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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 61954next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 5NQJ Entity 1(prereleased) 377 H.sapiens 41-376 -49.400 12  sp|Q969V3|NCLN_HUMAN Nicalin OS=Homo sapiens GN=NCLN PE=1 SV=2
70-373 -59.700 16  sp|Q16769|QPCT_HUMAN(removed signalp:1-28) Glutaminyl-peptide cyclotransferase OS=Homo sapiens GN=QPCT PE=1 SV=1
2 5OLI Entity 1(prereleased) 327 H.sapiens 2-327 -123.000 100  sp|Q5T440|CA069_HUMAN Putative transferase C1orf69, mitochondrial OS=Homo sapiens GN=C1orf69 PE=1 SV=1
3 5VMA Entity 1(prereleased) 703 H.sapiens 1-277 -6.340 17  sp|Q92831|KAT2B_HUMAN Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3
4 5W1P Entity 1(prereleased) 363 H.sapiens 1-204 -11.600 sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2
43-346 -85.400 17  sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1
5 5Y8X Entity 1(prereleased) 398 H.sapiens 29-397 -88.600 22  sp|P36269|GGT5_HUMAN(removed signalp:1-26) Gamma-glutamyltransferase 5 OS=Homo sapiens GN=GGT5 PE=1 SV=2
6 5Y8X Entity 2(prereleased) 187 H.sapiens 1-179 -76.700 33  sp|Q9BX51|GGTL1_HUMAN Gamma-glutamyltransferase light chain 1 OS=Homo sapiens GN=GGTLC1 PE=2 SV=2
7 5YM9 Entity 1(prereleased) 384 H.sapiens 49-80 -6.260 15  sp|O14633|LCE2B_HUMAN Late cornified envelope protein 2B OS=Homo sapiens GN=LCE2B PE=2 SV=1
8 5YSG Entity 1(prereleased) 124 H.sapiens 1-119 -11.200 sp|P40259|CD79B_HUMAN(removed signalp:1-28) B-cell antigen receptor complex-associated protein beta chain OS=Homo sapiens GN=CD79B PE=1 SV=1
13-101 -16.800 19  sp|P00450|CERU_HUMAN(removed signalp:1-19) Ceruloplasmin OS=Homo sapiens GN=CP PE=1 SV=1
9 5YTA Entity 1(prereleased) 332 H.sapiens 1-332 -96.800 97  sp|P07195|LDHB_HUMAN L-lactate dehydrogenase B chain OS=Homo sapiens GN=LDHB PE=1 SV=2
10 5YW3 Entity 1(prereleased) 124 H.sapiens 1-119 -11.300 sp|P40259|CD79B_HUMAN(removed signalp:1-28) B-cell antigen receptor complex-associated protein beta chain OS=Homo sapiens GN=CD79B PE=1 SV=1
13-101 -16.700 20  sp|P00450|CERU_HUMAN(removed signalp:1-19) Ceruloplasmin OS=Homo sapiens GN=CP PE=1 SV=1
11 5YXK Entity 1(prereleased) 111 H.sapiens 1-111 -52.900 98  sp|P42081|CD86_HUMAN(removed signalp:1-23) T-lymphocyte activation antigen CD86 OS=Homo sapiens GN=CD86 PE=1 SV=2
12 5Z0B Entity 1(prereleased) 585 H.sapiens 1-585 -161.000 100  sp|P02768|ALBU_HUMAN(removed signalp:1-18) Serum albumin OS=Homo sapiens GN=ALB PE=1 SV=2
13 5Z0M Entity 1(prereleased) 275 H.sapiens 1-273 -75.300 26  sp|P17643|TYRP1_HUMAN(removed signalp:1-24) 5,6-dihydroxyindole-2-carboxylic acid oxidase OS=Homo sapiens GN=TYRP1 PE=1 SV=2
14 5Z0M Entity 2(prereleased) 128 H.sapiens 1-115 -7.010 10  sp|Q9H5V8|CDCP1_HUMAN(removed signalp:1-29) CUB domain-containing protein 1 OS=Homo sapiens GN=CDCP1 PE=1 SV=3
15 5Z4O Entity 1(prereleased) 208 H.sapiens 1-207 -82.100 23  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3
16 5Z4P Entity 3(prereleased) 440 H.sapiens 1-440 -129.000 96  sp|Q6PEY2|TBA3E_HUMAN Tubulin alpha-3E chain OS=Homo sapiens GN=TUBA3E PE=1 SV=2
17 5Z4P Entity 4(prereleased) 431 H.sapiens 1-431 -120.000 82  sp|Q99867|TBB4Q_HUMAN Putative tubulin beta-4q chain OS=Homo sapiens GN=TUBB4Q PE=5 SV=1
18 5Z4P Entity 6(prereleased) 378 H.sapiens 1-378 -123.000 88  sp|Q8NG68|TTL_HUMAN Tubulin--tyrosine ligase OS=Homo sapiens GN=TTL PE=1 SV=2
19 5Z4Q Entity 5(prereleased) 186 H.sapiens 1-186 -100.000 99  sp|Q9H169|STMN4_HUMAN Stathmin-4 OS=Homo sapiens GN=STMN4 PE=2 SV=1
20 5Z6B Entity 1(prereleased) 427 H.sapiens 61-367 -5.540 sp|Q75VX8|FA59B_HUMAN Protein FAM59B OS=Homo sapiens GN=FAM59B PE=2 SV=3

FFAS is supported by the NIH grant R01-GM087218-01
1 3 6 4 2 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lesley SA, Kuhn P, Godzik A., Deacon AM, Mathews I, Kreusch A, Spraggon G, Klock HE, McMullan D, Shin T, Vincent J, Robb A, Brinen LS, Miller MD, McPhillips TM, Miller MA, Scheibe D, Canaves JM, Guda C, Jaroszewski L, Selby TL, Elsliger MA, Wooley J, Taylor SS, Hodgson KO, Wilson IA, Schultz PG, Stevens RC. Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline. Proc Natl Acad Sci U S A. 2002 Sep 3;99(18):11664-9. Epub 2002 Aug 22.