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Query: gi|30260200|ref|NP_842577.1| DNA gyrase subunit B (BA_0005) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEQKQMQENSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKVIGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQYNEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGGDFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLDILast
1 -5.840sp|Q6IEE8|SN12L_HUMAN Schlafen family member 12-like OS=Homo sapiens GN=SLFN12L PE=2 SV=3  ali   15  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................MQLSEGLAAHGTRRAGKWKRTQ--VPLLGEECADMDLARFVLFFGNGLAAGKMNISIDLDTNYAELVLNVGRVTL............................................................................................................................................ 73
2 -5.810sp|Q14703|MBTP1_HUMAN Membrane-bound transcription factor site-1 protease OS=Homo sapiens GN=MBTPS1 PE=1 SV=1  ali   13  10...........................................................................................................................................................................................................................................................................................................................................................................................................................................LYEGETLANHDMYYASGCSIAKFPEDGVVITFKDQGLEVLKQETAVVENVPILGL-----YQIPAEGGGRIVLYGDSNLDDSHRQKDCFWLLDALLQ.................................................................................................................... 105
3 -4.650sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=ODZ2 PE=1 SV=3  ali   11  1............................PDFFHGGLYDPKLVHFTQRDYDVLAGRWTSPDYTMWKNVGKEPAPFNLYMFKSNNPLSSELDLKNYVTDV------------------KSWLVMFGFQLSNIIP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 93
4 -4.100sp|Q8IUI8|CRLF3_HUMAN Cytokine receptor-like factor 3 OS=Homo sapiens GN=CRLF3 PE=1 SV=2  ali   25  82..................VNGKEMTNQLPAVTSGSTVT-----FDIEAVTLGTTSNNEGGHFKLRVTISSNNREVVFD---------------WLLDQSCGSLYFGCSFFYPGWKVL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 160
5 -4.060tr|F8WAQ6|F8WAQ6_HUMAN Uncharacterized protein OS=Homo sapiens GN=ASCC2 PE=4 SV=1  ali   11  6..................LDQLQITHKDPKT--GKLRTSPALETSLHSSQVTTVTWMKPCLPSFRSSAISSSTVVCKGTG---PIPHPRS...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 72
6 -3.920sp|Q5T4D3|TMTC4_HUMAN Transmembrane and TPR repeat-containing protein 4 OS=Homo sapiens GN=TMTC4 PE=1 SV=2  ali   23  33..............................CFARSYDGDFVFDDSEAIVNNKDLQAETPLGDLWH------------HDFWGSRLSSNTSHKSYRPLTVLTFRI--------NYYLSGGFHPVGFHVV................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 110
7 -3.900sp|Q8IYR0|CF165_HUMAN UPF0704 protein C6orf165 OS=Homo sapiens GN=C6orf165 PE=2 SV=2  ali   13  2...........................................................................................................................................................................................................................................................................................PPTQAESVIRSIIREIGQECAAHGEIVSETL----------IAFMVKAVVLDPSNGFNMDRTLMKSDVQNLVKLCMTR-----LLDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELESLYRKGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQLKELTMIVTGIRL------------FNR-----DCGKGGEGIDDL.............................................................................................................................. 211
8 -3.870sp|Q4G0N4|NAKD1_HUMAN NAD kinase domain-containing protein 1 OS=Homo sapiens GN=NADKD1 PE=1 SV=2  ali   9  17AKRQGNLSLPLNRELVEKVTN-ESLLYSPE-------EPKILFSIREPIANRVSSRQRCFSSKVCVRMVVDGGTSFFNDGAIASMMINKEDELRTVLL.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 119
9 -3.760sp|Q8N187|AL2S8_HUMAN Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 protein OS=Homo sapiens GN=ALS2CR8 PE=2 SV=2  ali   13  8.............................DSSFGQNDSPTVLPITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQ.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 86
10 -3.740sp|P42694|HELZ_HUMAN Probable helicase with zinc finger domain OS=Homo sapiens GN=HELZ PE=1 SV=2  ali   13  31GPHPNLGKSPSPVQRIDPHTGTS-ILYVPAVYGGNVVMSVPLPVPWTGYQGAVDPRIITHQAAMAYNMN------LQTHGRGSPI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 111
FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 2 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Functional differentiation of proteins: implications for structural genomics. Structure. 2007 Apr;15(4):405-15.