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Query: gi|30260207|ref|NP_842584.1| hypothetical protein (BA_0013) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTAHISGDWRTRYQHVTSFYFKTNHKVWCKDIMSLLHTHIPMIIFIDMKGVNMDLIIQTFPLDGKTLYYVQCPVCKNNRILNSGANVSRIISDDTFRKLCGCTCDVKQTATKVEAPKKVKKEAVKKEAAPKRTGKVLTAVINGKEMTVKEIAEAYDISTSTVRQRINAGKSESEIIAPTKKKLast
1 -5.800sp|Q86UA6|RIP_HUMAN RPA-interacting protein OS=Homo sapiens GN=RPAIN PE=1 SV=1  ali   15  75......................................................................LICPVCTKYNLRITSGVVV-------------CQCGLSIPSHSSELTEQKLRACLEGSINEHSAH................................................ 126
2 -5.260sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2  ali   33  8...........................................................TVATTGPSVYYSQSPAYNSQYLLRPAANVT.............................................................................................. 37
3 -5.040sp|Q9H175|CSRN2_HUMAN Cysteine/serine-rich nuclear protein 2 OS=Homo sapiens GN=CSRNP2 PE=2 SV=1  ali   18  1...................................................................YFFLQPLPTKRRRALLRASGVHRIDAEELSREECGCDCRLYCDPEACACSQAGIKCQVDRMSFPCGCSRDGCGNMAGRIEFNPIRVRTHYLHT....................... 101
4 -4.930sp|Q71F56|MD13L_HUMAN Mediator of RNA polymerase II transcription subunit 13-like OS=Homo sapiens GN=MED13L PE=1 SV=1  ali   21  1...............................................EAHSLYVTLILSDSVMN-KDRNFDSCCICACNMNIK-GADVGLYIPDSSNEDQYRCTCGFSAIMNR----KLGYNSGLFLEDELDIFGK............................................... 85
5 -4.820sp|O14607|UTY_HUMAN Histone demethylase UTY OS=Homo sapiens GN=UTY PE=1 SV=2  ali   15  3............................................................................................NDEPAHYCSICEVEVFNLLFVTNESNTQKTYIVHCHDCARKTSKSLENFVVLEQYKMEDLIQVYD.......................... 67
6 -4.700tr|E9PDH4|E9PDH4_HUMAN Uncharacterized protein OS=Homo sapiens GN=PIKFYVE PE=4 SV=1  ali   12  21..............IFLERYCFRPSYQCPSMFCDTPMVHHIRRFVH---GQGCVQIILKELD-QHTILTYSWCRICKQVTPVVALSNESWSMSFAKYLELRFYGHQYTRRANAEPCGHSIHHDYHQYFSYNQMVASFSYSPIRLLEVCVKDFFQKVSQVYVAIDERLASLKTDT......... 203
7 -4.610sp|Q9UHV7|MED13_HUMAN Mediator of RNA polymerase II transcription subunit 13 OS=Homo sapiens GN=MED13 PE=1 SV=3  ali   21  2.................................................HSLYVNLILSESVMN-KDCNFDSCCICVCNMNIK-GADVGVYIPDPTQEAQYRCTCGFSAVMNR----KFGNNSGLFLEDELDIIGR............................................... 84
8 -4.590sp|Q6ZRI6|CO039_HUMAN Uncharacterized protein C15orf39 OS=Homo sapiens GN=C15orf39 PE=1 SV=3  ali   15  4....................HFTGLHASLCDAISGSVAHSPPEKL-AGPWGQAAWQDCQGVQLLSQLQRFDRTHRCPFPHVVRAGA--IHLVKERLFPRLPPASVDHVLQEHRVELPTTLSEERALRELALPGCTSRMLKL-----LALRQLPDIY........................... 147
9 -4.500sp|O15054|KDM6B_HUMAN Lysine-specific demethylase 6B OS=Homo sapiens GN=KDM6B PE=1 SV=4  ali   21  7......................................................................................................CDVEVFNILFVTSENGSRNTYLVHCEGCARRRSAGLQGVVVLEQYRTEELAQAYD.......................... 61
10 -4.490sp|Q9Y2I7|FYV1_HUMAN 1-phosphatidylinositol-3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3  ali   11  21..............IFLERYCFRPSYQCPSMFCDTPMVHHIRRFVH---GQGCVQIILKELDYQHTILTYSWCRICKQVTPVVALSNESWSMSFAKYLELRFYGHQYTRRANAEPCGHSIHHDYHQYFSYNQMVASFSYSPIRLLEVCVPLPKIFIKRQAPL..................... 170

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 0 5 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24