FFAS03 list of results C.trachomatis / HGM

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 968 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 500 HGM_OVER 168-278 -3.420 10 PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;
22 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 500 HGM_OVER 37-240 -3.250 7 PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;
23 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] 286 HGM_OVER 7-285 -3.860 10 PB001232 gi|126647001|ref|ZP_01719511.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi|126577049|gb|EAZ81297.1| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]
24 gi|15604738|ref|NP_219522.1| signal peptidase I (CT020) [Chlamydia trachomatis D/UW-3/CX] 628 HGM_OVER 41-201 -5.640 6 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
25 gi|15604739|ref|NP_219523.1|(removed signalp:1-31) hypothetical protein (CT021) [Chlamydia trachomatis D/UW-3/CX] 216 HGM_OVER 13-162 -4.990 6 PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;
26 gi|15604740|ref|NP_219524.1| 50S ribosomal protein L31 type B (CT022) [Chlamydia trachomatis D/UW-3/CX] 108 HGM_OVER 38-92 -4.320 13 PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;
27 gi|15604741|ref|NP_219525.1| peptide chain release factor 1 (CT023) [Chlamydia trachomatis D/UW-3/CX] 359 HGM_OVER 102-328 -3.640 8 PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;
28 gi|15604742|ref|NP_219526.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (CT024) [Chlamydia trachomatis D/UW-3/CX] 290 HGM_OVER 89-270 -3.370 10 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
29 gi|15604743|ref|NP_219527.1| signal recognition particle, subunit FFH/SRP54 (CT025) [Chlamydia trachomatis D/UW-3/CX] 448 HGM_OVER 268-441 -3.010 8 PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]
30 gi|15604744|ref|NP_219528.1| 30S ribosomal protein S16 (CT026) [Chlamydia trachomatis D/UW-3/CX] 116 HGM_OVER 32-116 -4.810 10 PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]
31 gi|15604745|ref|NP_219529.1| fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein (CT027) [Chlamydia trachomatis D/UW-3/CX] 352 HGM_OVER 80-241 -3.890 8 PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
32 gi|15604746|ref|NP_219530.1| 50S ribosomal protein L19 (CT028) [Chlamydia trachomatis D/UW-3/CX] 121 HGM_OVER 2-102 -5.720 22 HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;
33 gi|15604747|ref|NP_219531.1| ribonuclease HII (CT029) [Chlamydia trachomatis D/UW-3/CX] 217 HGM_OVER 33-135 -3.660 12 HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;
34 gi|15604748|ref|NP_219532.1| guanylate kinase (CT030) [Chlamydia trachomatis D/UW-3/CX] 205 HGM_OVER 32-205 -4.560 14 PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
35 gi|15604749|ref|NP_219533.1| hypothetical protein (CT031) [Chlamydia trachomatis D/UW-3/CX] 100 HGM_OVER 39-99 -3.030 21 PB009661 _Gut.Meta.Jp.0000785_ gi|162567239|dbj|BAAU01000237.1||2 (- 3549:4008~0 complete)
36 gi|15604750|ref|NP_219534.1| methionyl-tRNA synthetase (CT032) [Chlamydia trachomatis D/UW-3/CX] 550 HGM_OVER 126-203 -4.700 12 HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;
37 gi|15604751|ref|NP_219535.1| exodeoxyribonuclease V alpha chain (CT033) [Chlamydia trachomatis D/UW-3/CX] 746 HGM_OVER 380-742 -5.740 11 PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;
38 gi|15604752|ref|NP_219536.1| cationic amino acid transporter (CT034) [Chlamydia trachomatis D/UW-3/CX] 341 HGM_OVER 103-179 -4.870 21 PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;
39 gi|15604753|ref|NP_219537.1| biotin protein ligase (CT035) [Chlamydia trachomatis D/UW-3/CX] 257 HGM_OVER 39-94 -3.840 19 PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
40 gi|15604754|ref|NP_219538.1| hypothetical protein (CT036) [Chlamydia trachomatis D/UW-3/CX] 403 HGM_OVER 8-71 -4.150 25 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`gi\|15604737\|ref\|NP_219521.1\| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX]`	`500`	`HGM_OVER`	`168-278`	`-3.420`	`10`	`PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;`
22	`gi\|15604737\|ref\|NP_219521.1\| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX]`	`500`	`HGM_OVER`	`37-240`	`-3.250`	`7`	`PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;`
23	`gi\|15604737\|ref\|NP_219521.1\| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX]`	`286`	`HGM_OVER`	`7-285`	`-3.860`	`10`	`PB001232 gi\|126647001\|ref\|ZP_01719511.1\| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]gi\|126577049\|gb\|EAZ81297.1\| hypothetical protein ALPR1_19713 [Algoriphagus sp. PR1]`
24	`gi\|15604738\|ref\|NP_219522.1\| signal peptidase I (CT020) [Chlamydia trachomatis D/UW-3/CX]`	`628`	`HGM_OVER`	`41-201`	`-5.640`	`6`	`PB015266 gi\|154494998\|ref\|ZP_02034003.1\| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi\|154085548\|gb\|EDN84593.1\| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]`
25	`gi\|15604739\|ref\|NP_219523.1\|(removed signalp:1-31) hypothetical protein (CT021) [Chlamydia trachomatis D/UW-3/CX]`	`216`	`HGM_OVER`	`13-162`	`-4.990`	`6`	`PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;`
26	`gi\|15604740\|ref\|NP_219524.1\| 50S ribosomal protein L31 type B (CT022) [Chlamydia trachomatis D/UW-3/CX]`	`108`	`HGM_OVER`	`38-92`	`-4.320`	`13`	`PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;`
27	`gi\|15604741\|ref\|NP_219525.1\| peptide chain release factor 1 (CT023) [Chlamydia trachomatis D/UW-3/CX]`	`359`	`HGM_OVER`	`102-328`	`-3.640`	`8`	`PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;`
28	`gi\|15604742\|ref\|NP_219526.1\| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (CT024) [Chlamydia trachomatis D/UW-3/CX]`	`290`	`HGM_OVER`	`89-270`	`-3.370`	`10`	`PB033130 gi\|160880323\|ref\|YP_001559291.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi\|160428989\|gb\|ABX42552.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]`
29	`gi\|15604743\|ref\|NP_219527.1\| signal recognition particle, subunit FFH/SRP54 (CT025) [Chlamydia trachomatis D/UW-3/CX]`	`448`	`HGM_OVER`	`268-441`	`-3.010`	`8`	`PB033130 gi\|160880323\|ref\|YP_001559291.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi\|160428989\|gb\|ABX42552.1\| transglutaminase domain protein [Clostridium phytofermentans ISDg]`
30	`gi\|15604744\|ref\|NP_219528.1\| 30S ribosomal protein S16 (CT026) [Chlamydia trachomatis D/UW-3/CX]`	`116`	`HGM_OVER`	`32-116`	`-4.810`	`10`	`PB019278 gi\|154508461\|ref\|ZP_02044103.1\| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi\|153798095\|gb\|EDN80515.1\| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]`
31	`gi\|15604745\|ref\|NP_219529.1\| fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein (CT027) [Chlamydia trachomatis D/UW-3/CX]`	`352`	`HGM_OVER`	`80-241`	`-3.890`	`8`	`PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;`
32	`gi\|15604746\|ref\|NP_219530.1\| 50S ribosomal protein L19 (CT028) [Chlamydia trachomatis D/UW-3/CX]`	`121`	`HGM_OVER`	`2-102`	`-5.720`	`22`	`HGC00787 gi\|162657578\|dbj\|BAAX01002027.1\|2.0 TMP01033;`
33	`gi\|15604747\|ref\|NP_219531.1\| ribonuclease HII (CT029) [Chlamydia trachomatis D/UW-3/CX]`	`217`	`HGM_OVER`	`33-135`	`-3.660`	`12`	`HGC00711 gi\|162743779\|dbj\|BAAZ01020484.1\|1.0 TMP00907;`
34	`gi\|15604748\|ref\|NP_219532.1\| guanylate kinase (CT030) [Chlamydia trachomatis D/UW-3/CX]`	`205`	`HGM_OVER`	`32-205`	`-4.560`	`14`	`PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;`
35	`gi\|15604749\|ref\|NP_219533.1\| hypothetical protein (CT031) [Chlamydia trachomatis D/UW-3/CX]`	`100`	`HGM_OVER`	`39-99`	`-3.030`	`21`	`PB009661 _Gut.Meta.Jp.0000785_ gi\|162567239\|dbj\|BAAU01000237.1\|\|2 (- 3549:4008~0 complete)`
36	`gi\|15604750\|ref\|NP_219534.1\| methionyl-tRNA synthetase (CT032) [Chlamydia trachomatis D/UW-3/CX]`	`550`	`HGM_OVER`	`126-203`	`-4.700`	`12`	`HGC00991 gi\|163600283\|dbj\|BABF01000984.1\|3.0 TMP01348;`
37	`gi\|15604751\|ref\|NP_219535.1\| exodeoxyribonuclease V alpha chain (CT033) [Chlamydia trachomatis D/UW-3/CX]`	`746`	`HGM_OVER`	`380-742`	`-5.740`	`11`	`PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;`
38	`gi\|15604752\|ref\|NP_219536.1\| cationic amino acid transporter (CT034) [Chlamydia trachomatis D/UW-3/CX]`	`341`	`HGM_OVER`	`103-179`	`-4.870`	`21`	`PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;`
39	`gi\|15604753\|ref\|NP_219537.1\| biotin protein ligase (CT035) [Chlamydia trachomatis D/UW-3/CX]`	`257`	`HGM_OVER`	`39-94`	`-3.840`	`19`	`PB031792 gi\|154174791\|ref\|YP_001409041.1\| flavodoxin family protein [Campylobacter curvus 525.92]gi\|112804021\|gb\|EAU01365.1\| flavodoxin family protein [Campylobacter curvus 525.92]`
40	`gi\|15604754\|ref\|NP_219538.1\| hypothetical protein (CT036) [Chlamydia trachomatis D/UW-3/CX]`	`403`	`HGM_OVER`	`8-71`	`-4.150`	`25`	`HGC00552 gi\|162599220\|dbj\|BAAV01006262.1\|2.0 TMP00636;`