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Query: gi|30260213|ref|NP_842590.1| DNA polymerase III subunits gamma and tau (BA_0019) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKVSHAYLFSGPRGTGKTTIAKVFAKAINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVDEIRDIRDKVKYAPSAVEYKVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPHKIPPTIISRCQRFEFRKISVNDIVERLSTVVTNEGTQVEDEALQIVARAAEGGMRDALSLIDQAISYSDERVTTEDVLAVTGSVSQQYLGNLVECIRENDVSRALRIIDEMMGKGKDPVRFMEDFIYYYRDMLLYQTSPQLEHMLERVMVDEQFRMLSEEMQPEVIYEIIHTLSKGQQEMKWTNHPRIFLEVVMVQLCQQFMMQANGADRLQAIMNRMQQLEKELEQVKKNGVPVGVQQEVKETRAAPKPVRTGSMKIPVGRVNEVLKQAKRQDLEQLKAVWGELLGRLKAYNKVAFAVLLENSEPVAASDDTYVLAFQYEIHCKMASENREAMDTVEQALFELLSKKLNMIAIPKSEWGKIREDFLKREGGSSEESPEKKEDPLIEEAIKLVGQELIEIKELast
1 -5.040sp|Q86UW7|CAPS2_HUMAN Calcium-dependent secretion activator 2 OS=Homo sapiens GN=CADPS2 PE=1 SV=2  ali   17  2......................................................................................................................RFQAFLNGETQIVADEAFCNAVRSYYE-----VFL----KSDRVARMVQS-CSANDFREVFKKNIEKRVRSLPEIDGLSKETVLSSWIAK.................................................................................................................................................................................................................................................................................................................................................................. 83
2 -4.890sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2  ali   10  2..YRGGKVSWWNFYFSSENYSEKLKDLIHCWAESPKPIFAKIINHHPGCGGTTLAMHVLWDLK-----KNFRC--------------AVLKNKTTDFAEIAEQVINLVTYRAKSHQDYIPVLLLVDDFE--EQENVYFLQNAIHS-------LAEKDLRYEKTLVIILNCMRSR----NPDESAKLADSIALNYQLS............................................................................................................................................................................................................................................................................................................................................................................. 176
3 -4.600sp|Q68BL8|OLM2B_HUMAN Olfactomedin-like protein 2B OS=Homo sapiens GN=OLFML2B PE=2 SV=2  ali   14  18...............NEADNQENVLSQL--------------------LGDYDKVKAMSEGSDCQCKCVVRPLGR-DACQRINAGAS-DFYTVETITSGSSCKCACVAPPSALNPCEGDFRLQKLRE-----ADSQDLKLSTIIDMLEGAFYGLDLLKLHSVTTKLVGRVDK...................................................................................................................................................................................................................................................................................................................................................................................................... 150
4 -4.560sp|Q504Y0|S39AC_HUMAN Zinc transporter ZIP12 OS=Homo sapiens GN=SLC39A12 PE=2 SV=3  ali   9  15...................................................RSLIKTLLEKTGCPRNGMQGDCNLC-----FEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNMSNKEYKFYLHSLLSLRQDEDS----LSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSENESTLPQLAAMIITLSLQGVCLGQGNLTEYIFSSRTNTLRLSELDQLLNTLWTR........................................................................................................................................................................................................................................................................................................................... 215
5 -4.530sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1  ali   14  38..LQLLLKEWQPKLVISVHGHPRIKQLLGKGLKAAVTTGAWILTGGVNTG---VAKHVGDALKEHASRSSRKI----CTIGIAPWGVIENRNDLVGRDVVAPYQTLLNPLSKLNVLNNLHSHFIVDDGTVGKYGAEVRLRRELEK-PVVALIF-YLQESPPVPVVVCE--KTFNFGQNEALHLFQTLMECMKRKELDIDVAILTALLKGTNASAFDQLIL---TLAWDRVDIAKNHVFVYGQQWLVGSLEQAMLDALVMDRVAFVKL---LIENGVSMHKFLT--IPRLEELYNTKQGPTNPMLFHLVRDVKQ-LPPGYKITLIDIGLVIEYLM.................................................................................................................................................................................................................................... 437
6 -4.330sp|Q9H175|CSRN2_HUMAN Cysteine/serine-rich nuclear protein 2 OS=Homo sapiens GN=CSRNP2 PE=2 SV=1  ali   11  3..FLQPLPTKRRRALLRASGVHRIDAEEKQELRAIRLSREECGCDCRLYCDPEACACSQAGIKCQVDRMSFPCGSRDGCGNMAGRIEFNPIRVRT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 96
7 -4.110sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3  ali   14  1..................................................................................................................PSLDYQGLYLLDLVPLLQHGQ-QSIFYTTT-----LLPFLNDDVLSTLPYTMISTLATF------PPFLHKDIIEYLSTSFLPMAILGSSRREGVPAHVNLSASSMLMIAMQYTSNPVYHCQLLECLMKYKQEVWKDLLYVIAYGPSQVKPPAVQMLFH................................................................................................................................................................................................................................................................................................. 157
8 -4.080sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3  ali   13  2......................................................AVVTCFSAGCCGRHGNRPVRYCKRCHSNHHSNEVGAAAETHLYQTSP-------PPINTRECGAEELVCAVEAV.................................................................................................................................................................................................................................................................................................................................................................................................................................................. 68
9 -4.070sp|Q9Y4A5|TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV=3  ali   10  28.........................................................................................LTDVNTPDETKLKMMQEVSENFENVTSSPQYSTFL--------EHIIPRFLTFLQDGEVQFLQEKPAQQLRKLVLEIIHRIPTNEHLRPHTKNVLSVMFRFLETENEENVLICLRIIIEPITQEIHHFLDFVKQIYKELPKVVN......................................................................................................................................................................................................................................................................................................................................... 170
10 -4.050sp|Q6P2Q9|PRP8_HUMAN Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2  ali   22  16......YQRWQ--TLPMMSTLYRLANQLLTDLVDDN--YFYLF--------DLKAFFTSKALN----------------MAIPGGPKFEPLVRDILQDEDWNEFNDINKIIIRQPIRTEYKIAF--------PYLYNNLPHHVHLTWYHTNVVFIKTEDPDLPA.............................................................................................................................................................................................................................................................................................................................................................................................................. 140
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.