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current user: public |
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Query: gi|30260214|ref|NP_842591.1| hypothetical protein (BA_0020) [Bacillus anthracis str. Ames], from B.anthracis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . | |||||||
# | Score | Template | Links and tools | %id | First | MMRGGMGNMNNMMKQMQKMQKEMAKAQEELGEKTVEGTAGGGMITVIANGHKQILEVKVKEEVVDPEDIEMLQDLVLAATNDALKKADELSNSTMGKFTKGLNLPGGMF | Last |
1 | -40.500 | 1pug_A mol:protein length:109 Hypothetical UPF0133 protein ybaB | ali model follow.. | 38 | 3 | ....GKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPSLLED-DKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGF. | 105 |
2 | -40.300 | 1ybx_A mol:protein length:143 Conserved hypothetical protein | ali model follow.. | 57 | 34 | .....GGNINNLVKQAQKMQRDMERVQEELKEKTVEASAGGGAVTVVATGRKDIKEITIKPEVVDPDDVEMLQDLILAAVNEALRKADEMVTAEISKITGGLGGIPGLF | 137 |
3 | -39.300 | 1j8b_A mol:protein length:112 YbaB | ali model follow.. | 38 | 6 | ....GKGGLGGLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMED-DKEMLEDLIAAAFNDAVRRAEELQKEKMASVTAGMPLPPGM. | 108 |
4 | -39.300 | 3f42_A mol:protein length:99 protein HP0035 | ali model follow.. | 20 | 1 | ....GHMDFSQLGGLLDGMKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLLE--DKEAMQIYLMSALNDGYKAVEENRKNLAFNMLGNFA...... | 97 |
5 | -38.500 | 5yrx_A mol:protein length:139 Nucleoid-associated protein Rv3716c | ali model follow.. | 32 | 1 | ..MQPGGDMSALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDDIETLQDLIVGAMRDASQQVTKMAQERLGALAGAMRPPA... | 104 |
6 | -7.250 | 2m2k_A mol:protein length:131 HasB protein | ali model follow.. | 14 | 38 | ................SRISGRLNRFKRYPKDALRLKRQGVGQVRFTLDRQGHVLAVTL----VSSAGLPSLDREIQALVKRA-SPLPTPPADAYVNGTVELTLP.... | 121 |
7 | -7.170 | 5lw8_A mol:protein length:92 Protein TonB | ali model follow.. | 18 | 5 | ...............LMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKV----VKSNTTDILNHAALEAIKSA.......................... | 68 |
8 | -6.480 | 4n7r_C mol:protein length:310 Genomic DNA, chromosome 3, P1 clone: MXL8 | ali model follow.. | 9 | 204 | .............EDIFRFCNVYVDLDFVVSETKMIWMDRLGFLRVWSPRGVYDVRIPFPMEV---TDEKGAKSSFNGMSQLAWEVEKSYCPADFNKV........... | 286 |
9 | -6.470 | 3m9b_A mol:protein length:251 Proteasome-associated ATPase | ali model follow.. | 12 | 68 | ......ARNSKLMETLKEARQQLLALREEVDRLGLLATHDDDTVDVFTSGRKMRLTCNIDAASLKKGQTVRLNEALTVVEAGTFEAVGEIST................. | 163 |
10 | -6.230 | 4adz_A mol:protein length:136 CSOR | ali model follow.. | 13 | 49 | .............KQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDI-------LTQVSASTKALQSFALQLLEEHLRHCVADAALKGGTEIDAKVEEATKAI....... | 130 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |