FFAS03 list of results C.acetobutylicum / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4052 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|15896427|ref|NP_349776.1|(removed signalp:1-33) oligopeptide ABC transporter, periplasmic binding component (CA_C3179) [Clostridium acetobutylicum ATCC 824] 534 HGM_OVER 346-491 -4.000 15 PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;
22 gi|15895557|ref|NP_348906.1| biotin carboxyl carrier protein (CA_C2289) [Clostridium acetobutylicum ATCC 824] 129 HGM_OVER 57-117 -2.840 9 PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
23 gi|15894699|ref|NP_348048.1| hypothetical protein (CA_C1420) [Clostridium acetobutylicum ATCC 824] 468 HGM_OVER 295-431 -5.330 13 PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;
24 gi|15004730|ref|NP_149190.1| hypothetical protein (CA_P0026) [Clostridium acetobutylicum ATCC 824] 192 HGM_OVER 19-118 -4.990 16 PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
25 gi|15004854|ref|NP_149314.1| integrin-like repeat-containing lysozyme (CA_P0151) [Clostridium acetobutylicum ATCC 824] 752 HGM_OVER 51-519 -4.390 8 PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;
26 gi|15004805|ref|NP_149265.1| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824] 500 HGM_OVER 135-339 -4.710 9 PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
27 gi|15004805|ref|NP_149265.1| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824] 500 HGM_OVER 334-475 -6.680 9 PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
28 gi|15004805|ref|NP_149265.1| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824] 500 HGM_OVER 21-169 -5.630 10 PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
29 gi|15004805|ref|NP_149265.1| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824] 308 HGM_OVER 122-281 -7.100 10 PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;
30 gi|15896509|ref|NP_349858.1| hypothetical protein (CA_C3264) [Clostridium acetobutylicum ATCC 824] 133 HGM_OVER 76-133 -4.520 16 PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;
31 gi|15896412|ref|NP_349761.1| lysine-specific permease (CA_C3164) [Clostridium acetobutylicum ATCC 824] 489 HGM_OVER 307-419 -4.210 9 HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;
32 gi|15895899|ref|NP_349248.1| trigger factor (CA_C2641) [Clostridium acetobutylicum ATCC 824] 431 HGM_OVER 276-323 -4.700 18 HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;
33 gi|15895101|ref|NP_348450.1| homoserine O-succinyltransferase (CA_C1825) [Clostridium acetobutylicum ATCC 824] 301 HGM_OVER 101-179 -3.850 16 PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]
34 gi|15894638|ref|NP_347987.1|(removed signalp:1-33) xylanase/chitin deacetylase (CA_C1359) [Clostridium acetobutylicum ATCC 824] 244 HGM_OVER 42-141 -3.560 12 PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
35 gi|15004813|ref|NP_149273.1| NH2-acetyltransferase (CA_P0110) [Clostridium acetobutylicum ATCC 824] 137 HGM_OVER 49-137 -5.700 11 PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
36 gi|15893349|ref|NP_346698.1| hypothetical protein (CA_C0051) [Clostridium acetobutylicum ATCC 824] 66 HGM_OVER 13-63 -2.700 13 PB014120 _Gut.Meta.Jp.0147711_ gi|163636126|dbj|BABG01000147.1||5 (+ 2345:3428~0 complete)
37 gi|15895869|ref|NP_349218.1| hypothetical protein (CA_C2611) [Clostridium acetobutylicum ATCC 824] 207 HGM_OVER 90-207 -4.240 8 PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;
38 gi|15894130|ref|NP_347479.1|(removed signalp:1-30) ribonuclease precursor (barnase), secreted (CA_C0843) [Clostridium acetobutylicum ATCC 824] 126 HGM_OVER 35-126 -4.650 20 HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;
39 gi|15895875|ref|NP_349224.1|(removed signalp:1-34) methyl-accepting chemotaxis protein (CA_C2617) [Clostridium acetobutylicum ATCC 824] 630 HGM_OVER 330-487 -4.520 14 PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;
40 gi|15896733|ref|NP_350082.1| transcriptional regulator (CA_C3496) [Clostridium acetobutylicum ATCC 824] 106 HGM_OVER 18-90 -6.520 15 PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`gi\|15896427\|ref\|NP_349776.1\|(removed signalp:1-33) oligopeptide ABC transporter, periplasmic binding component (CA_C3179) [Clostridium acetobutylicum ATCC 824]`	`534`	`HGM_OVER`	`346-491`	`-4.000`	`15`	`PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;`
22	`gi\|15895557\|ref\|NP_348906.1\| biotin carboxyl carrier protein (CA_C2289) [Clostridium acetobutylicum ATCC 824]`	`129`	`HGM_OVER`	`57-117`	`-2.840`	`9`	`PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;`
23	`gi\|15894699\|ref\|NP_348048.1\| hypothetical protein (CA_C1420) [Clostridium acetobutylicum ATCC 824]`	`468`	`HGM_OVER`	`295-431`	`-5.330`	`13`	`PB004996 Q5NNS6_ZYMMO/1-150 PB004996; Pfam-B_4996;`
24	`gi\|15004730\|ref\|NP_149190.1\| hypothetical protein (CA_P0026) [Clostridium acetobutylicum ATCC 824]`	`192`	`HGM_OVER`	`19-118`	`-4.990`	`16`	`PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]`
25	`gi\|15004854\|ref\|NP_149314.1\| integrin-like repeat-containing lysozyme (CA_P0151) [Clostridium acetobutylicum ATCC 824]`	`752`	`HGM_OVER`	`51-519`	`-4.390`	`8`	`PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;`
26	`gi\|15004805\|ref\|NP_149265.1\| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824]`	`500`	`HGM_OVER`	`135-339`	`-4.710`	`9`	`PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;`
27	`gi\|15004805\|ref\|NP_149265.1\| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824]`	`500`	`HGM_OVER`	`334-475`	`-6.680`	`9`	`PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;`
28	`gi\|15004805\|ref\|NP_149265.1\| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824]`	`500`	`HGM_OVER`	`21-169`	`-5.630`	`10`	`PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;`
29	`gi\|15004805\|ref\|NP_149265.1\| hypothetical protein (CA_P0102) [Clostridium acetobutylicum ATCC 824]`	`308`	`HGM_OVER`	`122-281`	`-7.100`	`10`	`PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;`
30	`gi\|15896509\|ref\|NP_349858.1\| hypothetical protein (CA_C3264) [Clostridium acetobutylicum ATCC 824]`	`133`	`HGM_OVER`	`76-133`	`-4.520`	`16`	`PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;`
31	`gi\|15896412\|ref\|NP_349761.1\| lysine-specific permease (CA_C3164) [Clostridium acetobutylicum ATCC 824]`	`489`	`HGM_OVER`	`307-419`	`-4.210`	`9`	`HGC00965 gi\|163282470\|dbj\|BABD01028218.1\|2.0 TMP01310;`
32	`gi\|15895899\|ref\|NP_349248.1\| trigger factor (CA_C2641) [Clostridium acetobutylicum ATCC 824]`	`431`	`HGM_OVER`	`276-323`	`-4.700`	`18`	`HGC00915 gi\|162810474\|dbj\|BABA01034235.1\|2.0 TMP01234;`
33	`gi\|15895101\|ref\|NP_348450.1\| homoserine O-succinyltransferase (CA_C1825) [Clostridium acetobutylicum ATCC 824]`	`301`	`HGM_OVER`	`101-179`	`-3.850`	`16`	`PB001572 gi\|163816107\|ref\|ZP_02207475.1\| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi\|158448527\|gb\|EDP25522.1\| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]`
34	`gi\|15894638\|ref\|NP_347987.1\|(removed signalp:1-33) xylanase/chitin deacetylase (CA_C1359) [Clostridium acetobutylicum ATCC 824]`	`244`	`HGM_OVER`	`42-141`	`-3.560`	`12`	`PB031792 gi\|154174791\|ref\|YP_001409041.1\| flavodoxin family protein [Campylobacter curvus 525.92]gi\|112804021\|gb\|EAU01365.1\| flavodoxin family protein [Campylobacter curvus 525.92]`
35	`gi\|15004813\|ref\|NP_149273.1\| NH2-acetyltransferase (CA_P0110) [Clostridium acetobutylicum ATCC 824]`	`137`	`HGM_OVER`	`49-137`	`-5.700`	`11`	`PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;`
36	`gi\|15893349\|ref\|NP_346698.1\| hypothetical protein (CA_C0051) [Clostridium acetobutylicum ATCC 824]`	`66`	`HGM_OVER`	`13-63`	`-2.700`	`13`	`PB014120 _Gut.Meta.Jp.0147711_ gi\|163636126\|dbj\|BABG01000147.1\|\|5 (+ 2345:3428~0 complete)`
37	`gi\|15895869\|ref\|NP_349218.1\| hypothetical protein (CA_C2611) [Clostridium acetobutylicum ATCC 824]`	`207`	`HGM_OVER`	`90-207`	`-4.240`	`8`	`PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;`
38	`gi\|15894130\|ref\|NP_347479.1\|(removed signalp:1-30) ribonuclease precursor (barnase), secreted (CA_C0843) [Clostridium acetobutylicum ATCC 824]`	`126`	`HGM_OVER`	`35-126`	`-4.650`	`20`	`HGC01024 gi\|162869036\|dbj\|BABB01000971.1\|4.0 TMP01399;`
39	`gi\|15895875\|ref\|NP_349224.1\|(removed signalp:1-34) methyl-accepting chemotaxis protein (CA_C2617) [Clostridium acetobutylicum ATCC 824]`	`630`	`HGM_OVER`	`330-487`	`-4.520`	`14`	`PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;`
40	`gi\|15896733\|ref\|NP_350082.1\| transcriptional regulator (CA_C3496) [Clostridium acetobutylicum ATCC 824]`	`106`	`HGM_OVER`	`18-90`	`-6.520`	`15`	`PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;`