FFAS03 list of results S.typhimurium / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 4724 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|16763391|ref|NP_459006.1| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 21 HGM_OVER 1-20 -0.897 15 PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)
2 gi|16763392|ref|NP_459007.1| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 820 HGM_OVER 187-444 -2.240 10 PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]
3 gi|16763393|ref|NP_459008.1| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 309 HGM_OVER 89-245 -3.410 7 PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;
4 gi|16763394|ref|NP_459009.1| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 428 HGM_OVER 103-286 -2.300 9 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;
5 gi|16763395|ref|NP_459010.1| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 257 HGM_OVER 32-256 -3.730 11 PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;
6 gi|16763396|ref|NP_459011.1| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 476 HGM_OVER 260-440 -3.610 11 HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;
7 gi|16763397|ref|NP_459012.1| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 317 HGM_OVER 1-162 -3.230 11 PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
8 gi|16763398|ref|NP_459013.1| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 196 HGM_OVER 46-135 -3.520 12 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;
9 gi|16763399|ref|NP_459014.1| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 188 HGM_OVER 12-59 -5.020 17 PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
10 gi|16763400|ref|NP_459015.1| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 237 HGM_OVER 1-141 -5.560 9 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
11 gi|16763401|ref|NP_459016.1|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 111 HGM_OVER 4-111 -5.580 11 HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;
12 gi|16763402|ref|NP_459017.1| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 638 HGM_OVER 115-495 -7.850 12 PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)
13 gi|16763403|ref|NP_459018.1| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 379 HGM_OVER 147-225 -5.010 15 HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
14 gi|16763404|ref|NP_459019.1| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 315 HGM_OVER 16-107 -4.080 15 PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis]
15 gi|16763405|ref|NP_459020.1| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 114 HGM_OVER 29-88 -5.340 10 PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;
16 gi|16763406|ref|NP_459021.1| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 177 HGM_OVER 77-173 -5.870 17 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;
17 gi|16763407|ref|NP_459022.1| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 147 HGM_OVER 1-107 -4.820 11 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
18 gi|16763408|ref|NP_459023.1| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 699 HGM_OVER 176-304 -4.930 17 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
19 gi|16763409|ref|NP_459024.1| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 998 HGM_OVER 800-992 -4.220 7 PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF
20 gi|16763410|ref|NP_459025.1| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] 234 HGM_OVER 159-222 -6.000 17 PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`gi\|16763391\|ref\|NP_459006.1\| thr operon leader peptide (STM0001) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`21`	`HGM_OVER`	`1-20`	`-0.897`	`15`	`PB045072 _Gut.Meta.Jp.0111663_ gi\|163310555\|dbj\|BABD01000145.1\|\|3 (+ 1662:2028~0 complete)`
2	`gi\|16763392\|ref\|NP_459007.1\| bifunctional aspartokinase I/homoserine dehydrogenase I (STM0002) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`820`	`HGM_OVER`	`187-444`	`-2.240`	`10`	`PB083081 gi\|160890648\|ref\|ZP_02071651.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi\|156859647\|gb\|EDO53078.1\| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]`
3	`gi\|16763393\|ref\|NP_459008.1\| homoserine kinase (STM0003) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`309`	`HGM_OVER`	`89-245`	`-3.410`	`7`	`PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;`
4	`gi\|16763394\|ref\|NP_459009.1\| threonine synthase (STM0004) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`428`	`HGM_OVER`	`103-286`	`-2.300`	`9`	`PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;`
5	`gi\|16763395\|ref\|NP_459010.1\| hypothetical protein (STM0005) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`257`	`HGM_OVER`	`32-256`	`-3.730`	`11`	`PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;`
6	`gi\|16763396\|ref\|NP_459011.1\| alanine/glycine transport protein (STM0006) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`476`	`HGM_OVER`	`260-440`	`-3.610`	`11`	`HGC00762 gi\|162641591\|dbj\|BAAX01018014.1\|1.0 TMP00997;`
7	`gi\|16763397\|ref\|NP_459012.1\| transaldolase B (STM0007) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`317`	`HGM_OVER`	`1-162`	`-3.230`	`11`	`PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;`
8	`gi\|16763398\|ref\|NP_459013.1\| molybdenum cofactor biosynthesis protein MogA (STM0008) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`196`	`HGM_OVER`	`46-135`	`-3.520`	`12`	`HGC00164 gi\|163636082\|dbj\|BABG01000191.1\|4.0 TMP00833;`
9	`gi\|16763399\|ref\|NP_459014.1\| hypothetical protein (STM0009) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`188`	`HGM_OVER`	`12-59`	`-5.020`	`17`	`PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;`
10	`gi\|16763400\|ref\|NP_459015.1\| hypothetical protein (STM0010) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`237`	`HGM_OVER`	`1-141`	`-5.560`	`9`	`PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;`
11	`gi\|16763401\|ref\|NP_459016.1\|(removed signalp:1-23) hypothetical protein (STM0011) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`111`	`HGM_OVER`	`4-111`	`-5.580`	`11`	`HGC00947 gi\|162844524\|dbj\|BABA01000185.1\|4.0 TMP01280;`
12	`gi\|16763402\|ref\|NP_459017.1\| molecular chaperone DnaK (STM0012) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`638`	`HGM_OVER`	`115-495`	`-7.850`	`12`	`PB162065 _Gut.Meta.Jp.0089312_ gi\|162832207\|dbj\|BABA01012502.1\|\|1 (- 0:1326~0 complete)`
13	`gi\|16763403\|ref\|NP_459018.1\| chaperone protein DnaJ (STM0013) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`379`	`HGM_OVER`	`147-225`	`-5.010`	`15`	`HGC00991 gi\|163600283\|dbj\|BABF01000984.1\|3.0 TMP01348;`
14	`gi\|16763404\|ref\|NP_459019.1\| transcriptional regulator (STM0014) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`315`	`HGM_OVER`	`16-107`	`-4.080`	`15`	`PB003564 gi\|46242789\|gb\|AAS83494.1\| TraD [Bacteroides fragilis]`
15	`gi\|16763405\|ref\|NP_459020.1\| bacteriophage protein (STM0015) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`114`	`HGM_OVER`	`29-88`	`-5.340`	`10`	`PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;`
16	`gi\|16763406\|ref\|NP_459021.1\| hypothetical protein (STM0016) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`177`	`HGM_OVER`	`77-173`	`-5.870`	`17`	`HGC00485 gi\|163636056\|dbj\|BABG01000217.1\|3.0 TMP00523;`
17	`gi\|16763407\|ref\|NP_459022.1\| hypothetical protein (STM0017) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`147`	`HGM_OVER`	`1-107`	`-4.820`	`11`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`
18	`gi\|16763408\|ref\|NP_459023.1\| exochitinase (STM0018) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`699`	`HGM_OVER`	`176-304`	`-4.930`	`17`	`PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;`
19	`gi\|16763409\|ref\|NP_459024.1\| hydroxymethyltransferase (STM0019) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`998`	`HGM_OVER`	`800-992`	`-4.220`	`7`	`PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF`
20	`gi\|16763410\|ref\|NP_459025.1\| cytoplasmic protein (STM0020) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]`	`234`	`HGM_OVER`	`159-222`	`-6.000`	`17`	`PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;`