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Query: gi|30260205|ref|NP_842582.1| glutamine amidotransferase subunit PdxT (BA_0011) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYDFMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYDEAHIGAMDITVERNAFGRQKDSFEAALSIKGVGEDFVGVFIRAPYVVDVADDVEVLSTHGDRMVAVKQGPFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVVLast
1 -4.230PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  12  3...........TIQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLKLNIRSLIASQEEDSKDLLDLCIDVIY................................................................................................................ 75
2 -3.960PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  5  86..QLSNIKIDENIKSFDRVARKYGIDYSLKKEVGADPPKYLVFFKAKDVDVMTAAFRE.......................................................................................................................................... 142
3 -3.710PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  14  270.................................................................................................................................................ARVYVEQKNFSKAKQAYRILSLKY-PEKSG------FFADQIRAIEKLQ.. 311
4 -3.390PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  13  102.......ERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDI-VPCCGGLEMAAKKALQDSGKFIPWQVATISIDG........................................................................................ 220
5 -2.880PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  8  11..GIVLKEYGKNIQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVRDTEEHTTKLWDHLFIMSNFKLDVDTPY--------MPDIAVLGRKPERVPYNHNKLKYKHYGKNINLLIEQAILKEDGAEKEDA................................................................ 133
6 -2.740PB053359 gi|153891307|ref|ZP_02012332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]gi|151582630|gb|EDN46158.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]  ali follow..  8  1.....LIAPDGSFPPVGRSIAYRCGAFQLLAQMALRRELPEGVAPAQVRGALTAVIRAPGTFDNDTGNDGAGWLRIGLAGHQPGLGEVYISTGSLTTAFLPLGLPASDDFWSQPD................................................................................. 117
7 -2.410HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  12  1............MSKKKRGEERMKEEDNIL---KKVGKKNSFKVPEGYFENLTSEVMGK--EVKQPMMWIRMKPLLYMAAMFIGAA.............................................................................................................. 79
8 -2.080HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  3  1.............................LQTNYKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMKHRDID.......................................................................................................... 61
9 -1.840HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  16  34..TVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAAL----GGATALSSIVAPGDPCEAASRVARANGAEVTTC..................................................................................................................... 106
10 -1.820HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  8  20...........QLAQEQHKLKRLENRKKYLEKGERQKRTHRLCNLGGTIESLAKDLTRTEMTELMEYIFS.............................................................................................................................. 81
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 9 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Godzik A. Improving the quality of twilight-zone alignments. Protein Sci. 2000 Aug;9(8):1487-96.