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Results: 21-40 of 8069< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|6319264|ref|NP_009347.1| Acetyl-coA synthetase isoform which, along with Acs2p, is the nuclear source of acetyl-coA for histone acetlyation; expressed during growth on nonfermentable carbon sources and under aerobic conditions; Acs1p (YAL054C) [Saccharomyces cerevisiae] 713 CSGID 54-712 -165.000 46  IDP02156 gene: acs; acetyl-CoA synthetase [Yersinia pestis CO92] YPO0253 [Yersinia pestis CO92]
22 gi|6319265|ref|NP_009348.1|(removed signalp:1-22) Putative FAD transporter; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; Flc2p (YAL053W) [Saccharomyces cerevisiae] 761 CSGID 20-155 -7.830 12  IDP00930 putative hydrogenase protein STM0612 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
23 gi|50593114|ref|NP_009349.2| Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis; Oaf1p (YAL051W) [Saccharomyces cerevisiae] 500 CSGID 2-448 -8.420 IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
24 gi|50593114|ref|NP_009349.2| Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis; Oaf1p (YAL051W) [Saccharomyces cerevisiae] 500 CSGID 143-283 -5.860 IDP05689 putative cellsurface protein [Listeria monocytogenes EGD-e] lmo1654 [Listeria monocytogenes EGD-e]
25 gi|50593114|ref|NP_009349.2| Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis; Oaf1p (YAL051W) [Saccharomyces cerevisiae] 500 CSGID 4-37 -4.900 IDP05492 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_3540 [Bacillus anthracis str. Ames]
26 gi|50593114|ref|NP_009349.2| Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes involved in beta-oxidation of fatty acids and peroxisome organization and biogenesis; Oaf1p (YAL051W) [Saccharomyces cerevisiae] 297 CSGID 17-294 -5.940 13  IDP05565 gene: spl; peptidoglycan lytic protein P45 [Listeria monocytogenes EGD-e] lmo2505 [Listeria monocytogenes EGD-e]
27 gi|6319267|ref|NP_009350.1| Cytoplasmic protein of unknown function, potential Hsp82p interactor; null mutant displays decreased frequency of mitochondrial genome loss (petite formation); Aim2p (YAL049C) [Saccharomyces cerevisiae] 246 CSGID 30-246 -23.500 13  IDP01809 carboxylesterase/phospholipase family protein [Francisella tularensis subsp. tularensis SCHU S4] FTT0258 [Francisella tularensis subsp. tularensis SCHU S4]
28 gi|6319268|ref|NP_009351.1| Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase which regulates mitochondrial morphology; cells lacking Gem1p contain collapsed, globular, or grape-like mitochondria; not required for pheromone-induced cell death; Gem1p (YAL048C) [Saccharomyces cerevisiae] 662 CSGID 4-188 -37.900 15  IDP92608 Rab 11b, putative [Toxoplasma gondii ME49] TGME49_120480 [Toxoplasma gondii ME49]
7-623 -15.500 14  IDP04530 gene: engA; GTP-binding protein EngA [Salmonella typhimurium LT2] STM2519_1_490 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
29 gi|6319269|ref|NP_009352.1| Component of the cytoplasmic Tub4p (gamma-tubulin) complex, binds spindle pole bodies and links them to microtubules; has roles in astral microtubule formation and stabilization; Spc72p (YAL047C) [Saccharomyces cerevisiae] 622 CSGID 1-614 -13.400 IDP91721 gene: MMRN2; multimerin-2 precursor [Homo sapiens] NP_079032 [Homo sapiens]
30 gi|6319270|ref|NP_009353.1| Putative protein of unknown function; null mutant displays increased frequency of mitochondrial genome loss (petite formation); Aim1p (YAL046C) [Saccharomyces cerevisiae] 118 CSGID 38-118 -45.500 30  IDP01322 bolA protein VC2296 [Vibrio cholerae O1 biovar El Tor str. N16961]
31 gi|12621476|ref|NP_075206.1| Putative protein of unknown function; similar to S. pombe uvi31 which is a putative DNA repair protein; Yal044w-ap (YAL044W-A) [Saccharomyces cerevisiae] 110 CSGID 12-110 -56.100 35  IDP01322 bolA protein VC2296 [Vibrio cholerae O1 biovar El Tor str. N16961]
32 gi|37362609|ref|NP_009355.2| H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of levels of 5,10-methylene-THF in the cytoplasm; Gcv3p (YAL044C) [Saccharomyces cerevisiae] 170 CSGID 39-169 -67.200 38  IDP01980 gene: gcvH; glycine cleavage system protein H [Salmonella typhimurium LT2] STM3054 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
33 gi|6319273|ref|NP_009356.1| Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF, required for the cleavage and polyadenylation of mRNA and snoRNA 3' ends; involved in pre-tRNA processing; binds to the phosphorylated CTD of RNAPII; Pta1p (YAL043C) [Saccharomyces cerevisiae] 785 CSGID 301-666 -9.180 10  IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
34 gi|6319274|ref|NP_009358.1| Protein localized to COPII-coated vesicles, forms a complex with Erv41p; involved in the membrane fusion stage of transport; Erv46p (YAL042W) [Saccharomyces cerevisiae] 415 CSGID 1-375 -6.070 IDP91038 hypothetical protein SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3] SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3]
35 gi|6319276|ref|NP_009359.1| Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p; required for polarity establishment and maintenance, and mutants have morphological defects in bud formation and shmooing; Cdc24p (YAL041W) [Saccharomyces cerevisiae] 854 CSGID 280-779 -8.340 IDP91541 3`,5`--cyclic-nucleotide phosphodiesterase, putative [Toxoplasma gondii ME49] TGME49_118680 [Toxoplasma gondii ME49]
36 gi|6319277|ref|NP_009360.1| G1 cyclin involved in cell cycle progression; activates Cdc28p kinase to promote the G1 to S phase transition; plays a role in regulating transcription of the other G1 cyclins, CLN1 and CLN2; regulated by phosphorylation and proteolysis; Cln3p (YAL040C) [Saccharomyces cerevisiae] 580 CSGID 71-205 -7.250 19  IDP95313 VgrG protein [Vibrio cholerae O1 biovar El Tor str. N16961] NP_232524 [Vibrio cholerae O1 biovar El Tor str. N16961]
37 gi|6319278|ref|NP_009361.1| Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c (Cyc1p or Cyc7p) in the mitochondrial intermembrane space; human ortholog may have a role in microphthalmia with linear skin defects (MLS); Cyc3p (YAL039C) [Saccharomyces cerevisiae] 269 CSGID 4-267 -6.790 18  CPX_91722_91684 Complex of ROA1_HUMAN with Q19QW0_CVHSA [Undefined organism]
38 gi|6319279|ref|NP_009362.1| Pyruvate kinase, functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration; Cdc19p (YAL038W) [Saccharomyces cerevisiae] 500 CSGID 18-500 -123.000 42  IDP91824 gene: pykF; pyruvate kinase I [Escherichia coli str. K-12 substr. MG1655] b1676 [Escherichia coli str. K-12 substr. MG1655]
39 gi|33438756|ref|NP_878040.1| Putative protein of unknown function; Yal037c-ap (YAL037C-A) [Saccharomyces cerevisiae] 30 CSGID 1-18 -3.500 16  IDP00531 gene: ccmD; putative heme exporter protein D YPO2737 [Yersinia pestis CO92]
40 gi|6319280|ref|NP_009363.1| Putative protein of unknown function; (YAL037W) [Saccharomyces cerevisiae] 267 CSGID 17-212 -13.600 IDP90295 dual-specificity phosphatase laforin, putative [Toxoplasma gondii ME49] TGME49_005290 [Toxoplasma gondii ME49]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02.