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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 2171next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15675949|ref|NP_273067.1| putative acetyltransferase (NMB0001) [Neisseria meningitidis MC58] 163 NEW_HUMAN_DOMAINS 75-145 -4.900 14  sp|Q8N5I3|KCNRG_HUMAN Potassium channel regulatory protein OS=Homo sapiens GN=KCNRG PE=1 SV=1
2 gi|15675950|ref|NP_273068.1|(removed signalp:1-36) hypothetical protein (NMB0002) [Neisseria meningitidis MC58] 95 NEW_HUMAN_DOMAINS 3-85 -6.600 12  sp|Q96ER9|CCD51_HUMAN Coiled-coil domain-containing protein 51 OS=Homo sapiens GN=CCDC51 PE=1 SV=2
3 gi|15675951|ref|NP_273069.1| glutamyl-tRNA synthetase (NMB0003) [Neisseria meningitidis MC58] 464 NEW_HUMAN_DOMAINS 235-314 -6.160 15  tr|E9PIN2|E9PIN2_HUMAN Uncharacterized protein OS=Homo sapiens GN=PDE4DIP PE=4 SV=1
4 gi|15675952|ref|NP_273070.1|(removed signalp:1-37) EpiH/GdmH-related protein (NMB0004) [Neisseria meningitidis MC58] 177 NEW_HUMAN_DOMAINS 14-96 -4.990 14  sp|P78559|MAP1A_HUMAN Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6
5 gi|15675953|ref|NP_273071.1| arsenate reductase (NMB0005) [Neisseria meningitidis MC58] 117 NEW_HUMAN_DOMAINS 33-95 -5.280 14  sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2
6 gi|15675954|ref|NP_273072.1|(removed signalp:1-22) thioredoxin-related protein (NMB0006) [Neisseria meningitidis MC58] 138 NEW_HUMAN_DOMAINS 9-34 -6.080 11  sp|A6NFU0|F187A_HUMAN Ig-like V-type domain-containing protein FAM187A OS=Homo sapiens GN=FAM187A PE=3 SV=1
7 gi|15675955|ref|NP_273073.1| ABC transporter ATP-binding protein (NMB0007) [Neisseria meningitidis MC58] 216 NEW_HUMAN_DOMAINS 22-45 -7.140 16  sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3
8 gi|15675956|ref|NP_273074.1| putative cell division protein FtsX (NMB0008) [Neisseria meningitidis MC58] 305 NEW_HUMAN_DOMAINS 51-126 -5.400 10  sp|Q96PP4|TSG13_HUMAN Testis-specific gene 13 protein OS=Homo sapiens GN=TSGA13 PE=1 SV=1
9 gi|15675957|ref|NP_273075.1| BolA/YrbA family protein (NMB0009) [Neisseria meningitidis MC58] 82 NEW_HUMAN_DOMAINS 7-80 -5.760 13  sp|O75717|WDHD1_HUMAN WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens GN=WDHD1 PE=1 SV=1
10 gi|15675958|ref|NP_273076.1| phosphoglycerate kinase (NMB0010) [Neisseria meningitidis MC58] 403 NEW_HUMAN_DOMAINS 306-360 -5.850 18  sp|Q5MNZ6|WIPI3_HUMAN WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens GN=WDR45L PE=2 SV=2
11 gi|15675959|ref|NP_273077.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase (NMB0011) [Neisseria meningitidis MC58] 417 NEW_HUMAN_DOMAINS 380-416 -4.140 13  tr|F8WA61|F8WA61_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIF9 PE=3 SV=1
12 gi|15675960|ref|NP_273078.1| hypothetical protein (NMB0012) [Neisseria meningitidis MC58] 323 NEW_HUMAN_DOMAINS 90-120 -4.590 tr|E7EUG5|E7EUG5_HUMAN Uncharacterized protein OS=Homo sapiens GN=THUMPD2 PE=4 SV=1
13 gi|15675961|ref|NP_273079.1| hypothetical protein (NMB0013) [Neisseria meningitidis MC58] 149 NEW_HUMAN_DOMAINS 13-148 -5.890 sp|Q53T94|TAF1B_HUMAN TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Homo sapiens GN=TAF1B PE=1 SV=1
14 gi|15675962|ref|NP_273080.1| 3-deoxy-D-manno-octulosonic-acid transferase (NMB0014) [Neisseria meningitidis MC58] 423 NEW_HUMAN_DOMAINS 121-204 -6.460 18  tr|C9JKX0|C9JKX0_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIAA0430 PE=4 SV=1
15 gi|15675963|ref|NP_273081.1| 6-phosphogluconate dehydrogenase (NMB0015) [Neisseria meningitidis MC58] 482 NEW_HUMAN_DOMAINS 96-362 -7.900 14  sp|Q9NZQ8|TRPM5_HUMAN Transient receptor potential cation channel subfamily M member 5 OS=Homo sapiens GN=TRPM5 PE=1 SV=1
16 gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58] 78 NEW_HUMAN_DOMAINS 24-70 -5.780 17  sp|Q9H1P6|CT085_HUMAN Uncharacterized protein C20orf85 OS=Homo sapiens GN=C20orf85 PE=2 SV=1
17 gi|15675965|ref|NP_273083.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NMB0017) [Neisseria meningitidis MC58] 307 NEW_HUMAN_DOMAINS 92-226 -4.850 12  tr|F5GY20|F5GY20_HUMAN Uncharacterized protein OS=Homo sapiens GN=GPNMB PE=4 SV=1
18 gi|15675966|ref|NP_273084.1|(removed signalp:1-27) pilin PilE (NMB0018) [Neisseria meningitidis MC58] 143 NEW_HUMAN_DOMAINS 1-31 -10.000 22  sp|Q8WW14|CJ082_HUMAN Uncharacterized protein C10orf82 OS=Homo sapiens GN=C10orf82 PE=2 SV=2
19 gi|77358699|ref|YP_338284.1| pilS cassette (NMB0019) [Neisseria meningitidis MC58] 136 NEW_HUMAN_DOMAINS 3-83 -8.760 13  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1
20 gi|77358700|ref|YP_338285.1| pilS cassette (NMB0020) [Neisseria meningitidis MC58] 124 NEW_HUMAN_DOMAINS 3-83 -8.580 13  sp|Q86X10|RLGPB_HUMAN Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.