogenase [Coxiella burnetii RSA 493] CBU_0875 [Coxiella burnetii RSA 493]`
16	`gi\|16763406\|ref\|NP_459021.1\| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`177`	`CSGID`	`65-136`	`-10.100`	`13`	`IDP05636 putative peptidoglycan-binding/hydrolysing protein [Clostridium difficile 630] CD2388 [Peptoclostridium difficile 630]`
17	`gi\|16763407\|ref\|NP_459022.1\| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`147`	`CSGID`	`1-147`	`-64.100`	`100`	`IDP01845 hypothetical protein STM0017 [Salmonella typhimurium LT2] STM0017 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`
18	`gi\|16763408\|ref\|NP_459023.1\| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`699`	`CSGID`	`2-490`	`-86.600`	`20`	`IDP05198 putative bifunctional protein: peroxiredoxin/chitinase [Clostridium difficile 630] CD1433 [Peptoclostridium difficile 630]`
				`36-697`	`-108.000`	`18`	`IDP05654 hypothetical protein lmo0105 [Listeria monocytogenes EGD-e] lmo0105 [Listeria monocytogenes EGD-e]`
19	`gi\|16763409\|ref\|NP_459024.1\| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`998`	`CSGID`	`1-566`	`-12.300`	`6`	`IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]`
				`1-770`	`-9.520`	`8`	`IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]`
20	`gi\|16763410\|ref\|NP_459025.1\| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`234`	`CSGID`	`34-228`	`-47.500`	`17`	`IDP91810 gene: crp; DNA-binding transcriptional dual regulator [Escherichia coli str. K-12 substr. MG1655] b3357 [Escherichia coli str. K-12 substr. MG1655]`