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Query: gi|30260213|ref|NP_842590.1| DNA polymerase III subunits gamma and tau (BA_0019) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKVSHAYLFSGPRGTGKTTIAKVFAKAINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVDEIRDIRDKVKYAPSAVEYKVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPHKIPPTIISRCQRFEFRKISVNDIVERLSTVVTNEGTQVEDEALQIVARAAEGGMRDALSLIDQAISYSDERVTTEDVLAVTGSVSQQYLGNLVECIRENDVSRALRIIDEMMGKGKDPVRFMEDFIYYYRDMLLYQTSPQLEHMLERVMVDEQFRMLSEEMQPEVIYEIIHTLSKGQQEMKWTNHPRIFLEVVMVQLCQQFMMQANGADRLQAIMNRMQQLEKELEQVKKNGVPVGVQQEVKETRAAPKPVRTGSMKIPVGRVNEVLKQAKRQDLEQLKAVWGELLGRLKAYNKVAFAVLLENSEPVAASDDTYVLAFQYEIHCKMASENREAMDTVEQALFELLSKKLNMIAIPKSEWGKIREDFLKREGGSSEESPEKKEDPLIEEAIKLVGQELIEIKELast
1 -109.0003glf_B mol:protein length:395 DNA polymerase III subunit tau  ali model follow..  41  17MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA-ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVP.............................................................................................................................................................................................. 387
2 -104.0001njf_A mol:protein length:250 DNA polymerase III subunit gamma  ali model follow..  54  8MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGT............................................................................................................................................................................................................................................................................................................................... 250
3 -72.2001sxj_C mol:protein length:340 Activator 1 40 kDa subunit  ali model follow..  20  10KENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYG-------------------KNYSNMVLELNASDDRGIDVVRNQIKDFASQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRAKGLALIDLIEGIVKILEDYELQNEETRVHLLTLADIEYSISKGGNDQIQGSAVIGAIKASFENETVKA............................................................................................................................................................................................................................. 338
4 -70.3001sxj_B mol:protein length:323 Activator 1 37 kDa subunit  ali model follow..  21  6SLQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH-MIISGMPGIGKTTSVHCLAHELLG-------------------RSYADGVLELNASDDRGIDVVRNQIKHFKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHG-LVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQIL--RTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKIGLTHMRILEGVGTYLQLASMLAKIHKLNNKA................................................................................................................................................................................................................................. 323
5 -70.2002gno_A mol:protein length:305 DNA polymerase III, gamma subunit-related protein  ali model follow..  21  1............................................GAKDQLETL-KRIIEKSEGISISYPREVSLELPEYVEKFPPKASDVLEIDPEGENGIDDIRTIKDFLNYSPELYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVEFRDLVKEKIGDLWEELPLLEDFKTALEAYKLGAEKLSG-LMESLKVLETEKLLKEGYLACRELLERFSKVESKEFFALFDQVTNTI-------------TGKDAFLLIQRLTRIILHENTWESVEDQKSVSLDSILRVKIANLNNKLTLMNILAIHRERKRGVN................................................................................................................................................................................................................................ 302
6 -69.9001sxj_D mol:protein length:353 Activator 1 41 kDa subunit  ali model follow..  21  22LAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTILALTKELYGP------------------DLMKSRILELNASDERGISIVREKVKNFARLTVSPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQ--------------------------ISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL.......................................................................................................................................................................................................... 353
7 -68.8001iqp_A mol:protein length:327 RFCS  ali model follow..  25  10VLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPH-LLFAGPPGVGKTTAALALARELFG-------------------ENWRHNFLELNASDERGINVIREVKEFARTKPIGGSFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAA-AALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLRELLKQGLSGEDVLVQMHKEVFNLPIEEPKK---------------------------VLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK....................................................................................................................................................................................................... 327
8 -68.3002chq_A mol:protein length:319 REPLICATION FACTOR C SMALL SUBUNIT  ali model follow..  22  3.NFEIWVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPH-LLFSGPPGTGKTATAIALARDLFG-------------------ENWRDNFIEMNASDERGIDVVRHIKEFARTAPIGGPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAI-GEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMEYGMSGEDIVAQLFREIISMPI---------------------------KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAKK....................................................................................................................................................................................................... 319
9 -65.1001a5t_A mol:protein length:334 DELTA PRIME  ali model follow..  19  2........RWYP--------LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWL-----SREVTMSQDALLAALRLSAGSPGAALALFQG----DNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHW-----------------LATLLMDALKRHHGAAQ---VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTNRELLITDLLLRIEHYLQPGVVLPVPH............................................................................................................................................................................................... 333
10 -59.0001sxj_E mol:protein length:354 Activator 1 40 kDa subunit  ali model follow..  18  1MS--LWVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLEKDILKRIAQASNGNLRVSLLMLESMALN--NELALKSSSPIIKPDWIIVIHKLTRKIVKNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTNKSS--------------------------IIEYSSVFDERLSLGNKAIFHLEGFIAKVMCC.......................................................................................................................................................................................................... 352
11 -58.5003u5z_B mol:protein length:324 DNA polymerase accessory protein 44  ali model follow..  17  11EKEHILEQKYRPSTIDECILPAFDKETFKSITSKGKIPHIILHSPSPGTGKTTVAKALCHDVNA------------------------DMMFVN-GSDCKIDFVRGLTNFASAASFDGRQKVIVIDEFDRSLAESQRHLRSFMEAYSSNCSIIITANNIDGIIKPLQSRCRVITFGQPTDEDMIRRLTEICKHEGIAIDMKVVAALVKKNFPDFRKTIGELDSYSSKG----VLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKY---AADYSWFVGKLAEEIYSRV----------------------------TPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLAC........................................................................................................................................................................................................... 319
12 -56.6003pvs_A mol:protein length:447 Replication-associated recombination protein A  ali model follow..  18  11NTFQPLAARMRPENLAQYIGQQHLLKPLPRAIEAGHL-HSMILWGPPGTGKTTLAEVIARYANAD-------------------------VERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPEGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARER................................................................................................................................................................................................................. 363
13 -50.0001hqc_A mol:protein length:324 RUVB  ali model follow..  18  1MED----LALRPKTLDEYIGQERLKQKLRVYLEAAKAREHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAA-----ILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQ------GPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVELEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFA--QVAGEEVITRERALEALAALGLDELGLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEP-----------------LIRQGLLKRTPRGRVPTELAYRHLGYPPPVGPLLE................................................................................................................................................................................................................... 323
14 -46.3003pfi_A mol:protein length:338 Holliday junction ATP-dependent DNA helicase ruvB  ali model follow..  17  14SFDETYETSLRPSNFDGYIGQESIKKNLNVFIARNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMIEKSGDLA---AILTNLSEGDILFIDEIHRLSPAIEEVLY-PAMEDYRLDIIIGSGPAA--------QTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMFRLEFYKDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALN--SLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIE............................................................................................................................................................................................................................................................................. 297
15 -46.2001in4_A mol:protein length:334 HOLLIDAY JUNCTION DNA HELICASE RUVB  ali model follow..  18  10TVYDSGVQFLRPKSLDEFIGQENVKKKLSLALERGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAA------ILTSLERGDVLFIDEIHRLNK----AVEELLYSAIEDFQIDIMIGKGPSA--KSIRIDIQPFTLVGATTRSGLLSSPLRSRFGILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTME--VLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEP....................................................................................................................................................................................................................................................................... 299
16 -45.0006blb_A mol:protein length:355 Holliday junction ATP-dependent DNA helicase RuvB  ali model follow..  17  18ERDEQLDRAIRPLKLADYIGQPSVREQMELFIHAARGRQEALIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLA------ALLTNLEAGDVLFVDEIHRLSPIVELYPAMEDFQLDIMIGEGPAA--------RSIKLDLPPFTLVGATTRAGMLTNPLRDRFIVQRLEFYNVEDLATIVSRSAGILGLEIEPQGAAEIAKRARGTPRIANRLLRRVRDFA--EVRGQGDITRVIADKALNLLDVDERGFDHLDRRLLLTMIDKFDGGPVGIDNLAAALSEERHTIEDVLEP-----------------LIQQGYIMRTPRGRVVTRHAYLHFGLNIPKRLGPGVTTDLFTS........................................................................................................................................................................................................... 351
17 -43.5005oaf_B mol:protein length:463 RuvB-like 2  ali model follow..  21  28IRGLGLDDALEPQASQGMVGQLAARRAVLEMIREGKIARAVLIAGQPGTGKTAIAMGMAQALGPD--TPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGETSLRYAIQLITAASLVCGTEVQVDDIKRVYSLFSTQYMKEYQDAFLFNELKGETMDTS..................................................................................................................................................................................................................................................................................................... 463
18 -43.0004wvy_B mol:protein length:513 RuvB-like 2  ali model follow..  14  172AKQGKLTIKTTDMEAIYDMGSKMIDAMTKERVMAGDIISIDKSSGKTKLGRSYARSRDYDAMGVDTKFLQCPEGELQKRKEVVHTVSLHEIDVEIRSEIRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGPHGLPLDFLDRVVIINTHPYTPDELRQILSIRAQEEEVDLTPDALALLTKIGEAGLRYASNLITTSQLIAAKQVGVEDVQRSFKLFSVRFVQESEKRLIGNDGVVDFSYQGAAEAAAPTLPAAAPVDPVGGEKMDMS........................................................................................................................................................................................................................................................................... 505
19 -42.5002xsz_D mol:protein length:378 RUVB-LIKE 2  ali model follow..  23  43IRGLGLDDALEPQASQGMVGQLAARRAAGVVLEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTVHTVSLHEIDVINSRTQGFLAEVREQINAKVAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGETSLRYAIQLITAASLVCGTEVQVDDIKRVYSLFSTQYMKEYQDAFLFNELKGETMDTS..................................................................................................................................................................................................................................................................................................... 378
20 -39.8003uk6_A mol:protein length:368 RuvB-like 2  ali model follow..  22  28IRGLGLDDALEPQASQGMVGQLAARRAAGVVLEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLIKAGAVHTVSLHEIDVINSRTQGFLAEVREQINAKKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGETSLRYAIQLITAASLVCRKRVQVDDIKRVYSLLDESRSTQYMKEYQDA-------LFNELKGETMDTS........................................................................................................................................................................................................................................................................................... 360
21 -39.4005fm6_A mol:protein length:464 RVB1  ali model follow..  16  184..QKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKV--VQKYINQGVAELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGRISLRYCLQLLAPASILARTQVDVQDIAEAEELLDARRSANILTSTGESGGLHGF......................................................................................................................................................................................................................................................................................................... 462
22 -37.7002xsz_A mol:protein length:367 RUVB-LIKE 1  ali model follow..  17  30KGLGLDESGLAKQAASGLVGQENAREACGVIVEKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMELHDLDVANARPGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGKTTLRYSVQLLTPANLLGKDSIEKEHVEEISELYDAKSSAKILADQQDK............................................................................................................................................................................................................................................................................................................... 358
23 -21.5003zh9_B mol:protein length:347 DELTA  ali model follow..  13  1.......................MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTV--------------------QETKDFNLSVFDLEE----DPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKVSALESYIQSPAPYTVFVLLAPERKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDRITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIKIMALISNQFRLILQTKYFAEASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGKDKQLLLELFLLQLLKRNEKND..................................................................................................................................................................................................... 344
24 -18.8002c9o_A mol:protein length:456 RUVB-LIKE 1  ali model follow..  20  33...........KQAASGLVGQENAREACGVIVEKKMAGRAVLLAGPPGTGKTALALAIAQELGSKEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDIGEINKVVNKYIDQGI-GVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGKTTLRYSVQLLTPANLLAKDSIEKEHVEEISELF---------------DAKSSAKILAD.................................................................................................................................................................................................................................................................................................... 449
25 -18.0001jqj_C mol:protein length:343 DNA polymerase III, delta subunit  ali model follow..  11  7.........................EQLRAQL-NEGLRAAYLLLGNDPLLLQESQDAVRQVAA-------------------QGFEEHHTFSIDPNT-----DWNAIFSLCQAMSLFASRQTLLLLLPEGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA-TALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAFDKHRVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKYGQSVWAELEGLSLLLCHKPLADV..................................................................................................................................................................................................... 339
26 -17.4005ujm_A mol:protein length:522 Origin recognition complex subunit 1  ali model follow..  14  152.ARLRLHVSAVP---ESLPCREQIYNFVESKLLDHTGGCMYI-SGVPGTGKTATVHEVIRCLQQAAQANDVP-----NGMKLTEPHQV-LQKLTGQKATANHAAELLAKQFCTRGSPQETTVLLVDELDILWTHKQDIMYNLFDWPKEARLVVLAIANTMDLPERIMMN-TRMCFQPYTYSQLQQILRSRLKHLKA-FEDDAIQLVARALSGDARRCLDICRRATEICEFSVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLRAILAEFRRSGLE-EATFQQIYSQHVALCVCSHLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALK....................................................................................................................................................................................................................................... 520
27 -15.9003syk_A mol:protein length:309 Protein CbbX  ali model follow..  20  31...............RELIGLKPVKDRIRETAALLLVERAMSFTGNPGTGKTTVALKMAGLLH------------------VRKGH---LVSVTRDDLVG-QYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYQEAIEILLQVMENNRDDLVVILAADRMENFFQSFRSR-HHIEFPDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGANARSIRNALDRARLRQANRLFTASSGPL.................................................................................................................................................................................................................................................................................................................................. 274
28 -14.7001ye8_A mol:protein length:178 Hypothetical UPF0334 kinase-like protein AQ_1292  ali model follow..  15  3........................................IIITGEPGVGKTTLVKKIVERLGKRAIRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLAVLIELTPENRDVILEDILSLLER................................................................................................................................................................................................................................................................................................................................................................................. 178
29 -14.6004fcv_A mol:protein length:311 Chaperone protein ClpB  ali model follow..  19  17...............KRVVGQDEAIRAVADAIRRARAG-SFLFLGPTGVGKTELAKTLAATL----------------------DTEEAMIRIDMTE--GYEEGGQLTEAVRRRP----YSVILFDAIEKAHPDVFNILLQMLDD---------RLTD---------SHGRTVDFRNIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF--RPLTKEQIRQIVEIQMSYLRARLAEKRISLELTE--AAKDFLAERGYDPVFGARPLRRVIQREL............................................................................................................................................................................................................................................................................. 275
30 -14.2004xgc_A mol:protein length:393 Origin recognition complex subunit 1  ali model follow..  14  26...EQLHVSVVP---KSLPCRERIYAFLEGKIQDQCGGCMYV-SGVPGTGKTATVTGVIRTLQRMAKQNELP-----NGMRLTEPRQA-YKQLTGKTVSWEQAHALLEKRFTTPAPRRVTTVLLVDELDILCNRRQDVVYNLLDWPSAAKLVVVTIANTMDLPERLLMG-TRLTFQPYSHKQLQEIVTARLGGSET-FKGEAVQLVARKVSGDARRALDICRRATEIADTAVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAIAAEVTRTGVE-ETTFMGVYQQVETIALCSKLGAERLIISEHSRNDLFQKILLNVSADDIHYALR....................................................................................................................................................................................................................................... 387
31 -14.0005kzf_A mol:protein length:513 Proteasome-associated ATPase  ali model follow..  15  154.............SYADIGGLSRQIEQIRDAVE--RPPKGVLLYGPPGCGKTLIAKAVANSLA----------KMAEVRGDDAHEAKSYFLNIKGPEGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFTTVVPQLLSEIDEGLENVIVIGASNREDMIDPAIL-RPGRLDVKERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIAMIEKVVDRMYAEIDDNVTYANGDKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVLETGQPGLRIQHLLDSIVDEFAENEDLPNTTNPDD................................................................................................................................................................................................................................................................... 473
32 -13.9004lj4_A mol:protein length:339 Chaperone protein ClpB  ali model follow..  19  43...............KRVVGQDEAIRAVADAIRRARAG-SFLFLGPTGVGKTELAKTLAATL----------------------DTEEAMIRIDMTE--GYEEGGQLTEAVRRRP----YSVILFDEIEKAHPDVFNILLQILDD---------RLTD---------SHGRTVDFRNILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF--RPLTKEQIRQIVEIQLSYLRARLAEKRISLELTE--AAKDFLAERGYDPVFGARPLRRVIQREL............................................................................................................................................................................................................................................................................. 301
33 -13.8006azy_A mol:protein length:885 Heat shock protein Hsp104  ali model follow..  22  572...............QHVVGQDEAIKAICDAIRLSRTG-SFLFLGPTGCGKTLCVKELAAFL-----------NDPGAIVRIDMSEYMEVSRLVGAP--GHDEGGQLTEAVRRRP----YTVVLFDEMEKAHKDVSNLLLQILDD---------HCTD---------SKGRRVDFKNVMTSNLGA--DLFELDEGDKVSQATKNAVLATARRHFAEFINMIDELIVF--NRLTPSNIRKIVDV----RLKEVQERLDEKQITLDVKAKDLLAQQGFDPVYGARPLNRLIQHALLTQLS........................................................................................................................................................................................................................................................................ 834
34 -13.7005kwa_A mol:protein length:497 Proteasome-associated ATPase  ali model follow..  15  145.............SYADIGGLSRQIEQIRDAVE--RPPKGVLLYGPPGCGKTLIAKAVANSLA----------KMAEVRGDDAHEAKSYFLNIKGPEGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTVVPQLLSEIDEGLENVIVIGASNREDMIDPAIL-RPGRLDVKERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIAMIEKVVDRMYAEIDDNVTYANGDKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVLETGQPGLRIQHLLDSIVDEFAENEDLPNTTNPD.................................................................................................................................................................................................................................................................... 463
35 -13.6004xgu_A mol:protein length:424 Putative pachytene checkpoint protein 2  ali model follow..  19  136..............WENLIYDSNLKNEVMSYVAA-NVNRLILLTGPPGTGKTSLCKGLAQHLSIR-----------------DKYSKSVMLEINSHSSESGKLVQKMFDQIDLAEDEKCMVFVLIDEVESLGMCAVNALLTQIDRRRDNVLILCTSNLESTLDKALVDRADIVKNVGQPSDFLKSSIMELARIGVVIDNEEILFKIAQEARGLSGRAISML..................................................................................................................................................................................................................................................................................................................................................... 390
36 -13.6005wc0_A mol:protein length:472 Meiotic spindle formation protein mei-1  ali model follow..  18  178VRGTMATNTENTMSLDDIIGMHDVKQVLHEAVT-RSPWKAMVLAGPPGTGKTLIARAIASESSST------------------------FFTVSSTDGDSEKIVRLLFELARYAPS-----IIFIDQIDTLSRRVKSEFLVQMDFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESL---AELVRNIDFEAALQAVSPSAGP................................................................................................................................................................................................................................................................................................ 456
37 -13.5001ofh_A mol:protein length:310 ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU  ali model follow..  16  2.......SEMTPREIVSIIGQADAKRAVAIALRNRWRRKNILMIGPTGVGKTEIARRLAKLAN------------------------APFIKVEATKFTEVGYVGKEVDSI--IDAVEQNGIVFIDEIDKICKKGEYSLLPLVEGSTVSTKHGMVKTD-GRLPIRVLSAADFERILTEPHASLTEQYKALMATEGVNIATDAVKKIAEAANIGARRLHTVMERLMDKISFSASDMNGQTV--NIDAAYVADALGEVVENE.............................................................................................................................................................................................................................................................................................................. 303
38 -13.5001fnn_A mol:protein length:389 CELL DIVISION CONTROL PROTEIN 6  ali model follow..  12  8...SVFSPSYVP---KRLPHREQQLQQLDILLGPGHHYPRATLLGRPGTGKTVTLRKLWELINGFIYRNFT-----AIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRE------RDLYMFLVLDDAFNLAPDILSTFIRLGQEADFRIALVIVGHNDNNLDPSTRGIMYVIRFSPYTKDQIFDILLDRAKAAEGSYSEDILQMIADITRGDARLAIDILYRSAYAAQKHIAPEDVRKSSKEVLFGISEEVLIGLPLHE-KLFLLAIVRSLKISHTPYITFGDAEESYKIVC--------EEYGERPRVHSQLWSYLNDLREKGIVET......................................................................................................................................................................................................................................... 350
39 -13.5003pxi_A mol:protein length:758 Negative regulator of genetic competence ClpC/MecB  ali model follow..  20  491...............SRVIGQDEAVVAVAKAVRRARAG-SFIFLGPTGVGKTELARALAESI----------------------GDEESMIRIDMSEYMEKHSTSQLTEKVRRKP----YSVVLLDAIEKAHPDVFNILLQVLED---------RLTD---------SKGRTVDFRNT--------ILIMTSNVGASEKDKVMGELKRAFR----EFINRIDEIIVF--HSLEKKHLTEIVSL----MSDQLTKRLKEQDLSIELAAKAKVAEEGVDLEYGARPLRRAIQKHV............................................................................................................................................................................................................................................................................. 721
40 -13.5003jco_H mol:protein length:467 26S protease regulatory subunit 7 homolog  ali model follow..  17  207.............TYSDVGGCKDQIEKLREVVE--DPPKGILLYGPPGTGKTLCARAVANRTDAT------------------------FIRVIGSEGEGARMVRELFEMAR-KAC-----IIFFDEIDAVGQRTMLELITQLDDPRGNIKVMFATNRPNTLDPALL-RPGRIDRKEFSLPDLEGRANIFIHSKSMSVERGIWELISRLCPNSTAELRSVCTEAIRARRKVATEKDFLKAVDKVISGYKKFSS..................................................................................................................................................................................................................................................................................................................... 459
41 -13.3005vjh_A mol:protein length:908 Heat shock protein 104  ali model follow..  16  578...............SEVVGQMDAIKAVSNAVRLSRSG-SFLFLGLSGSGKTELAKKVAGFL-----------NDEDMMIRVDCSELSEVSKLLGTT--GYDEGGFLTNQLQYKP----YSVLLFDEVEKAHPDVLTVMLQMLDD---------RITS---------GQGKTIDCSNIMTSNLGA--EFINSQQGSKIQESTKNLVMGAVRQHFREFLNRISSIVIF--NKLSRKAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEILNKLA........................................................................................................................................................................................................................................................................ 841
42 -13.3005x06_E mol:protein length:253 DnaA regulatory inactivator Hda  ali model follow..  15  32.............TFASFWDNSSLLAALQNVLRQEHSGYIYLW-AREGAGRSHLLHAACAELS-------------------QRGDAVGYVPLDKRTWFVPEVLDGMEH----------LSLVCIDNIECIAEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLASRLD-YKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASQRKLTIPFVKEILKL............................................................................................................................................................................................................................................................................................................................... 247
43 -13.2005udb_A mol:protein length:914 Origin recognition complex subunit 1  ali model follow..  11  436.KEEILKSANFQ---DYLPARENIYLSAYSAIESDSATTIYV-AGTPGVGKTLTVREVVKELLSSSAQREIP-----NGLKMVKPTDC---KVSGERLTWAASMESLEFYFRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTENAKLIVIAVANTMDLPERQLGN-TRIMFTGYTHEELKNRLKGLNDSFFYVMSADAIEIASRSVSGDARRALKVCKRAAEIAEKHVHITHVMKALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQ-EQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDFKQTMKNDRICCVKLNISVEEA............................................................................................................................................................................................................. 901
44 -13.1003bos_A mol:protein length:242 Putative DNA replication factor  ali model follow..  13  28............TSYYPAAGNDELIGALKSAASGDGVQAIYLW-GPVKSGRTHLIHAACARAN-------------------ELERRSFYIPLGIHASISTALLEGLEQ----------FDLICIDDVDAVAEEAIFDLYNRVAEQKRGSLIVSASASPMEAGFVLVSRMH-YQLQPMMDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASQRKLTIPFVKEMLRL............................................................................................................................................................................................................................................................................................................................... 242
45 -13.1001g8p_A mol:protein length:350 MAGNESIUM-CHELATASE 38 KDA SUBUNIT  ali model follow..  18  23..............FSAIVGQEDMKLALLLTAVDPGI-GGVLVFGDRGTGKSTAVRALAALLSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRALDIERAISKEKAFEPARANRGYLYIDECNLLEDHIVDLLLDVAQS-PARFV-LVGSGNPEETRVEVIRRRDTYD--RPKDMDIRNQILEARELPKVEAPNTALYDCAALC--GLRGELTLLRSARALAATAVGRDHLKRVATMA.............................................................................................................................................................................................................................................................................................................................. 322
46 -13.0001ksf_X mol:protein length:758 ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA  ali model follow..  19  458...............MLVFGQDKAIEALTEAIKMARAG-SFLFAGPTGVGKTEVTVQLSKAL------------------------GIELLRFDMSEYMGFDQGGLLTDAVIKHP----HAVLLLDEIEKAHPDVFNILLQVMDN--RKADFLVMTTN---AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPE-----------------------RNRLDNIIWF--DHLSTDVIHQVVDK----FIVELQVQLDQKGVSLEVEARNWLAEKGYDRAMGARPMARVIQDNL............................................................................................................................................................................................................................................................................. 712
47 -13.0003jco_L mol:protein length:437 26S protease subunit RPT4  ali model follow..  18  179.............TFDGIGGLTEQIRELREVIE--KPPKGVLLYGPPGTGKTLLAKAVAATIGA------------------------NFIFSPASGGESARIIREMFAYAK-EPC-----IIFMDEVDAIGGRTLMELLTQMDDNLGQTKIIMATNRPDTLDPALL-RPGRLDRKEIPLPNEAGRLEIFIHTAKVKKTGEFFEAAVKMSDGFNADIRNCATEAIRDDRDHINPDDLMKAVRKVAEVKKLEGT..................................................................................................................................................................................................................................................................................................................... 431
48 -12.8005vq9_D mol:protein length:432 Pachytene checkpoint protein 2 homolog  ali model follow..  13  135.............LWDSLVYDVEVKSHLLDYVMT-TWNRVVLLHGPPGTGKTSLCKALAQKLTIR-----------------SRYRYGQLIEINSHSSESGKLVTKMFQKIQLIDDKDALVFVLIDQVESLTAAVVNAVLTQIDKRHSNVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAYLSCLEELMKCQIIYPRQQLLTLRELEMIGFILLLNDISRKSEGLSGRVLRKLPFLAHA-TVTIEGFLQALSLAVDKQFEERKKLAAYI................................................................................................................................................................................................................................................................................................... 432
49 -12.8003jco_M mol:protein length:434 26S protease regulatory subunit 6A  ali model follow..  18  179.............TYSDVGGLDKQIEELVEAIV--RAPKGALMYGPPGTGKTLLARACAAQTNA-------------TFLKLAAPQLVQMYIGEGAKL-----VRDAFALAK-APT-----IIFIDELDAIGTKTMLELLNQLDSSDDRVKVLAATNRVDVLDPALL-RSGRLDRKEFPLPSEDSRAQILIHSRKMTTDDDIWQELARSTDEFNAQLKAVTVEALRNGQSSVKHEDFVEGISEVQARKSKSVS..................................................................................................................................................................................................................................................................................................................... 431
50 -12.8005eqt_A mol:protein length:257 Proteasome-activating nucleotidase  ali model follow..  22  3.............TYNDIGGLKKQLQELREAIEGIDPPKGVLLYGPPGCGKTLMAKALAHEVNAT--------------IRVVGSELVRKYIGEGARL-----VHELFELAK-APT-----IIFIDEIDAIGAKTLMQLLAEMDDPRGNVKVIAATNRPDILDPALL-RPGRFDRLEVPLPDFEGRLEILVHTRRMKLKGVDLRAIAEMTEGSGADLKAIATEAGMFARTYVTQEDFLKAVDKV.............................................................................................................................................................................................................................................................................................................................. 245
51 -12.8001qvr_A mol:protein length:854 ClpB protein  ali model follow..  20  558...............KRVVGQDEAIRAVADAIRRARAG-SFLFLGPTGVGKTELAKTLAATL-----------DTEEAMIRIDMTEYMEVSRLIGAP--GYEEGGQLTEAVRRRP----YSVILFDEIEKAHPDVFNILLQILDD---------RLTD---------SHGRTVDFRNILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF--RPLTKEQIRQIVEI----QLSYLRARLAEKRISLELAAKDFLAERGYDPVFGARPLRRVIQRELETPLA........................................................................................................................................................................................................................................................................ 821
52 -12.6003j3r_A mol:protein length:810 Negative regulator of genetic competence ClpC/MecB  ali model follow..  19  508...............SRVIGQDEAVVAVAKAVRRARAG-SFIFLGPTGVGKTELARALAESI----------------------GDEESMIRIDMSE--GYDEGGQLTEKVRRKP----YSVVLLDAIEKAHPDVFNILLQVLED--------LTDSKGRTV--TILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFR----EFINRIDEIIVF--HSLEKKHLTEIVSL----MSDQLTKRLKEQDLSIELAAKAKVAEEGVDLEYGARPLRRAIQKHV............................................................................................................................................................................................................................................................................. 773
53 -12.6003jco_I mol:protein length:437 26S protease regulatory subunit 4 homolog  ali model follow..  18  180.............SYSDIGGLESQIQEIKESVE--KPPKGVILYGAPGTGKTLLAKAVANQTSA-------------TFLRIVGSELIQKYLGDGPRL-----CRQIFKVAG-APS-----IVFIDEIDAIGTKRYDSLLNQLDDDRGDVKVIMATNKIETLDPALI-RPGRIDRKLFENPDLSTKKKILIHTSKMNLSEDVLETLVTTKDDLSADIQAMCTEALRERRMQVTAEDFKQAKERVMKNKVEENLEGL.................................................................................................................................................................................................................................................................................................................. 435
54 -12.6006em8_A mol:protein length:818 ATP-dependent Clp protease ATP-binding subunit ClpC  ali model follow..  18  508...............ERVIGQKDAVNSISKAVRRARAG-SFIFLGPTGVGKTELARALAESM----------------------GDDDAMIRVDMSE--GHDDGGQLTEKVRRKP----YSVILFDEIEKAHPDVFNILLQVLDD--------LTDTKGRTV--TIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFR----EFLNRVDDIIVF--HKLTKEELKEIVTM----MVNKLTNRLSEQNINIIVKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLS........................................................................................................................................................................................................................................................................ 778
55 -12.6006epc_M mol:protein length:442 26S proteasome regulatory subunit 6A  ali model follow..  20  187.............QYSDIGGLDKQIQELVEAIV--QPPKGVLMYGPPGTGKTLLARACAAQTKAT--------------LKLAGPQLVQMFIGDGAKL-----VRDAFALAK-APS-----IIFIDELDAIGTKTMLELLNQLDQPNTQVKVIAATNRVDILDPALL-RSGRLDRKEFPMPNEEARARIMIHSRKMNVSPDVYEELARCTDDFNAQCKAVCVEALRRGATELTHEDYMEGILEVQAKKKANL...................................................................................................................................................................................................................................................................................................................... 438
56 -12.5001w5s_A mol:protein length:412 ORIGIN RECOGNITION COMPLEX SUBUNIT 2 ORC2  ali model follow..  15  13...RVFDENYIP---PELRVRRGEAEALARIYLNSDVNMIYGSIGRVGIGKTTLAKFTVKRVNAFNAPNLY-----TILSLIVRQTGYPIQVRGAPALDILKALVDNLYV------ENHYLLVILDEFQSMLSSPLYTLLRVHEEGVNRIGFLLVASDVRKIPQVESQIGFKLHLPAYKSRELYTILEQRAELRDTVWEPRHLELISDVYDGSARRAIVALKMACEMAEDSLSEDLVRKAVSENEAASIQTHELEALSIHELIILRLIAEATLGGMEWIN-AGLLRQRYEDAS-------LTMYNVKPRGYTQYHIYLKHLTSLGLVDA......................................................................................................................................................................................................................................... 370
57 -12.5005j1s_A mol:protein length:284 Torsin-1A  ali model follow..  15  19...............DNLFGQHLAKKIILNAVFKPKKPLTLSLHGWTGTGKNFVSKIIAENI-------------------YEGGLNSDYVHLFVATLSNITLYKQLQLWIRGNVSACARSIFIFDQMDKMHAGLIDAIKPFLDY--QKAMFIFSNAGAERITDVALDFWRS-QREDIKLKDIEHALSV--------------SVFNNKNSGFWHSSLNLIDYFVPF---PLEYKHLKMCI-EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD...................................................................................................................................................................................................................................................................................... 284
58 -12.4005ubv_A mol:protein length:246 ATPase domain of i-AAA protease  ali model follow..  20  4.............RFSDVHGCDEAKEELQELVEGGKLPKGVLLVGPPGTGKTLLARAVA-------GEAGVP--------YMSGSEFDEIYVGVGAKR-----VRELFNAAK-APS-----IVFIDELDAIVRQTLNQLLTEMDAQNSGVIILGATNFPESLDKALT-RPGRFDRHHVSLPDVRGRIAILHHAKKIKIGSDVIAAIAARTSGSGAELENIVNQAAVHASKE........................................................................................................................................................................................................................................................................................................................................... 226
59 -12.4004w5w_A mol:protein length:391 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic  ali model follow..  12  54.SYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVNIKVPLILGIWGGKGQGKSFQCELVMAKMG------------------------INPIMMSAGEGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGNNQMVNATLMNIADNPARVPIICTGNDFSTLYAPLI-RDGRME-KFYWAPTREDRIGVCKG-RTDKIKDEDIVTLVDQFPGQSIDFFGAL--------ARVYDDEVRKFVESLGVEKIGK--RLVNSREGPPVFETYEKLMEYGNML............................................................................................................................................................................................................................................................................................ 343
60 -12.3005gjq_I mol:protein length:440 26S protease regulatory subunit 4  ali model follow..  18  183.............TYADIGGLDNQIQEIKESVE--KPPKGVILYGPPGTGKTLLAKAVANQTSA-------------TFLRVVGSELIQKYLGDGPKL-----VRELFRVAE-APS-----IVFIDEIDAIGTKRYDSLLNQLDDSRGDVKVIMATNRIETLDPALI-RPGRIDRKEFPLPDEKTKKRIFIHTSRMTLADDVLDDLIMAKDDLSADIKAICTEALRERRMKVTNEDFKKSKENVLYKKQEGTPEGL.................................................................................................................................................................................................................................................................................................................. 438
61 -12.3001ixz_A mol:protein length:254 ATP-dependent metalloprotease FtsH  ali model follow..  20  14.............TFKDVAGAEEAKEELKEIVEGARIPKGVLLVGPPGVGKTHLARAVA-------GEARVP--------TASGSDFVEMFVGVGAAR-----VRDLFETAK-APC-----IVFIDEIDAVGRQTLNQLLVEMDEKDTAIVVMAATNRPDILDPALL-RPGRFDRQAIDAPDVKGREQILIHARGKPLAEDVLALLAKRTPGVGADLENLLNEAALLAARKITMKDLEEAAS................................................................................................................................................................................................................................................................................................................................ 254
62 -12.2004ypl_A mol:protein length:555 Lon protease  ali model follow..  14  82.........YGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSMN-------------RKFHRISLGGVRDEAEIRGHRRTYIGAIHAMKQVGVINP------VILLDQIDKMSSD--SAMLEVLDPEQSKVFFITTANTLQTIPRPLLDRMEVIEIPGYTNMEWPKQVRESGMEGRIEVTDAAILRVISTREAGVRGLERELGKIARKGAKFIDASDIPTYLGKAETEPQVGTAQGLAWTPVGGTLLTIEVAAVPGSGKLSLTGQLGEVMKESAQAALT........................................................................................................................................................................................................................................................................ 404
63 -12.2003whk_A mol:protein length:270 Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A  ali model follow..  20  15.............TYNDIGGLKKQLQELREAIE--DPPKGVLLYGPPGCGKTLMAKAIAHEVNAT--------------IRVVGSELVRKYIGEGARL-----VHELFELAK-APT-----IIFIDEIDAIGAKTLMQLLAEMDDPRGNVKVIAATNRPDILDPALL-RPGRFDRLEVPLPDEFSRAQILIHSRKMTTDDDIWQELARSTDENGAQLKAVTVEALRNGQSSVKHEDFVEGISEV.............................................................................................................................................................................................................................................................................................................................. 258
64 -12.2003jco_K mol:protein length:428 26S protease regulatory subunit 6B homolog  ali model follow..  15  170.............TYADVGGLDMQKQEIREAVE--DPPRGVLLYGPPGTGKTMLVKAVANSTKAA------------------------FIRVNGSEGEGPRMVRDVFRLAR-APS-----IIFIDEVDSIATKILIELLTQMDDQSTNVKVIMATNRADTLDPALL-RPGRLDFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSAVIAAIMQEAVRKNRYVILQSDLEEAYATQVKTDNTVDK..................................................................................................................................................................................................................................................................................................................... 423
65 -12.2002qby_B mol:protein length:384 Cell division control protein 6 homolog 3  ali model follow..  16  11...VFIDPLSVF---KEIPFREDILRDAAIAIRKNEVKFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEE-CREVGGTPQAVLSSLAGKLTGFSVPKHGI-NLGEYIDKI-KNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLRSDANISVIMISNDINVRDYMEPRVLSVIFKPYDAEQLKFILSKYAEYIKGTYDDEILSYIAAISHGDARKAVNLLFRALASGGGIIRKEHVDKAIVDYEQERLIEAVKALPFHYKLALRSLIESE................................................................................................................................................................................................................................................................................................... 297
66 -12.2002qby_A mol:protein length:386 Cell division control protein 6 homolog 1  ali model follow..  12  11...EYLLPDYIPDELPHREDQRKIASILAPLYREEKPNNIFIY-GLTGTGKTAVVKFVLSKINTRQIDTPY-----RVLADLLESLDVKVPFTGLSIAELYRRLVKAVRD------YGSQVVIVLDEIDAFVKKYNDDILYKLSRINSEVISFIGITNDVKFVDLLDPRVKEIIFPPYNAEELEDILTKRAQM---VLPDNVIKLCAALAHGDARRALDLLRVSGEIAERMVKEEYVYMAKEEIERDRVRDIILTLPFHSKLVLMAVVSISSEENVVST--TGAVYETYLNIC--------KKLGVEAVTQRRVSDIINELDMVGILTA......................................................................................................................................................................................................................................... 347
67 -12.1001lv7_A mol:protein length:257 FtsH  ali model follow..  22  10.............TFADVAGCDEAKEEVAELVEGGKIPKGVLMVGPPGTGKTLLAKAIA-------GEAKVP--------TISGSDFVEMFVGVGASR-----VRDMFEQAK-APC-----IIFIDEIDAVGRQTLNQMLVEMDEGNEGIIVIAATNRPDVLDPALL-RPGRFDRQVVGLPDVRGREQILVHMRRVPLAPDIAAIIARGTPGSGADLANLVNEAALFAARG........................................................................................................................................................................................................................................................................................................................................... 235
68 -12.0005udb_9 mol:protein length:513 Cell division control protein 6  ali model follow..  10  65.SSELVNLNSSD---GALPARTAVMNFLAKAISEHRSDSLYI-TGPPGTGKTAQLDMIIRQKFQSLPLSLSTPRSKDVLRHTNPNLQVAVTSINCISLGEPSSIQKIFDSFQDLNGPTLQIMDRLLHANTSETQSVRTILELFLLAPTVSFVLIGMANSLDMKDRFLSRLQTIVFQPYTAEQMYEIVIKMSSLPTIIFQPMAIKFAAKKCTGDLRKLFDVLRGSIEIYEFLLSPTRGSLNSAQVPLTPTTSPVKKSYPEPQGKILNYIAKVFSKFVNNNSTRTRILNIQQKLILCTII--------------QSLKLNSDATIDESFDHYIKAITKTDTLAPLQRNEFLEICTILETCGL.......................................................................................................................................................................................................... 470
69 -12.0003h4m_A mol:protein length:285 Proteasome-activating nucleotidase  ali model follow..  21  15.............RYEDIGGLEKQMQEIREVVE--EPPKGILLYGPPGTGKTLLAKAVATETNAT--------------IRVVGSELVKKFIGEGASL-----VKDIFKLAK-APS-----IIFIDEIDAIAAKTLMQLLAEMDDARGDVKIIGATNRPDILDPAIL-RPGRFDRIEVPAPDEKGRLEILIHTRKMNLAEDVLEEIAKMTEGVGAELKAICTEAGMNARDYVTMDDFRKAVEKIMEKKKVKVKEP................................................................................................................................................................................................................................................................................................................... 269
70 -11.9002r62_A mol:protein length:268 Cell division protease ftsH homolog  ali model follow..  22  9.............RFKDMAGNEEAKEEVVEIVDGAKIPKGVLLVGPPGTGKTLLAKAVA-------GEAHVP--------SMGGSSFIEMFVGLGASR-----VRDLFETAK-APS-----IIFIDEIDAIGKQTLNQLLAEMDGSENAPVIVLAATNRPEILDPALMRPGRFDRQLVDKPDFNGRVEILVHIKGVKLANDVLQEVAKLTAGAGADLANIINEAALLAGRN........................................................................................................................................................................................................................................................................................................................................... 236
71 -11.9006ap1_A mol:protein length:519 Vacuolar protein sorting-associated protein 4,Protein hcp1  ali model follow..  19  32.............KWEDVAGLEGAKEALKEAVI--KPTSGILLYGPPGTGKSYLAKAVATEANS------------------------TFFSVSSSDGESEKLVKQLFAMARNKPS-----IIFIDEVDALSRRIKTELLVQMNNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLA-TTMFEINVGDTPCVLTKEDYRTLGAMTEGSGSDIAVVVKDAL................................................................................................................................................................................................................................................................................................................................................. 248
72 -11.9003t15_A mol:protein length:293 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic  ali model follow..  12  1............NLDNKLDGDKLVVHITKNFLKL-KVPLILGIWGGKGQGKSFQCELVFRKMG------------------------INPIMMSAGEGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGNNQMVNATLMNIADNPARVPIIVTGNDFSTLYAPLI-RDGRMEYWAPTREDRIGVCTGIFRTDNVPAED-----VVKIVDNFPGQSIDFFGALRA----RVYDDEVRKWVSGTGIEKIGD--KLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLAD.......................................................................................................................................................................................................................................................................... 292
73 -11.9005t0g_E mol:protein length:403 26S protease regulatory subunit 10B  ali model follow..  19  145.............SYSEIGGLSEQIRELREVIE--IPPKGCLLYGPPGTGKTLLARAVASQLDC-------------NFLKVVSSSIVDKYIGESARL-----IREMFNYAR-QPC-----IIFMDEIDAIGGRRFSELLNQMDDTLHRVKMIMATNRPDTLDPALL-RPGRLDRKHIDLPNEQARLDILIHAGPITKHGEIYEAIVKLSDGFNADLRNVCTEAIRADHDFVVQEDFMKAVRKVADSKKLESK..................................................................................................................................................................................................................................................................................................................... 397
74 -11.8001d2n_A mol:protein length:272 N-ETHYLMALEIMIDE-SENSITIVE FUSION PROTEIN  ali model follow..  16  1MRGSGSTMDIKPAASYIMNGIIKWGDPVTRVLDDGELLVSVLLEGPPHSGKTALAAKIAEESNFP--------------IKICSPDKM----IGFSETAKCQAMKKIFDDAY----KSQLSCVVVDDIERLSNLVLQALLVLLKPPQGRKLLIIGTTSRKDV-LQEMEMLNAFSTTHVPNIATGEQLLEALELLG-NFKDKERTTIAQQVKGK--KKLLMLIEMSLQMDPEYRVRKFLALL................................................................................................................................................................................................................................................................................................................................. 255
75 -11.8005ofo_C mol:protein length:871 Chaperone protein ClpB,ATP-dependent Clp protease ATP-binding subunit ClpA,Chaperone protein ClpB  ali model follow..  22  172.....LTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLI-GEPGVGKTAIVEGLAQRIINGEVPEG---------------KGRRVLALDGAKYRG-ERLKGVLNDLAKQEGN----ILFIDALHTMAMDAGNMLKPALAR--GELHCVGATTEYRQ--AALERRFQKVFVAEPSVEDTIAILRGLKERHHVQITDPAIVAAATLSHRYIADAIDLIDEAAS................................................................................................................................................................................................................................................................................................................................................ 403
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

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