current user: public
If you have questions about the server, please let us know.

Query: gi|30260205|ref|NP_842582.1| glutamine amidotransferase subunit PdxT (BA_0011) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .
# Score Template Links and tools%idFirst MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYDFMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYDEAHIGAMDITVERNAFGRQKDSFEAALSIKGVGEDFVGVFIRAPYVVDVADDVEVLSTHGDRMVAVKQGPFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVVLast
1 -64.400PF01174.19; SNO3_YEAST/7-217; SNO glutamine amidotransferase family  ali follow..  36  1.....VLALQGAFIEHVRDFYEKKLSVMTVKDKNQLAQCDALIIPGGESTAMSLIAERTGFYDDLYAFVHNPKVTWGTCAGLIYISQQLSNKLVKTLNLLKVKVKRNAFGRQAQSSTRICDFIPHCNDFPATFIRAPVIEEVLDHVQVLYKLELIVAAKQKNNILATSFHPELAEDIRFHDWFIREF......... 209
2 -43.900PF07685.14; COBQ_PHOLL/253-451; CobB/CobQ-like glutamine amidotransferase domain  ali follow..  15  1..DITVIRLPANFTDFNALAVQPDVRLRYVTQPSALQPSDLIILPGKNTLGDLQWLRQNGLADALLTAHQAGVPVIGICGGYQMLGKRIIDEQMDGLGLLDMETKVTTRVNGNCLLALPGLLSECVEQPIRGYEIHMGSSLLGADATPFIDIWCDGAVNREGSVMGSYIH.......................... 191
3 -28.900PF00117.28; GUAA_BACSU/10-192; Glutamine amidotransferase class-I  ali follow..  18  2.....VLDFGSQYNQLIRRIREFGVYSELHPHTLTAEEIKGIILSGGPNS-----VYDENSFRCDEKIFELDIPVLGICYGMQLMTHY--------LGGKVEAASQREYGKANIRIEGTPDLFRDLPNEQVVWMSHGLVVEVPEGFTVDATSHHCPNSAADKKWYGVQFHPEVEYGNDLLKNFVFGV......... 183
4 -19.700PF04204.16; A4VVY3_STRSY/19-316; Homoserine O-succinyltransferase  ali follow..  13  35.IKILILNLMPQKIVTETQLLRL-KQFYKTFEQVRDSYFDGLIVTGAPVENLPF----HELTQVFDWSKTHVYSTLHICWGAQAGLYAR--------GVPKHSMSRKLSGVYCQEVTNPTSMRGFDDEFRSPHSRYTEVIAHLSGLTILSQGPESILASKDLRGIYSFGHLEYDRDT-LAKEYQRDCIAGKNPHL. 258
5 -17.700PF09825.9; E9DJA3_COCPS/13-393; Biotin-protein ligase, N terminal  ali follow..  18  1.LNILVYSGNGSVRQCLFTLRRL-VTGEMIINEPWTSSCALFVMPGGADLPYCRTLNGTGN-RRISQFVHRGGAYLGFCAGGYYGSKRLEVVGDRELAFYPGICRGCAFPGFVYNSEDGARASHIPPSFKSYYNGGGVFVDAPKGVEVLADYTGHAAVVYEGAALLTGPHPEFAAS.................... 225
6 -17.500PF13507.6; A5WCV9_PSYWF/1086-1340; CobB/CobQ-like glutamine amidotransferase domain  ali follow..  22  3..KVAILREQGV-LEMAAGFVRAGFDAVDVEGRIDLRDFNGLVACGGFS-ANSILFHDELRMQFVRFFTRPDTFSLGVCNGCQMMAQLLIPGAENFPRFTYNKSARFEARTVNVKIERTKSILLKGMQDSFATLNESEIDGMANHGQIAMRYVDS-ICSTDGRVTLMMPHPERT...................... 225
7 -16.900PF03575.17; B3DL55_XENTR/8-211; Peptidase family S51  ali follow..  12  32..RVLFIPYALHAKTARQKFEALGYGLDSVHESPDVKKAEAIFIGGGNTFRLLKALYDSDLIAAIRKRVEDGVPYIGSSAGTNVATVSINTTNDQALHLVPFNI............................................................................................ 152
8 -16.600PF07722.13; A1RCW2_PAEAT/13-231; Peptidase C26  ali follow..  19  27....PLVEFSGCVPVLVPTCCGTD------DLEQYLDMADGVYLTGAGSNIDPALYDQENELPLIRAAIARGLPIFGICRGMQEINVALGGDIYQKVYAEPGFNDHRYAPSHSVRPVAGSWFAELMGKGEIQVLHGQAIRNLGKGLEVLATAEDGLIEAIHAPLFAVQWHPE........................ 219
9 -16.100PF17385.2; R5GX63_9FIRM/441-661; Lacto-N-biose phosphorylase central domain  ali follow..  14  1..KVAVLKQNYSYAGIIEALSGAPFEVSFLSADSLLKEIDVIINVGDGDTAHTAAWENPAVAAAIRKFVYEGGGFIGVGEPSGHAYQGHYLQLADLIGVEKETGFTLNYDKYNWEEHPEHFILQDITK-PVDFGEGKKNMYAYADTEILVQRDREVQMAVKGRSVYISGLPYSFENSRILYRSILWSAHGED.... 220
10 -13.600PF17124.5; U4L1Y6_PYROM/15-242; ThiJ/PfpI family-like  ali follow..  14  103..................................LVSILDIVLLPGGHDKPIRQYLESESLHRQLEKFLEPHKVLGAICHGVLSLAFAKCPVKQKSLLAEH--------NLQTTTLPRWME--ATAWILSQAWFMGYYYRTYP------DRWCYVDAEQAGGQYIR----P......................... 228
11 -13.500PF18011.1; G4N797_MAGO7/564-712; C-terminal domain found in long catalases  ali follow..  17  3.LRVGVLASTGQAADLKARFMGDGVAVAVLGSQSDATVFDGIIIAAGAEGPASALFPIGRPQQLVVDSFRWGKPIGLAAASDDSANI............................................................................................................. 111
12 -13.200PF01965.24; PARK7_MOUSE/4-171; DJ-1/PfpI family  ali follow..  20  2..RALVILAKGETVIPVDVMRRAGIKVTVAEDAKTQGPYDVVVLPGGNLGA-QNLSESPMVKEILKEQESRKGLIAAICAGPTALLA............................................................................................................. 111
13 -9.220PF08532.10; Q5WC61_BACSK/410-615; Beta-galactosidase trimerisation domain  ali follow..  12  1.ADVAIIGYASQVQSHYRSFWKHGVPVDVVSMNDDISTCKIVVAP-------MLYMLKPGVAEQIEAYVKNG--------GTFIATYWSGIVDETD-GPLKPVLGVWAEEIDSLYKHETVPFTWNGDTYEAHSFIERIHLKGAETIAAFQGGSSPTPAVGKGTAYYMASANEQRFYDAFYELLINEH......... 203
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 2 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.