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Query: gi|30260196|ref|NP_842573.1| chromosomal replication initiation protein (BA_0001) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MENISDLWNSALKELEKKVSKPSYETWLKSTTAHNLKKDVLTITAPNEFARDWLESHYSELISETLYDLTGAKLAIRFIIPQSQAEEEIDLPPAKPNAAQDDSNHLPQSMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIEHNPNAKVVYLSSEKFTNEFINSIRDNKAVDFRNKYRNVDVLLIDDIQFLAGKEQTQEEFFHTFNALHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLINKDINADLAAEALKDIIPNSKPKIISIYDIQKAVGDVYQVKLEDFKAKKRTKSVAFPRQIAMYLSRELTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLKTDTQLQKQVEEINDILKLast
1 -5.120sp|Q6ZV50|RFX8_HUMAN DNA-binding protein RFX8 OS=Homo sapiens GN=RFX8 PE=2 SV=2  ali   11  9..................................................................................................................................................................................FRRCPFLEQEQAKKYSCNMMAFLADEYCNYCRDILRNV----------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVT-------LFVKRLRRKTYLSNMAKTMRMVLKSK-------RRVSVLKSDLQAIINQGTLA...................................................................... 182
2 -5.050sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3  ali   12  3.........................................................................................................................................................................................................................................................PEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPTGSKTELENIEVTQGMSAETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLE........................................... 156
3 -4.790sp|Q8TB22|SPT20_HUMAN Spermatogenesis-associated protein 20 OS=Homo sapiens GN=SPATA20 PE=2 SV=3  ali   20  7...................................................................................................................................................................................................................................EMVRALSAQQQTLKQIVICGDRQAKDTKALVQCVHSVYIPNKVLILADGDLSRQLPFLSTLRRLEDQATAYVCENQACSVPITDPCELRKLLH.............................................................................................................................. 103
4 -4.500sp|Q7Z401|MYCPP_HUMAN C-myc promoter-binding protein OS=Homo sapiens GN=DENND4A PE=1 SV=2  ali   19  20.................................................................................................................................................PLYILWNAHTQKYPMVHLLQKSDNSFNQELLKSMVKSIK-MNDVYGPMSQILETLNKCPHFKRQRSLYREILFLSGRENIDKEYKMAYDRLTPSQVKSTHNCDRPPS.................................................................................................................................................................................................. 134
5 -4.460sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2  ali   13  30.............................................................................................................................EKLKDLIHCWAESPKPIFAKIINLYHHPGCGGTTLAMHVLWDLKKNFRCAVLKNKTTD--FAEIAEQVINLVTYRAKSHQDYIPVLLLDDFEEQENVYFLQNAIHSVLAEKDLRYEKIILNCMRSRNDSIALNYQLSS....................................................................................................................................................................................... 177
6 -4.180sp|Q9UBD5|ORC3_HUMAN Origin recognition complex subunit 3 OS=Homo sapiens GN=ORC3 PE=1 SV=1  ali   14  12......................................................................................................................................................................................NFLSNNQCENIR--RLPSFRRYVEKQA-LLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKY--PLGRQIRELYCTCLEKNIDSEEYASVLQLLRMLAKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLA.......................................................................................................................... 155
7 -4.180tr|E7ENV6|E7ENV6_HUMAN Uncharacterized protein OS=Homo sapiens GN=ORC3 PE=4 SV=2  ali   14  12......................................................................................................................................................................................NFLSNNQCENIR--RLPSFRRYVEKQA-LLTNERYLKEETQLLLENLHVYHMNYFLVLRCLHKFTSSLPKY--PLGRQIRELYCTCLEKNIDSEEYASVLQLLRMLAKDELMTILEKCFKVFKSYCENHLGSTAKRIEEFLA.......................................................................................................................... 155
8 -4.170sp|Q8HWS3|RFX6_HUMAN DNA-binding protein RFX6 OS=Homo sapiens GN=RFX6 PE=1 SV=2  ali   10  16..............................................................................................................................................................................................GCISKDKVDTLIMMYKTHCQCILDNAING--NFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVR-------RFVSSLKRQTSFLHLAQIARPALFDQ-------HVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKN.................................. 221
9 -4.130sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4  ali   14  4.........................................................................................................................................................................................................................................................PEFNWSQMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLSAATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFAS---SLGFTEIEAEKSMSSGGILRQCLRLVCAVAVRNCL............................................ 153
10 -4.050sp|Q9BX69|CARD6_HUMAN Caspase recruitment domain-containing protein 6 OS=Homo sapiens GN=CARD6 PE=1 SV=2  ali   12  6.................................................................................................................................................PVISFGYCSFSKSRILNTL---LSPAQLKLHKIFLHQDLPLLVLPRQISDGLVE-FPDSDDRKENPFFQKPVALANLRGNLESFWTQFGFLMEVSSAVFF-----------------------FTDCLGEKEWDLLMFLGEAAIERCYFVLSSQARESEEAQIFQRILNLKPAQLLFWERGDAGDRRKNMEGLQAALQEVMFSSCLRCVSVEDMAA-LARELGIQVDE......................................................................... 212
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.