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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 14323< prev pagenext page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 d1gcvb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 136 CSGID 3-134 -39.600 15  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
22 d1hlba_ a.1.1.2 (A:) Hemoglobin, different isoforms {Caudina arenicola, also known as Molpadia arenicola [TaxId: 7698]} 157 CSGID 12-157 -40.200 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
23 d1tu9a1 a.1.1.2 (A:2-130) Hypothetical protein PA3967 {Pseudomonas aeruginosa [TaxId: 287]} 129 CSGID 1-128 -40.800 15  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
24 d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]} 146 CSGID 2-146 -40.900 14  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
25 d1naza_ a.1.1.2 (A:) Myoglobin {Sperm whale (Physeter catodon) [TaxId: 9755]} 154 CSGID 2-150 -34.300 13  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
26 d1q1fa_ a.1.1.2 (A:) Neuroglobin {Mouse (Mus musculus) [TaxId: 10090]} 148 CSGID 1-148 -45.300 16  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
27 d1h97a_ a.1.1.2 (A:) Trematode hemoglobin/myoglobin {Paramphistomum epiclitum [TaxId: 54403]} 147 CSGID 2-147 -35.200 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
28 d2w72a_ a.1.1.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]} 141 CSGID 1-141 -41.700 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
29 d3qm9a_ a.1.1.2 (A:) automated matches {Thunnus atlanticus [TaxId: 48168]} 145 CSGID 1-142 -31.600 12  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
30 d3qqqa_ a.1.1.2 (A:) automated matches {Trema tomentosa [TaxId: 3480]} 151 CSGID 1-150 -46.600 18  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
31 d3l0fa_ a.1.1.3 (A:) Phycocyanin alpha subunit {Thermosynechococcus elongatus [TaxId: 197221]} 162 CSGID 5-162 -6.160 12  IDP01718 hypothetical protein YPO3473 [Yersinia pestis CO92] YPO3473 [Yersinia pestis CO92]
32 d1b8da_ a.1.1.3 (A:) Phycoerythrin alpha subunit {Red alga (Griffithsia monilis) [TaxId: 42003]} 164 CSGID 1-163 -6.190 IDP04535 gene: mxiN; MxiN, putative component of the Mxi-Spa secretion machinery [Shigella flexneri] CAC05816 [Shigella flexneri]
33 d1xg0c_ a.1.1.3 (C:) Phycoerythrin beta subunit {Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]} 175 CSGID 37-175 -6.390 IDP01109 hypothetical protein GBAA_pXO1_0148 GBAA_pXO1_0148 [Bacillus anthracis str. `Ames Ancestor`]
34 d4po5b_ a.1.1.3 (B:) automated matches {Synechocystis sp. [TaxId: 1111708]} 161 CSGID 18-161 -6.560 IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL]
35 d2xkia_ a.1.1.4 (A:) Nerve tissue mini-hemoglobin (neural globin) {Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]} 110 CSGID 5-110 -32.400 17  IDP00644 flavohemoprotein, putative SACOL0220 [Staphylococcus aureus subsp. aureus COL]
36 d2wy4a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]} 139 CSGID 1-139 -54.000 41  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]
37 d2ig3a_ a.1.1.0 (A:) automated matches {Campylobacter jejuni [TaxId: 197]} 127 CSGID 8-120 -8.390 11  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
38 d3pt8a_ a.1.1.0 (A:) automated matches {Clam (Lucina pectinata) [TaxId: 244486]} 151 CSGID 3-150 -42.800 19  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
39 d2bk9a_ a.1.1.0 (A:) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} 153 CSGID 1-153 -39.200 11  IDP01484 nitric oxide dioxygenase VCA0183 [Vibrio cholerae O1 biovar El Tor str. N16961]
40 d2c0ka_ a.1.1.0 (A:) automated matches {Gasterophilus intestinalis [TaxId: 84525]} 150 CSGID 1-150 -37.700 13  IDP00562 gene: hmp; nitric oxide dioxygenase YPO2908 [Yersinia pestis CO92]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.