FFAS03 list of results T.maritima / VFDB

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1872 next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 TM0001 TM0001 281882 Purified-2001-08-24 41 VFDB 5-33 -3.520 23 [Y] KOG2992 Nucleolar GTPase/ATPase p130
2 TM0002 TM0002 281883 Purified-2001-08-29 41 VFDB 8-35 -4.680 28 [J] COG0256 Ribosomal protein L18
3 TM0003 TM0003 281884 Purified-2001-12-06 40 VFDB 3-37 -4.330 14 [S] KOG3098 Uncharacterized conserved protein
4 TM0004 TM0004 281885 Purified-2004-07-19 31 VFDB 1-29 -3.590 34 [P] COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit
5 TM0005 TM0005 281886 Purified-2001-01-30 650 VFDB 2-649 -124.000 24 [L] KOG1803 DNA helicase
6 TM0006 TM0006 281887 Diffraction|HSQC-2004-07-13 345 VFDB 4-344 -70.100 20 [H] COG1441 O-succinylbenzoate synthase
7 TM0007 TM0007 281888 Purified-2004-07-19 438 VFDB 13-366 -21.200 14 [O] KOG0909 Peptide:N-glycanase
57-372 -32.200 9 [R] COG1800 Predicted transglutaminase-like proteases
149-425 -45.000 15 [E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases
8 TM0008 TM0008 281889 Crystal|NMR-2001-04-01 224 VFDB 1-224 -80.900 31 [R] COG1878 Predicted metal-dependent hydrolase
9 TM0009 TM0009 281890 Purified-2001-02-14 142 VFDB 1-142 -50.700 20 [S] COG1633 Uncharacterized conserved protein
10 TM0010 TM0010 281891 Purified-2005-03-03 607 VFDB 2-82 -15.700 23 [C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit
46-537 -103.000 33 [C] KOG2658 NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit
407-604 -27.000 25 [C] COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
11 TM0011 TM0011 281892 Purified-2004-02-02 128 VFDB 1-127 -44.700 23 [C] COG3411 Ferredoxin
12 TM0012 TM0012 281893 Purified-2001-08-29 176 VFDB 8-172 -79.200 27 [C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit
13 TM0013 TM0013 281894 Purified-2001-08-24 253 VFDB 1-250 -58.400 14 [C] COG0426 Uncharacterized flavoproteins
14 TM0014 TM0014 281895 Purified-2001-01-30 278 VFDB 4-275 -42.100 22 [NT] COG0840 Methyl-accepting chemotaxis protein
15 TM0015 TM0015 281896 PDB-2007-09-14 192 VFDB 7-192 -51.900 21 [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
16 TM0016 TM0016 281897 Purified-2001-08-24 101 VFDB 19-95 -33.900 42 [C] COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit
17 TM0017 TM0017 281898 Purified-2003-03-05 394 VFDB 6-394 -99.000 31 [C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
18 TM0018 TM0018 281899 Purified-2001-08-24 324 VFDB 12-308 -74.100 19 [C] COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
19 TM0019 TM0019 281900 Crystal|NMR-2004-03-31 256 VFDB 2-251 -91.100 33 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
20 TM0020 TM0020 281901 Purified-2001-08-24 127 VFDB 4-127 -62.900 29 [D] COG0239 Integral membrane protein possibly involved in chromosome condensation

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#	Query	Length	Result vs.	Range	Score	%id	Covered by template(s)
1	`TM0001 TM0001 281882 Purified-2001-08-24`	`41`	`VFDB`	`5-33`	`-3.520`	`23`	`[Y] KOG2992 Nucleolar GTPase/ATPase p130`
2	`TM0002 TM0002 281883 Purified-2001-08-29`	`41`	`VFDB`	`8-35`	`-4.680`	`28`	`[J] COG0256 Ribosomal protein L18`
3	`TM0003 TM0003 281884 Purified-2001-12-06`	`40`	`VFDB`	`3-37`	`-4.330`	`14`	`[S] KOG3098 Uncharacterized conserved protein`
4	`TM0004 TM0004 281885 Purified-2004-07-19`	`31`	`VFDB`	`1-29`	`-3.590`	`34`	`[P] COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit`
5	`TM0005 TM0005 281886 Purified-2001-01-30`	`650`	`VFDB`	`2-649`	`-124.000`	`24`	`[L] KOG1803 DNA helicase`
6	`TM0006 TM0006 281887 Diffraction\|HSQC-2004-07-13`	`345`	`VFDB`	`4-344`	`-70.100`	`20`	`[H] COG1441 O-succinylbenzoate synthase`
7	`TM0007 TM0007 281888 Purified-2004-07-19`	`438`	`VFDB`	`13-366`	`-21.200`	`14`	`[O] KOG0909 Peptide:N-glycanase`
				`57-372`	`-32.200`	`9`	`[R] COG1800 Predicted transglutaminase-like proteases`
				`149-425`	`-45.000`	`15`	`[E] COG1305 Transglutaminase-like enzymes, putative cysteine proteases`
8	`TM0008 TM0008 281889 Crystal\|NMR-2001-04-01`	`224`	`VFDB`	`1-224`	`-80.900`	`31`	`[R] COG1878 Predicted metal-dependent hydrolase`
9	`TM0009 TM0009 281890 Purified-2001-02-14`	`142`	`VFDB`	`1-142`	`-50.700`	`20`	`[S] COG1633 Uncharacterized conserved protein`
10	`TM0010 TM0010 281891 Purified-2005-03-03`	`607`	`VFDB`	`2-82`	`-15.700`	`23`	`[C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit`
				`46-537`	`-103.000`	`33`	`[C] KOG2658 NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit`
				`407-604`	`-27.000`	`25`	`[C] COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB`
11	`TM0011 TM0011 281892 Purified-2004-02-02`	`128`	`VFDB`	`1-127`	`-44.700`	`23`	`[C] COG3411 Ferredoxin`
12	`TM0012 TM0012 281893 Purified-2001-08-29`	`176`	`VFDB`	`8-172`	`-79.200`	`27`	`[C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit`
13	`TM0013 TM0013 281894 Purified-2001-08-24`	`253`	`VFDB`	`1-250`	`-58.400`	`14`	`[C] COG0426 Uncharacterized flavoproteins`
14	`TM0014 TM0014 281895 Purified-2001-01-30`	`278`	`VFDB`	`4-275`	`-42.100`	`22`	`[NT] COG0840 Methyl-accepting chemotaxis protein`
15	`TM0015 TM0015 281896 PDB-2007-09-14`	`192`	`VFDB`	`7-192`	`-51.900`	`21`	`[C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit`
16	`TM0016 TM0016 281897 Purified-2001-08-24`	`101`	`VFDB`	`19-95`	`-33.900`	`42`	`[C] COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit`
17	`TM0017 TM0017 281898 Purified-2003-03-05`	`394`	`VFDB`	`6-394`	`-99.000`	`31`	`[C] COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit`
18	`TM0018 TM0018 281899 Purified-2001-08-24`	`324`	`VFDB`	`12-308`	`-74.100`	`19`	`[C] COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit`
19	`TM0019 TM0019 281900 Crystal\|NMR-2004-03-31`	`256`	`VFDB`	`2-251`	`-91.100`	`33`	`[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)`
20	`TM0020 TM0020 281901 Purified-2001-08-24`	`127`	`VFDB`	`4-127`	`-62.900`	`29`	`[D] COG0239 Integral membrane protein possibly involved in chromosome condensation`