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current user: public |
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Query: gi|30260211|ref|NP_842588.1|(removed signalp:1-24) hypothetical protein (BA_0017) [Bacillus anthracis str. Ames], from B.anthracis |
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# | Score | Template | Links and tools | %id | First | IPCVVNGNKCTLFVMKGLCYGT | Last |
1 | -3.310 | sp|Q9C0C7|AMRA1_HUMAN Activating molecule in BECN1-regulated autophagy protein 1 OS=Homo sapiens GN=AMBRA1 PE=1 SV=2 | ali | 33 | 6 | ....INSARWLPEPGLGLAYGT | 23 |
2 | -2.730 | tr|Q49A14|Q49A14_HUMAN CCDC108 protein OS=Homo sapiens GN=CCDC108 PE=2 SV=1 | ali | 13 | 19 | VACLIHHQDPLFLDLMGTCHSD | 40 |
3 | -2.730 | sp|Q8WV15|FA70B_HUMAN Protein FAM70B OS=Homo sapiens GN=FAM70B PE=1 SV=1 | ali | 35 | 33 | VTCHSLDGKCQLKVRSNTCY.. | 52 |
4 | -2.440 | tr|F5GYW2|F5GYW2_HUMAN Uncharacterized protein OS=Homo sapiens GN=AACS PE=4 SV=1 | ali | 25 | 8 | TLYTLNGKKVEVAVKQ...... | 23 |
5 | -2.180 | sp|Q9NZJ4|SACS_HUMAN Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2 | ali | 23 | 1 | VPCIFSGDQIGML......... | 13 |
6 | -2.030 | sp|Q9Y6X4|F169A_HUMAN Protein FAM169A OS=Homo sapiens GN=FAM169A PE=1 SV=2 | ali | 25 | 111 | ......GERVVLYVLNRIIYRK | 126 |
7 | -1.980 | sp|Q8IZ02|LRC34_HUMAN Leucine-rich repeat-containing protein 34 OS=Homo sapiens GN=LRRC34 PE=2 SV=2 | ali | 41 | 8 | .PFVVDGRVYLAEVSNGL.... | 24 |
8 | -1.940 | sp|Q96JM4|LRIQ1_HUMAN Leucine-rich repeat and IQ domain-containing protein 1 OS=Homo sapiens GN=LRRIQ1 PE=2 SV=3 | ali | 38 | 33 | .PDVLNGGRVQLVA........ | 45 |
9 | -1.850 | sp|Q8WZ75|ROBO4_HUMAN Roundabout homolog 4 OS=Homo sapiens GN=ROBO4 PE=1 SV=1 | ali | 5 | 5 | ....AHFARALAVAVDSFGFG. | 21 |
10 | -1.840 | sp|O14841|OPLA_HUMAN 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3 | ali | 31 | 29 | .PCLIIDSNSTILVEPG..... | 44 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24 |