FFAS03 list of results T.maritima / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 21-40 of 1872 < prev page next page >

# Query Length Result vs. Range Score %id Covered by template(s)
21 TM0021 TM0021 281902 PDB-2003-02-27 102 VFDB 1-102 -51.100 41 [S] COG1993 Uncharacterized conserved protein
22 TM0022 TM0022 281903 Purified-2006-07-20 516 VFDB 6-516 -133.000 30 [L] COG0323 DNA mismatch repair enzyme (predicted ATPase)
23 TM0023 TM0023 281904 Purified-2001-08-24 656 VFDB 1-348 -28.800 10 [T] COG2770 FOG: HAMP domain
298-656 -47.200 23 [NT] COG0840 Methyl-accepting chemotaxis protein
24 TM0024 TM0024 281905 Purified-2001-08-24 642 VFDB 196-472 -51.100 22 [G] COG2273 Beta-glucanase/Beta-glucan synthetase
25 TM0025 TM0025 281906 Purified-2001-01-30 721 VFDB 2-316 -37.000 17 [G] COG1472 Beta-glucosidase-related glycosidases
602-715 -9.760 14 [C] COG3241 Azurin
26 TM0026 TM0026 281907 Purified-2001-01-30 68 VFDB 5-67 -9.740 11 [S] COG4331 Predicted membrane protein
27 TM0027 TM0027 281908 Purified-2001-01-30 268 VFDB 2-267 -105.000 35 [V] COG4167 ABC-type antimicrobial peptide transport system, ATPase component
28 TM0028 TM0028 281909 Purified-2001-08-29 330 VFDB 3-330 -115.000 33 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
29 TM0029 TM0029 281910 Purified-2001-01-30 280 VFDB 1-278 -93.100 22 [V] COG4171 ABC-type antimicrobial peptide transport system, permease component
30 TM0030 TM0030 281911 Purified-2001-01-30 338 VFDB 6-335 -109.000 36 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
31 TM0031 TM0031 281912 Purified-2001-08-24 606 VFDB 1-540 -102.000 18 [E] COG0747 ABC-type dipeptide transport system, periplasmic component
32 TM0032 TM0032 281913 Purified-2005-03-03 381 VFDB 1-64 -13.800 12 [S] COG3388 Uncharacterized protein conserved in archaea
39-375 -72.900 17 [KG] COG1940 Transcriptional regulator/sugar kinase
33 TM0033 TM0033 281914 Purified-2001-08-24 395 VFDB 1-395 -90.000 26 [R] COG4099 Predicted peptidase
34 TM0034 TM0034 281915 Purified-2001-08-29 357 VFDB 1-353 -99.600 34 [R] COG2768 Uncharacterized Fe-S center protein
35 TM0035 TM0035 281916 Purified-2001-08-24 485 VFDB 1-258 -9.630 8 [O] KOG2661 Peptidase family M48
36 TM0036 TM0036 281917 Purified-2001-08-24 174 VFDB 1-171 -55.500 35 [F] COG1618 Predicted nucleotide kinase
37 TM0037 TM0037 281918 Purified-2001-08-24 416 VFDB 28-366 -12.600 13 [R] COG1418 Predicted HD superfamily hydrolase
91-395 -47.100 18 [KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain
38 TM0038 TM0038 281919 Purified-2001-02-14 120 VFDB 6-119 -51.100 27 [H] COG0720 6-pyruvoyl-tetrahydropterin synthase
39 TM0039 TM0039 281920 Crystal|NMR-2008-01-13 259 VFDB 1-253 -106.000 40 [S] COG1469 Uncharacterized conserved protein
40 TM0040 TM0040 281921 Purified-2003-03-06 278 VFDB 14-275 -80.900 41 [H] KOG2544 Dihydropteroate synthase/7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase/Dihydroneopterin aldolase

FFAS is supported by the NIH grant R01-GM087218-01

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
21	`TM0021 TM0021 281902 PDB-2003-02-27`	`102`	`VFDB`	`1-102`	`-51.100`	`41`	`[S] COG1993 Uncharacterized conserved protein`
22	`TM0022 TM0022 281903 Purified-2006-07-20`	`516`	`VFDB`	`6-516`	`-133.000`	`30`	`[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)`
23	`TM0023 TM0023 281904 Purified-2001-08-24`	`656`	`VFDB`	`1-348`	`-28.800`	`10`	`[T] COG2770 FOG: HAMP domain`
				`298-656`	`-47.200`	`23`	`[NT] COG0840 Methyl-accepting chemotaxis protein`
24	`TM0024 TM0024 281905 Purified-2001-08-24`	`642`	`VFDB`	`196-472`	`-51.100`	`22`	`[G] COG2273 Beta-glucanase/Beta-glucan synthetase`
25	`TM0025 TM0025 281906 Purified-2001-01-30`	`721`	`VFDB`	`2-316`	`-37.000`	`17`	`[G] COG1472 Beta-glucosidase-related glycosidases`
				`602-715`	`-9.760`	`14`	`[C] COG3241 Azurin`
26	`TM0026 TM0026 281907 Purified-2001-01-30`	`68`	`VFDB`	`5-67`	`-9.740`	`11`	`[S] COG4331 Predicted membrane protein`
27	`TM0027 TM0027 281908 Purified-2001-01-30`	`268`	`VFDB`	`2-267`	`-105.000`	`35`	`[V] COG4167 ABC-type antimicrobial peptide transport system, ATPase component`
28	`TM0028 TM0028 281909 Purified-2001-08-29`	`330`	`VFDB`	`3-330`	`-115.000`	`33`	`[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component`
29	`TM0029 TM0029 281910 Purified-2001-01-30`	`280`	`VFDB`	`1-278`	`-93.100`	`22`	`[V] COG4171 ABC-type antimicrobial peptide transport system, permease component`
30	`TM0030 TM0030 281911 Purified-2001-01-30`	`338`	`VFDB`	`6-335`	`-109.000`	`36`	`[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components`
31	`TM0031 TM0031 281912 Purified-2001-08-24`	`606`	`VFDB`	`1-540`	`-102.000`	`18`	`[E] COG0747 ABC-type dipeptide transport system, periplasmic component`
32	`TM0032 TM0032 281913 Purified-2005-03-03`	`381`	`VFDB`	`1-64`	`-13.800`	`12`	`[S] COG3388 Uncharacterized protein conserved in archaea`
				`39-375`	`-72.900`	`17`	`[KG] COG1940 Transcriptional regulator/sugar kinase`
33	`TM0033 TM0033 281914 Purified-2001-08-24`	`395`	`VFDB`	`1-395`	`-90.000`	`26`	`[R] COG4099 Predicted peptidase`
34	`TM0034 TM0034 281915 Purified-2001-08-29`	`357`	`VFDB`	`1-353`	`-99.600`	`34`	`[R] COG2768 Uncharacterized Fe-S center protein`
35	`TM0035 TM0035 281916 Purified-2001-08-24`	`485`	`VFDB`	`1-258`	`-9.630`	`8`	`[O] KOG2661 Peptidase family M48`
36	`TM0036 TM0036 281917 Purified-2001-08-24`	`174`	`VFDB`	`1-171`	`-55.500`	`35`	`[F] COG1618 Predicted nucleotide kinase`
37	`TM0037 TM0037 281918 Purified-2001-08-24`	`416`	`VFDB`	`28-366`	`-12.600`	`13`	`[R] COG1418 Predicted HD superfamily hydrolase`
				`91-395`	`-47.100`	`18`	`[KT] COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain`
38	`TM0038 TM0038 281919 Purified-2001-02-14`	`120`	`VFDB`	`6-119`	`-51.100`	`27`	`[H] COG0720 6-pyruvoyl-tetrahydropterin synthase`
39	`TM0039 TM0039 281920 Crystal\|NMR-2008-01-13`	`259`	`VFDB`	`1-253`	`-106.000`	`40`	`[S] COG1469 Uncharacterized conserved protein`
40	`TM0040 TM0040 281921 Purified-2003-03-06`	`278`	`VFDB`	`14-275`	`-80.900`	`41`	`[H] KOG2544 Dihydropteroate synthase/7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase/Dihydroneopterin aldolase`