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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 4372< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 gi|15607163|ref|NP_214535.1| hypothetical protein (Rv0021c) [Mycobacterium tuberculosis H37Rv] 322 CSGID 6-321 -80.600 30  IDP05696 hypothetical protein lmo2170 [Listeria monocytogenes EGD-e] lmo2170 [Listeria monocytogenes EGD-e]
22 gi|15607164|ref|NP_214536.1| transcriptional regulatory protein WHIB-like WHIB5 (Rv0022c) [Mycobacterium tuberculosis H37Rv] 139 CSGID 42-79 -8.200 12  IDP06096 hypothetical protein jhp1342 [Helicobacter pylori J99] NP_224060 [Helicobacter pylori J99]
23 gi|15607165|ref|NP_214537.1| transcriptional regulatory protein (Rv0023) [Mycobacterium tuberculosis H37Rv] 256 CSGID 1-74 -36.800 25  IDP91833 DNA-binding protein [Streptococcus suis SC84] SSUSC84_0046 [Streptococcus suis SC84]
24 gi|15607166|ref|NP_214538.1| putative secreted protein P60-related protein (Rv0024) [Mycobacterium tuberculosis H37Rv] 281 CSGID 1-281 -53.600 18  IDP05565 gene: spl; peptidoglycan lytic protein P45 [Listeria monocytogenes EGD-e] lmo2505 [Listeria monocytogenes EGD-e]
64-281 -55.200 19  IDP02632 gene: iap; P60 extracellular protein, invasion associated protein Iap [Listeria monocytogenes EGD-e] lmo0582 [Listeria monocytogenes EGD-e]
25 gi|15607167|ref|NP_214539.1| hypothetical protein (Rv0025) [Mycobacterium tuberculosis H37Rv] 120 CSGID 6-115 -8.380 14  IDP01346 agglutination protein VC1621 [Vibrio cholerae O1 biovar El Tor str. N16961]
26 gi|15607168|ref|NP_214540.1| hypothetical protein (Rv0026) [Mycobacterium tuberculosis H37Rv] 448 CSGID 35-437 -12.800 11  IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
27 gi|15607169|ref|NP_214541.1| hypothetical protein (Rv0027) [Mycobacterium tuberculosis H37Rv] 105 CSGID 1-98 -22.200 21  IDP02233 hypothetical protein lmo0056 [Listeria monocytogenes EGD-e] lmo0056 [Listeria monocytogenes EGD-e]
28 gi|15607170|ref|NP_214542.1| hypothetical protein (Rv0028) [Mycobacterium tuberculosis H37Rv] 101 CSGID 2-73 -20.700 15  IDP02296 hypothetical protein GBAA0020 [Bacillus anthracis str. `Ames Ancestor`] GBAA0020 [Bacillus anthracis str. `Ames Ancestor`]
29 gi|15607171|ref|NP_214543.1| hypothetical protein (Rv0029) [Mycobacterium tuberculosis H37Rv] 365 CSGID 3-112 -4.940 12  IDP91479 putative OspC2 [Vibrio parahaemolyticus RIMD 2210633] VPA1331 [Vibrio parahaemolyticus RIMD 2210633]
30 gi|15607172|ref|NP_214544.1| hypothetical protein (Rv0030) [Mycobacterium tuberculosis H37Rv] 109 CSGID 20-105 -10.800 14  IDP02296 hypothetical protein GBAA0020 [Bacillus anthracis str. `Ames Ancestor`] GBAA0020 [Bacillus anthracis str. `Ames Ancestor`]
31 gi|15607173|ref|NP_214545.1| remnant of A transposase (Rv0031) [Mycobacterium tuberculosis H37Rv] 70 CSGID 2-60 -5.750 17  IDP00602 pathogenicity island protein SACOL0903 [Staphylococcus aureus subsp. aureus COL]
32 gi|15607174|ref|NP_214546.1| 8-amino-7-oxononanoate synthase BioF2 (Rv0032) [Mycobacterium tuberculosis H37Rv] 771 CSGID 8-770 -11.800 10  IDP04450 gene: gcvP; glycine dehydrogenase [Yersinia pestis CO92] YPO0905 [Yersinia pestis CO92]
383-770 -95.000 29  IDP92599 serine palmitoyltransferase, putative [Toxoplasma gondii ME49] TGME49_090970 [Toxoplasma gondii ME49]
33 gi|15607175|ref|NP_214547.1| acyl carrier protein AcpA (Rv0033) [Mycobacterium tuberculosis H37Rv] 87 CSGID 1-75 -38.900 36  IDP06101 gene: acpP; acyl carrier protein [Helicobacter pylori J99] NP_223224 [Helicobacter pylori J99]
34 gi|15607176|ref|NP_214548.1| hypothetical protein (Rv0034) [Mycobacterium tuberculosis H37Rv] 131 CSGID 1-119 -33.800 13  IDP91331 hypothetical protein VV2_0244 [Vibrio vulnificus CMCP6] VV2_0244 [Vibrio vulnificus CMCP6]
35 gi|57116683|ref|YP_177686.1| fatty-acid-CoA ligase (Rv0035) [Mycobacterium tuberculosis H37Rv] 562 CSGID 2-549 -120.000 26  IDP95302 RecName: Full=Long-chain-fatty-acid--AMP ligase FadD32; Short=FAAL; AltName: Full=Acyl-AMP synthetase B2HMK0 [Mycobacterium marinum M]
36 gi|15607178|ref|NP_214550.1| hypothetical protein (Rv0036c) [Mycobacterium tuberculosis H37Rv] 257 CSGID 186-249 -7.010 14  IDP04294 putative lipid carrier protein [Yersinia pestis CO92] YPO3477 [Yersinia pestis CO92]
37 gi|15607179|ref|NP_214551.1| integral membrane protein (Rv0037c) [Mycobacterium tuberculosis H37Rv] 441 CSGID 34-437 -26.600 12  IDP04335 putative transport protein [Salmonella typhimurium LT2] STM1543_1_428 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
38 gi|15607180|ref|NP_214552.1| hypothetical protein (Rv0038) [Mycobacterium tuberculosis H37Rv] 202 CSGID 19-199 -79.200 22  IDP91770 gene: yqgE; hypothetical protein STM3096 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
39 gi|15607181|ref|NP_214553.1|(removed signalp:1-16) transmembrane protein (Rv0039c) [Mycobacterium tuberculosis H37Rv] 99 CSGID 15-96 -8.710 13  IDP00055 blasticidin S deaminase, putative BA_3696 [Bacillus anthracis str. Ames]
40 gi|57116684|ref|NP_214554.2|(removed signalp:1-32) secreted proline rich protein MTC28 (proline rich 28 kDa antigen) (Rv0040c) [Mycobacterium tuberculosis H37Rv] 278 CSGID 1-278 -15.400 IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]
37-254 -24.400 11  IDP90380 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_311 [Chlamydia trachomatis D/UW-3/CX]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10.