current user: public

If you have questions about the server, please let us know.

Query: gi|30260200|ref|NP_842577.1| DNA gyrase subunit B (BA_0005) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640
# Score Template Links and tools%idFirst MEQKQMQENSYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEIVDNSIDEALAGYCDEINVSIEEDNSIRVTDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTELEVFVHREGKIHYQKYERGIPVADLKVIGDTDQTGTITRFKPDPEIFQETTVYEFDTLATRMRELAFLNRNIKLTIEDKREHKQKKEFHYEGGIKSYVEHLNRSKQPIHEEPVYVEGSKDGIQVEVSLQYNEGYTNNIYSFTNNIHTYEGGTHEVGFKTALTRVINDYGRKNSILKDADSNLTGEDVREGLTAIVSIKHPNPQFEGQTKTKLGNSEARTITESVFSEAFEKFLLENPNVARKIVEKGTMAARARVAAKKARELTRRKSALEVSSLPGKLADCSSKDPAISEIYIVEGDSAGGSAKQGRDRHFQAILPLKGKIINVEKARLDKILSNDEVRTIITAIGTNIGGDFDIEKARYHKVIIMTDADVDGAHIRTLLLTFFYRYMRQIIEHGYIYIAQPPLFKVQQGKKIQYAYNEKELEKILAELPAQPKPGIQRYKGLGEMNPTQLWETTMDPEVRSLLQVSLQDAIEADETFEILMGDKVEPRRNFIQENAKYVKNLDILast
1 -179.0004juo_C mol:protein length:670 DNA topoisomerase 4 subunit B  ali model follow..  52  14MSKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHA-MGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKAPKSKTGTKVTFMPDATIFSTTDF-KYNTISERLNESAFLLKNVTLSLTDKRTD-EAIEFHYENGVQDFVSYLNEDKEILTP-VLYFEGEDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEKDKNLEGSDYREGLAAVLSILVEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESRKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTEEATV 659
2 -143.0004gfh_A mol:protein length:1177 DNA topoisomerase 2  ali model follow..  23  2.....STEPVSASDKYQKISQLEHILKRPDTYIGSVEVPGLFKIFDEILVNAADNKVRDPSKRIDVNIHEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETLNVGQKYVQKWENNMSICHPPKITSYKPSYTKVTFKPDLTRFGMKEL-DNDILGVMRRRVYDINGSVRD-INVYLNGKSLKIRNFKNYVELYLKSLEKKRQLDNGDIPTILYERINNRWEVAFAVSDIS-FQQISFVNSIATTMGGTHVNYITDQIVKKISEILK-----KKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLEYI-----NKIMKTDLATRMFEIADANEENALKKSDGTRKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLARDYYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQHRKKYDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFPGLLDQGFLLEFITPIIKVSITKPTKNFYNMPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDK-DYIDLAFSKKKADDRKEWLRQYEP....... 659
3 -132.0004i3h_A mol:protein length:1144 Topoisomerase IV subunit B, DNA topoisomerase 4 subunit A chimera  ali model follow..  53  1MSKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHAM-GIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGKPVTTLKKIGTASKTGTKVTFMPDATIFSTTD-FKYNTISERLNESAFLLKNVTLSLTDKRTDEA-IEFHYENGVQDFVSYLNEDKEILTP-VLYFEGEDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEKDKNLEGSDYREGLAAVLSILVPEEQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESRKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKYAWTDGELEELRKQF--GKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLE... 642
4 -114.0003zm7_A mol:protein length:442 DNA GYRASE SUBUNIT B  ali model follow..  49  11.AQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHAS-GIPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAP-TKKTGSTVRFWADPAVFETTE-YDFETVARRLQEMAFLNKGLTINLTDERVTQDSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELVR................................................................................................................................................................................................................................................. 436
5 -113.0001kij_A mol:protein length:390 DNA GYRASE SUBUNIT B  ali model follow..  48  2.........SYDASAIRVLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALAGYATEILVRLNEDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQGAYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFSRGEVTEPLRVVGERGKTGTRVTFKPDPEIFGNLR-FDPSKIRARLREVAYLVAGLKLVFQDRQ-HGKEEVFLDKGGVASFAKALAEGEDLLYEKPFLIRGTHGEVEVEVGFLHTQGYNAEILTYANMIPTRDGGTHLTAFKSAYSRALNQYAKKAGLNKEKGPQPTGDDLLEGLYAVVSVKLPNPQFEGQTKGKLLNPEAGTAVGQVVYERLLEILEENPRIAKAVYEKALRAAQAREAARKARELV.................................................................................................................................................................................................................................................. 390
6 -113.0003zkb_A mol:protein length:432 DNA GYRASE SUBUNIT B  ali model follow..  49  8.AQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGYATTVNVVLLEDGGVEVADDGRGIPVATHASG-IPTVDVVMTQLHAGGKFDSDAYAISGGLHGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQG-APTKKTGSTVRFWADPAVFETTE-YDFETVARRLQEMAFLNKGLTINLTDERVTVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAMQWNAGYSESVHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISVKVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAARKARELV.................................................................................................................................................................................................................................................. 432
7 -112.0004prv_A mol:protein length:398 GyrB  ali model follow..  56  2.......SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKR-DGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT.................................................................................................................................................................................................................................................. 392
8 -111.0004url_A mol:protein length:406 DNA TOPOISOMERASE IV, B SUBUNIT  ali model follow..  53  2...AMNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNSVDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHK-SGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGNIYHQSFKNGGSPSSGLVKGKTKKTGTKVTFKPDDTIFKASTSFNFDVLSERLQESAFLLKNLKITLNDLRSGKRQEHYHYEEGIKEFVSYVNEGKEVLHDVA-TFSGEANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDYARRINELKTKDKNLDGNDIREGLTAVVSVRIELLQFEGQTKSKLGTSEARSAVDSVVADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARSGKKNK........................................................................................................................................................................................................................................... 405
9 -109.0005j5p_A mol:protein length:409 DNA topoisomerase 4 subunit B  ali model follow..  51  2MSKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHA-MGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKAPKSKTGTKVTFMPDATIFSTTD-FKYNTISERLNESAFLLKNVTLSLTDKR-TDEAIEFHYENGVQDFVSYLNEDKEILTPVL-YFEGEDNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLLKEKDKNLEGSDYREGLAAVLSILVEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESRN................................................................................................................................................................................................................................................ 402
10 -108.0003lnu_A mol:protein length:408 Topoisomerase IV subunit B  ali model follow..  33  8LVPRGSHNTRYNAADIEVLSGLDPVKRRPGMYTDTA---RPNHLAQEVIDNSVDEALAGHAKQIEVTLYKDGSCEVSDDGRGMPVDIHPEEKIPGVELILTRLHAGGKFNNRNYTFSGGLHGVGVSVVNALSTKVELFIKREGSEHRMEFRDGNAASKLEVVGTKKNTGTRLRFWADPKYFDTPK-FNVRALRHLLRAKAVLCPGLTVKLHDEA-TGEQDSWYFENGLRDYLKGEMAEHEMLPADLFVGSLKKDTEIVDWAAGWVPEGELVQESYVNLIPTAQHGTHVNGLRSGLTDALREFCDFRN-LLPRGVKLAPEDVWDRVTFVLSLKMTDPQFSGQTKERLSSRQAAGFIEGAAHDAFSLYLNQNVEIGEKIAQIAIDRASAR--LKTEKQIVRKK............................................................................................................................................................................................................................................... 402
11 -108.0004hxz_A mol:protein length:390 Topoisomerase IV, subunit B  ali model follow..  36  2........QNYNAKSIEVLTGLDPVKKRPGMYTNIE---NPNHLIQEIIDNSVDEVLAGFASKINITLYEDNSIEVADDGRGMPVDIHPEHKMSGIELIMTKLHSGGKFSNKNYTHSGGLHGVGVSVVNALSTRLEAEIKRDGNVYHIVFEDGFKTKDLEIIDNVKNTGTKIRFWPNKKYFDDIK-VNFKALKNLLEAKAILCKALTIKYSNEI-KKEKLTWHFETGLKGYLDHKLEAETLPAEPFIIDNFSNGDSYLDAVFCWCDPSESIKNSYVNLIPTPQDGTHVTGLKNGIYDAIKAYIEKNS-LSVKNIKITANDSFAQLNYVISVKITNPQFAGQTKEKLSNKDVTNFVATAVKDLLTIWLNQNPDEARQIVENISKVAQKRINADLE...................................................................................................................................................................................................................................................... 384
12 -107.0001s16_A mol:protein length:390 Topoisomerase IV subunit B  ali model follow..  35  2.......TQTYNADAIEVLTGLEPVRRRPGMYTDTT---RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCRNTGTSVHFWPDETFFDSPR-FSVSRLTHVLKAKAVLCPGVEITFKDEI-NNTEQRWCYQDGLNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPR-GVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRR--MRAAKKVVRKK............................................................................................................................................................................................................................................... 390
13 -99.0003ig0_A mol:protein length:242 DNA gyrase subunit B  ali model follow..  57  2...........................................................................................................................................................................................................................................................................................................................................................................................................................AVDDDDKTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV 236
14 -97.2002zjt_A mol:protein length:247 DNA gyrase subunit B  ali model follow..  57  1............................................................................................................................................................................................................................................................................................................................................................................................................................MTPYAFTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV 234
15 -97.0004z2c_C mol:protein length:269 DNA gyrase subunit B  ali model follow..  58  2...................................................................................................................................................................................................................................................................................................................................................................................................GSSGHIDDDDKHMKSGLEISNLPGKLADCSSNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQPPIYGVKVGSEIKEYIQPGADQEIKLQEEGRTKPTIQRYKGLGEMDDHQLWETTMDPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAV-YSTLDV 259
16 -96.3005bs8_B mol:protein length:253 DNA gyrase subunit B  ali model follow..  58  1.........................................................................................................................................................................................................................................................................................................................................................................................................SNALVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARRSFITRNAKDVRFLDV 253
17 -96.1003foe_C mol:protein length:268 DNA topoisomerase 4 subunit B  ali model follow..  51  2...................................................................................................................................................................................................................................................................................................................................................................................................GSSGHIDDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEATV 257
18 -94.3003cwv_A mol:protein length:369 DNA gyrase, B subunit, truncated  ali model follow..  24  2...........SLGMHLPGGIVENVRKRPGMYCGDVGEYGLHHLVYFLLDVAYEEARRGECRDVVLEVGGDGSIALFCTSRTVTAENL------------VRVATGAGFLGRPPGDGWG-WDSMLVVSLALSSRYQVDIWADGRQWRVMGEHGHPQGEGAAVPVSAERGVRVHFVPDATIFEVLA-FDRARLSRRCNELAALAPGLRVSFADLQRGER-TLWHLPGGVAQWAHVLTEARPQLHPEPVVFDFTWDGLRVQCALQWCEDEDSTLLSFANAVRTVRHGAHVKGVTQALRGALAKLS------GETRGAFPWARVAQGLTAIVAVSGRQMAFAGPTKELLAIPGLEEAIRKQLQPLFIELLREHPVTPALLARRTSGSE............................................................................................................................................................................................................................................................... 362
19 -94.0001pvg_A mol:protein length:418 DNA topoisomerase II  ali model follow..  21  3.MVTMSTEPVSASDKYQKISQLEHILKRPDTYIGSVEVPGLFKIFDEILVNAADNKVRPSMKRIDVNIHEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVKYVQKWENNMSICHPPKITKKGPSYTKVTFKPDLTRFGMKEL-DNDILGVMRRRVYDINGSVRDINVYL-NGKSLKIRNFKNYVELYLKSLEKKRQLDNGEIPTILYERINNRWEVAFAVSDIS-FQQISFVNSIATTMGGTHVNYITDQIVKKISEILKKKK-----KKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKIMKTD-----LATRMFEIADANEENALK...................................................................................................................................................................................................................................................... 418
20 -93.4004urm_A mol:protein length:231 DNA GYRASE SUBUNIT B  ali model follow..  68  5.LSDVNNTDNYGAGQIQVLEGLEAARKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERDEENVREDSY................................................................................................................................................................................................................................................................................................................................................................................................................................ 227
21 -93.4001zxm_A mol:protein length:400 DNA topoisomerase II, alpha isozyme  ali model follow..  21  1..........SVERIYQKKTQLEHILLRPDTYIGSTFVPGLYKIFDEILVNAADNKQRDPKMSCIRVTPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTNMGRAGEMELKPFNGEDYTCITFQPDLSKFKMQSLDKDALMVRRAYDIAGSTKDVKVFLNGNK--------LPVKGFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKG-FQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKK---NKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCQLSEKFIKAAIGCG-----IVESILNWVKFKAQVQLNKKCS.................................................................................................................................................................................................................................................. 400
22 -85.6004gee_A mol:protein length:215 DNA gyrase subunit B  ali model follow..  70  1....................GLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSIDEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRGAVVDDLKVIEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLNRGLHISIEDRREGQEDKKEYHYEGLE........................................................................................................................................................................................................................................................................................................................................................................................................................... 209
23 -80.8005cph_A mol:protein length:212 DNA gyrase subunit B  ali model follow..  60  6.LSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEALAGYANQIEVVIEKDNWIKVTDNGRGIPVDIQEK-----------------------MGRPAVEVILTSSVVNALSQDLEVYVHRNETIYHQAYKKGVPQFDLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIRELAFLNKGIQITLRDERDEENEDSYHYEGGIK........................................................................................................................................................................................................................................................................................................................................................................................................................... 212
24 -80.3005mmn_A mol:protein length:234 DNA gyrase subunit B  ali model follow..  58  4.SGIDHMSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY................................................................................................................................................................................................................................................................................................................................................................................................................................. 226
25 -80.2004hyp_A mol:protein length:215 DNA gyrase subunit B  ali model follow..  60  2....................GLDAVRKRPGMYIGDTDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY................................................................................................................................................................................................................................................................................................................................................................................................................................. 205
26 -79.8005Z4O Entity 1(prereleased)  ali follow..  59  1...................GGLDAVRKRPGMYIGDTDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGG.............................................................................................................................................................................................................................................................................................................................................................................................................................. 208
27 -79.8003nuh_B mol:protein length:420 DNA gyrase subunit B  ali model follow..  63  1......................................................................................................................................................................................................................................................................................................................................................................................................SNAAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIASRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI 420
28 -79.2004bae_A mol:protein length:205 DNA GYRASE SUBUNIT B  ali model follow..  55  1.................MLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVEMHAT-GMPTIDVVMTQLHAGGKFDGETYAVSGGLHGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPG-KLKQGGETKETGTTIRFWADPEIFETTD-YNFETVARRLQEMAFLNKGLTIELTDERDGKHRVFHY................................................................................................................................................................................................................................................................................................................................................................................................................................. 203
29 -76.5004hz0_A mol:protein length:213 DNA topoisomerase 4 subunit B  ali model follow..  43  1.................VLTGLEPVRRRPGMYTDTT---RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKTGTSVHFWPDETFFDSPR-FSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCY................................................................................................................................................................................................................................................................................................................................................................................................................................. 204
30 -76.5004hz5_A mol:protein length:216 DNA topoisomerase IV, B subunit  ali model follow..  54  2....................GLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNAVDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHAS-GIPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVVNALSKWLEVHIVRDGVEYMERFEDGGKPVGTLKKITKKRNGTSVTFLPDDTIFSTTN-FSYEILAERLRESAFLLKGVKITLTDERGEEPKEEVFHYEELE........................................................................................................................................................................................................................................................................................................................................................................................................................... 210
31 -73.8004b6c_A mol:protein length:196 DNA GYRASE SUBUNIT B  ali model follow..  50  2.......PKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAGFATRVDVKIHADGSVEVRDDGRGIPVEMHATGM---------------------PTIDVVMTQVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPG-KLKQGGETKETGTTIRFWADPEIFETTD-YNFETVARRLQEMAFLNKGLTIELTDERDGKH-RVFHYPG.............................................................................................................................................................................................................................................................................................................................................................................................................................. 196
32 -70.3001s14_A mol:protein length:194 Topoisomerase IV subunit B  ali model follow..  38  2.......TQTYNADAIEVLTGLEPVRRRPGMYTDTT---RPNHLGQEVIDNSVDEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVE-----------------------LILCISVVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCRNTGTSVHFWPDETFFDSPR-FSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQD............................................................................................................................................................................................................................................................................................................................................................................................................................... 194
33 -63.0002xkj_E mol:protein length:767 TOPOISOMERASE IV  ali model follow..  43  4...............................................................................................................................................................................................................................................................................................................................................................................................AISKAGRRLKAAKKVERKKIVSGPALPGKLADCVGQTREESELFIVEGDSAGGSAKQARDKNFQAIMPIRGKILNTWEVSSDEVLASQEVHDIAIAIGVDPGSD-DLSELRYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYVAMPPLFRIDIGKDVHYALDDEELETILKNVKGNKNPQITRFKGLGEMNAIQLRETTMDPNTRRLVQLDLDDAHLTAGLLDKLLAKKAADRKQWLEQKGNLAD.... 256
34 -58.8005eix_A mol:protein length:741 DNA topoisomerase 4 subunit B,DNA topoisomerase 4 subunit A  ali model follow..  46  2................................................................................................................................................................................................................................................................................................................................................................................................................KKLTSGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGIDPDSD-DLSQLRYGKICILADADSDGLHIATLLCALFVRHFRTLVKEGHVYVALPPLYRIDLGKEVYYALTEEEKTGVLEQLKRKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLLVISDEDEQQTTAIMDMLLAKKSEDRRNWLQEKGDMAD.... 240
35 -56.1005gwk_A mol:protein length:806 DNA topoisomerase 2-alpha  ali model follow..  23  13...............................................................................................................................................................................................................................................................................................................................................................................................ADDDDKVPDPTSVDAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYSLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLRHRFLEEFITPIVKVSKNKQEMAFYSLPEFEEWKSSTPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRFKYSGPEDDAAISLAFS---KKQIDDRKEWLTNFMEDRRQ... 272
36 -55.8003qx3_A mol:protein length:803 DNA topoisomerase 2-beta  ali model follow..  24  13...............................................................................................................................................................................................................................................................................................................................................................................................ADDDDKVPDPTSVDSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYSLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRFRYAGPEDDAAITLAFS---KKKIDDRKEWLTNFMEDRR.... 271
37 -52.1002xco_A mol:protein length:726 DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A  ali model follow..  70  1...................................................................................................................................................................................................................................................................................................................................................................................................................MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQGKQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYAN.... 233
38 -50.1001bgw_A mol:protein length:793 TOPOISOMERASE  ali model follow..  24  1.....................................................................................................................................................................................................................................................................................................................................................................................................ENALKKSDGTRKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQHRKKYDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFLGLLDQGFLLEFITPIIKVKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKHSLQGNDKDYIDLAFS---KKKADDRKEWLRQYEPG...... 252
39 -40.5002xcs_B mol:protein length:692 DNA GYRASE SUBUNIT B, DNA GYRASE SUBUNIT A  ali model follow..  75  1...................................................................................................................................................................................................................................................................................................................................................................................................................MDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPT----------------------------------GYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQ.............. 189
40 -16.1002q2e_B mol:protein length:621 Type 2 DNA topoisomerase 6 subunit B  ali model follow..  13  10............AKKQKSISVAEFFEKNRQILGFDSAPRSLITTVKEAVDNALD-EEAGILPDILVQVERTGTVIIEDNGPGIVREQIPK--------VFAKLLYGSRF--HALKQSRGQQGIGISAAVLYARHTKILSKTSPTAPAHYYTNEPDILVDEVRDWFRPHGTQIELEMRAAYVKGRR----QSIYEYLKATAIVNPHARITLIDPDGNHYTERQKLAPFLRYSFCKIGLLTAEEICKAAGLDPEIDPHAVEVGMAYPKEEKISIMRFANRVPLL------QQGGCVTTHAVEDIKWKQYGLNQPGGGIP----VGPVILLIHVASINVPFTSESKDAIADIP-------VIKEEIDLAIKEVARKLKHYLSK-----QSNLKKRREKEIIITKVLPKLAAKVAHVLEKDVPDINPVVAKIMGNLLVHRVIKNNGDGTVDVAIKVKNFGTSAYSFRVHEMLPCKVSGAKPEPKVVTMGNDYSSKVLSYK---IESASEEELQKLPQLIVE........................................................................................................................... 605
41 -15.0002zbk_B mol:protein length:530 Type 2 DNA topoisomerase 6 subunit B  ali model follow..  13  1MSAKEKFTSLSPAEFFKRNPELAGF---------PNPARALYQTVRELIENSLD-DVHGILPNIKITIDLIDDVNVVDNGIGIPPQ--------EVPNAFGRVLYSSKYVNRQTR---GMYGLGVKAAVLYSQEIETSPVNSKRIYTFKLKIDINKNEPIIVERGSVEGTSVAIS-----IPGDWPKAKSRIYEYIKRTYIITPYAEFIFKDPEG-------------NVTYYPRLTNKIPKPPQEVKPHPYGVDREEIKILINNLKRDYTIKEFL-----------VNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKDEDFRSPSADSLSVIGEDLIELGLKKIFNPDFAASITRKPKAYQGH-------------------------------------------------FIVEAGVAFGGSIPVGEEPI------------LRYANKIPLIYDEKSDVIWKVVEELDWKRYGIESDQYQMVVMV--------HLCSTKIPYKSAGKESIAEVENIEKEIKNALMEVARKLKQYLSEKRKEQEAKKKLLAYLKYIPEVSRSLATFLASGISEGLFKLISKKLDLINIEEYRKVYRV............................ 527
42 -13.7001k58_A mol:protein length:123 Angiogenin  ali model follow..  16  1................EDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLHQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 121
43 -12.2004ahj_A mol:protein length:123 ANGIOGENIN  ali model follow..  16  1................QDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFVHGRSIKAICENKNGNPHRQNLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 121
44 -12.2001th8_A mol:protein length:145 Anti-sigma F factor  ali model follow..  19  40........................................IKTVVSEAVTNAIIHGYNNDPNIVSISVIIEDHLTVRDEGVGIPDIEEARQPLFTT------------------KPELERSGMGFTIMENFMDEVIVESEVNK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 128
45 -12.1003zxo_A mol:protein length:129 REDOX SENSOR HISTIDINE KINASE RESPONSE REGULATOR DEVS  ali model follow..  30  36................................VDSALADQAEAVVREAVSNAVRHAAASTLT-VRVKVDDDLCIEVTDNGRGMP---DEFTGSGLTNLRQRAEQAGGEFTLASMPGASG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 118
46 -11.9001un3_A mol:protein length:123 ANGIOGENIN  ali model follow..  16  1................EDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINDFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 121
47 -11.8004gt8_A mol:protein length:139 Sensor protein vraS  ali model follow..  14  14.........KDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNG---TKVTVELFNKDDLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLP------DSGTRI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 125
48 -11.7001l0o_A mol:protein length:150 Anti-sigma F factor  ali model follow..  19  40........................................IKTVVSEAVTNAIIHGYNNDPNIVSISVIIEDHLTVRDEGVGIPDIEEARQPLFTT------------------KPELERSGMGFTIMENFMDEVIVESEVNK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 128
49 -11.6005m9a_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---RYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGNSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
50 -11.6005m9c_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCRDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
51 -11.6001til_A mol:protein length:146 Anti-sigma F factor  ali model follow..  20  40........................................IKTVVSEAVTNAIIHGYNNDPNIVSISVIIEDHLTVRDEGVGIP-----------IEEARQPLFTTKPELERS--------GMGFTIMENFMDEVIVESEVNK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 128
52 -11.5005m9r_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGIRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
53 -11.4004aoh_A mol:protein length:124 ANGIOGENIN  ali model follow..  20  13.........................................QHYDAKPQGRDDRRGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
54 -11.4001h53_A mol:protein length:123 ANGIOGENIN  ali model follow..  19  12.........................................QHYDAKPQGRDDRRGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDGSIFRR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 122
55 -11.2001un4_A mol:protein length:123 ANGIOGENIN  ali model follow..  20  12.........................................QHYDAKPQGRDDRRGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTACKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 121
56 -11.2004p7a_A mol:protein length:348 DNA mismatch repair protein Mlh1  ali model follow..  13  2MSFVAGVIRRLDETVVNRIAAGE-VIQRPA------------NAIKEMIENCLDAK----STSIQVIVKEGGLIQIQDNGTGIRKE---------LDIVCERFTTSQSFEDLASISTYGFRGEALASISHVAHTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVE-IATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNISNANYSVKKCIFLLFINH.......................................................................................................................................................................................................................................................................................................................................................................... 265
57 -11.2005m9j_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENENGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
58 -11.2005m9s_A mol:protein length:124 Angiogenin  ali model follow..  16  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNIVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
59 -11.1005m9g_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIRAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
60 -11.1005m9q_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYQATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
61 -11.1005m9p_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFQVTSCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
62 -11.1001h7s_A mol:protein length:365 PMS1 PROTEIN HOMOLOG 2  ali model follow..  12  2..ERAESSSTEPAKAIKPIDRKSVHQICSGQVV-----LSLSTAVKELVENSLDAG----ATNIDLKLKDYGLIEVSDNGCGVEEE---------FEGLTLKHHTSQEFADLTQVETFGFRGEALSSLCALSD-VTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQ--HKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVDSECVDTPDKRQILLQEEKLLLA-VLKTSLIGMFDS............................................................................................................................................................................................................................................................................... 365
63 -10.8005x9y_C mol:protein length:308 DNA mismatch repair protein MutL  ali model follow..  19  11.......................EVIESPVD------------VVKELVENSLDAK----ATKVEVEIVKGGKIRVKDNGTGIHVLQGATSKIETEKDLMNI-------------STYGFRGEALYSISSVSKFKLRSRFFQEKEGKEIEVEAGNILGTRRVGMPVGTEVEVR-LPVRRKFLKKEDTERRKVLELIKEYALTNPEVEFTL.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 181
64 -10.8001id0_A mol:protein length:152 PHOQ HISTIDINE KINASE  ali model follow..  22  12................NLTSALNKVYQRKGVNISLDISPEIS--FVEVMGNVLDNACKYCLEFVEISARQTDEIVVEDDGPGIPLSKREV-----------IFDRGQRVDTL----RPG-QGVGLAVAREITE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 120
65 -10.7005ix1_A mol:protein length:451 MORC family CW-type zinc finger protein 3  ali model follow..  19  2...................TGIRLSALCPK-FLHTNSTSHPFSAVAELIDNAYDPD----VNAKQIWIDDHICLTFTDNGNGM-----------TADKLHKMLSFGFSDKVTMNGHVPGLYGNGFKSGSMLGKDAMVFTKNGETM............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 120
66 -10.7003cgy_A mol:protein length:157 Virulence sensor histidine kinase phoQ  ali model follow..  22  17................NLISALNKVYQRKGVNISMDISPEIS--FVEVMGNVLDNACKYCLEFVEISARQTDDIFVEDDGPGIPHSKRSL-----------VFDRGQRAD----TLRPG-QGVGLAVAREITE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 125
67 -10.6003zxq_A mol:protein length:124 HYPOXIA SENSOR HISTIDINE KINASE RESPONSE REGULATOR DOST  ali model follow..  25  32................................VDTVLANHAEAVLREAVSNAVRHANATSLA-INVSVEDDVRVEVVDDGVGIS---GDITESGLRNLRQRADDAGGEFTVENMPTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 113
68 -10.3005m9m_A mol:protein length:124 Angiogenin  ali model follow..  17  1...............MQDNSRYTHFLTQ---HYDAKPQGRDDRYCESIMRR---RGLTSPCKDINTFIHGRSIKAICENKNGNPHRENLRISKSSFPVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPVHLDQSIFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 122
69 -10.3003h4l_A mol:protein length:367 DNA mismatch repair protein PMS1  ali model follow..  19  2...........SMTQIHQINDIDVHRITSGQVI-----TDLTTAVKELVDNSIDAN----ANQIEIIFKDYGSIECSDNGDGIDPS---------YEFLALKHYTSAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKADKLEYDMVGHITSKTTTS--RNKGTTVLVS--QKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISS................................................................................................................................................................................................................................................................................................................................................................................................................... 219
70 -10.2005of9_A mol:protein length:606 MORC family CW-type zinc finger protein 2  ali model follow..  16  3............RMAFTNYSSLNRAQLTFE-YLHTNSTTHLFGALAELVDNARDAD----ATRIDIYAERREDLCFLDDGAGM-----------DPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMIGKDFILFTKKEDTM............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 128
71 -10.1004bxi_A mol:protein length:153 ACCESSORY GENE REGULATOR PROTEIN C  ali model follow..  13  21TAKILRAQEMNIPISIEIPDEVSSI---------NLNMIDLSRSIGIILDNAIEASTEIDDPIIRVAFIESENFIVMNKCADDIPRIH-------------------ELFQESFSTKGEGRGLGLSTLKEIADNA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 130
72 -9.9502q8f_A mol:protein length:407 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1  ali model follow..  15  244........................................LYHMVFELFKNAMRATMEHHANRIQVHVTLGNTVKMSDRGGGVPLRKIDR--------LFNYMYSTAPRETSRAVPLAGF-GYGLPISRLYAQYF......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 340
73 -9.9101ys3_A mol:protein length:150 Sensor-type histidine kinase prrB  ali model follow..  25  47............................................LRLAVDNAIANAVKGGATLVQLSAVSSRAIAIDDNGSGVPEGERQV--------VF------ERFSRGSTASHSGS-GLGLALVAQQAQ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 124
74 -9.8205akb_C mol:protein length:369 DNA MISMATCH REPAIR PROTEIN MUTL  ali model follow..  17  9VPRGSHMPIQVLPPQLANQIAAGEVVERPAS------------VVKELVENSLDAG----ATRIDIDIERGGAIRIRDNGSGIKLARHATSKIASLDDLEAI-------------ISLGFRGEALASISSVS-RLTLTSRTAEQQEAWQAYAEGRDMCVTVKPAAHPVGTTLEVLPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINL.............................................................................................................................................................................................................................................................................................................................................................................................................................................. 203
75 -9.5906blk_C mol:protein length:158 Signal transduction histidine-protein kinase/phosphatase mprB  ali model follow..  15  16.........DRSLERVRRRRSDIEFEVTVTPWQVIGDSSGLGRAVLNVLDNAAKWSPPGGRVGVRLYQIDPGELVITDQGPGIPPQERHL--------VFERF-----FRSASARSMPGS-GLGLAIVKQVVL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 127

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Li Z, and Godzik A. Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins Pacific Symposium on Biocomputing 11:439-450(2006) [PDF]