| | | | | | . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 . 500 . 510 . 520 . 530 . 540 . 550 . 560 |
# |
Score |
Template |
Links and tools | %id | First |
MSYQALYRTWRPQKFEDVVGQKHVTKTLQNALLQEKVSHAYLFSGPRGTGKTTIAKVFAKAINCEHAPVAEPCNECPSCLGITQGSISDVLEIDAASNNGVDEIRDIRDKVKYAPSAVEYKVYIIDEVHMLSMGAFNALLKTLEEPPGHVIFILATTEPHKIPPTIISRCQRFEFRKISVNDIVERLSTVVTNEGTQVEDEALQIVARAAEGGMRDALSLIDQAISYSDERVTTEDVLAVTGSVSQQYLGNLVECIRENDVSRALRIIDEMMGKGKDPVRFMEDFIYYYRDMLLYQTSPQLEHMLERVMVDEQFRMLSEEMQPEVIYEIIHTLSKGQQEMKWTNHPRIFLEVVMVQLCQQFMMQANGADRLQAIMNRMQQLEKELEQVKKNGVPVGVQQEVKETRAAPKPVRTGSMKIPVGRVNEVLKQAKRQDLEQLKAVWGELLGRLKAYNKVAFAVLLENSEPVAASDDTYVLAFQYEIHCKMASENREAMDTVEQALFELLSKKLNMIAIPKSEWGKIREDFLKREGGSSEESPEKKEDPLIEEAIKLVGQELIEIKE | Last |
1 | -65.900 | PF13177.6; A5VIC8_LACRD/13-171; DNA polymerase III, delta subunit |
ali follow.. |
32 | 1 | ....................QPAIITRFQKILSNNELAHAYLFVGPGGSGKMSIAQWLSLRLFCLHPQDNEPDLTCAECQRILSGNHPDIVYAAPEGRQKVDEIRRLKAEFSKSAVEGNKKIFIIKDADKMTNGAANSLLKFIEEPGAGVYIFMLTTNKSAVLPTIRSRTQVIELPPL................................................................................................................................................................................................................................................................................................................................................................................................ |
159 |
2 | -40.200 | PF05496.12; RUVB_BACAN/21-179; Holliday junction DNA helicase RuvB P-loop domain |
ali follow.. |
19 | 1 | .........LRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLLYGPPGLGKTTLANIIANEMGVNVRTTSGPAIERPGDLAA------VLTSLQPGDVLFIDEIHRLHRSIELYPAMEDFCLDIVIGKGPSA--------RSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLS.................................................................................................................................................................................................................................................................................................................................................................................................... |
157 |
3 | -32.900 | PF05673.13; Q0K6N5_CUPNH/29-287; Protein of unknown function (DUF815 topsan) |
ali follow.. |
14 | 19 | .GYLQPVRQLPPIHLDDLKNIERQKDAIVANTRSKLPANNVLLTGARGTGKSSLIKACLNAFVRDG---------------------LRLVEVD---KDDLGDLGDIVELVAQRPE--RFVIFCDDLSFEEGESGYKSLKSALDAQSDNVLIYATSNRRHLLPEYMKDNETHTDDGEIHPGEVVEEKISLSERFGLWLS-AIVGHWLRHFGCTDEDIAAARGDALVWASGRVAWQFARDWGG................................................................................................................................................................................................................................................................................................................................ |
257 |
4 | -24.800 | PF12169.8; Q11B01_CHESB/247-389; DNA polymerase III subunits gamma and tau domain III |
ali follow.. |
18 | 1 | .......................................................................................................................................................................................................................................VTAETVRDMLGLADRARVIDLFEHLMKGDVAAALAEYRAQYDAGADPAAVLTDLAEFNHLVTRMRFVPDANDGSLPQEERTRGLEFSKNLSVRVLSRTWQMLLKGIQEVQGSSRPISAGEMVLIRIAHAANLPTLDEALKT.............................................................................................................................................................................................. |
142 |
5 | -16.300 | PF03215.15; RAD24_YEAST/58-237; Rad17 P-loop domain |
ali follow.. |
17 | 10 | ......YEKFKPNCLEQVAIHKDVQEALDAMFLPNAKHRILLLSGPSGCSKSTVIKELSKILVPKYRQNSNG-----------TSFRSTPNEHKVTEFRGDCIVNDLPQMESFSEVMSNLSLILIEDLNVFHIDTRRRFQQLILQ-------WLYSSEPLLPPLVIC........................................................................................................................................................................................................................................................................................................................................................................................................... |
165 |
6 | -12.800 | PF17864.1; RUVB_ALKMQ/186-259; RuvB AAA lid domain |
ali follow.. |
15 | 2 | ..................................................................................................................................................................................NNKQLTAIVKRSARILDAYIDDEGATEIASRSRGTPRIANRLLRRVRDYADGRITKRVAEEALILLEVD........................................................................................................................................................................................................................................................................................................................... |
74 |
7 | -12.100 | PF00004.29; LON_BRECH/351-493; ATPase family associated with various cellular activities (AAA) |
ali follow.. |
23 | 2 | .........................................CLVGPPGVGKTSLARSVARALG-------------REFVRISLGGVRDEAEIRGHRRTYVGAL-RIIQGMKQAGTIN--PVFLLDEIDKLASDPASALLEVLDPNQTNVMFITTANSLDTIPRPLLDRMEVISI................................................................................................................................................................................................................................................................................................................................................................................................... |
140 |
8 | -12.000 | PF07724.14; Q7PAG5_RICSI/595-759; AAA domain (Cdc48 subfamily) |
ali follow.. |
21 | 5 | .......................................SFLFLGPTGVGKTELTKALAGFL-----------DDRNAILRIDMSEYMEKHAISRLIGAGYDQGGVLTEAVRRRP----YQVILFDEVEKAHPDIFNIMLQILDE--KNTIIVLTS----NLGAEILVNQKEDEDTYKVKDEVMEYVKAVFKPEFLN............................................................................................................................................................................................................................................................................................................................................................................. |
160 |
9 | -11.400 | PF01637.18; A8M939_CALMQ/15-228; ATPase domain predominantly from Archaea |
ali follow.. |
11 | 1 | ..............F---TDREVAIRQIEKLAEKGT-WNPVVIYGPEGCGKSAFLKQAVEVLSPLEDESNEKLRYSEELRGLFRDIMTRIPTPFNDASALIDIAISLLYDVVRRRIRRKI-ALLADDVFAIGLDKAELLVKRLLN--YERIVVIVATSEGVTWGRIGRHAEIMAMWNMPREGFGKLYNALPGPK------PPFEEVWRWTGGN---ALEML..................................................................................................................................................................................................................................................................................................................................................... |
214 |
10 | -11.200 | PF01078.21; Q8EJV7_SHEON/193-396; Magnesium chelatase, subunit ChlI |
ali follow.. |
17 | 1 | .............CLSEVIGQYQAKQALEIAAAGN---HNLLMLGPPGTGKTMLASRMMALLPALNYEEALEVAAIHSVAGINIKPQDFLKRPFRAPHHTCSSISLVGGGSIPKPSLAHRGVLFLDEVAEFPRKVLDCLREPMET-LSRFQLIAAMNP---------SPSGDID-------------------GPNRATPDQIQRYLARLSGPFIDRFDLTIEVPKLPAGTL.......................................................................................................................................................................................................................................................................................................................................... |
204 |
11 | -11.100 | PF00308.18; DNAA_STRCO/317-535; Bacterial dnaA protein |
ali follow.. |
14 | 1 | .....LNPKYLFDTF--VIGASN-AAAVAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYA-----------------RSLYPGTRVRYVSSEEFTNEFINSIRD-GKGDSFRKRYREMDILLVDDIQFLADHTFNTLVLSSDRPPKQL---------VTLEDRLRNRFEWGLITDVQPPELETRIAILAVQEQLNAPPEVLEFIASRISRNIRELEGALIRVTAFAS............................................................................................................................................................................................................................................................................................................................................. |
217 |
12 | -11.000 | PF06144.13; Q8E0E6_STRA5/20-192; DNA polymerase III, delta subunit |
ali follow.. |
11 | 1 | .........................................VLAGEDLGQYAQMKEKLFQVIG-------------------FNKDDLAYSYFDLSE----EDYQNAELDLESLPFLSDYKVVIFDQFQDITTDKMKRFEAYLQNPVDTTRLVICAPGKRRLVKLLKRDARVLEANTLKESDLKTYFQKYAHQEGLVFEAGVFDELLIKSNYDFSDTLTNIAFL.................................................................................................................................................................................................................................................................................................................................................. |
172 |
13 | -10.600 | PF03266.15; NTPTH_METAC/3-167; NTPase |
ali follow.. |
11 | 2 | ........................................IAVTGSPGVGKSTVVAKTAEKLAEKPGFKIG---RTAEIRKEGHREGFSIRDLATGKTGILSHVKGSGPRANAVRNALACDLVVIDEIGPMESQSFVSAVEEVLESDKPVLAVLHHSSRHPLAQRFRKGFEVLTVDKGNRDELPEKI....................................................................................................................................................................................................................................................................................................................................................................................... |
164 |
14 | -10.300 | PF07726.11; Q87G66_VIBPA/36-166; ATPase family associated with various cellular activities (AAA) |
ali follow.. |
19 | 3 | .........................................LVEGPPGLAKTRAVKSLSDCVEGDHRIQFTP----------------DLLPAD----TGTDIFRPETGEFTFQSGPIFNSLILADEINRAPAKVQAAMLEAMAEALPELFLVMATQNPYPLPEAQLDR......................................................................................................................................................................................................................................................................................................................................................................................................... |
128 |
15 | -10.200 | PF02689.14; HELI_EHV2/2-789; Helicase |
ali follow.. |
15 | 1 | .......EEPGAGFILNMTSDSKVRAIVGRGLAAKTVPSTFLITGTAGAGKSTSISALYQSLNCL--ITGATAVAAQNLSNGLKTYCPTIYSAFGFKSRHINDMEGINELCKYTPTLWTTNIIVIDEAHILTAVVFNSWLQT----PLYVVCVGSPTQTDAIQSTYNHSMQKHHIQE-CDNILTFLMKHEAVSRYVDLNHNWALFIKRCTDPEFGHLLKTLEYNLDISPRMVDYID...................................................................................................................................................................................................................................................................................................................................... |
315 |
16 | -9.990 | PF18748.1; A0A0A0YSQ1_9CAUD/11-206; P-loop Nucleotide Kinase1 |
ali follow.. |
12 | 3 | .......................LMKPKPVQTRYPARGELFYVKACNGAGKSTIPSYCAERDPEAYTVSQD--------YGMLAFGKYDKSKSKGVDSLKDYDEMKKAVELSELEEFIGYTA-FFEGV--IPSTILHTWVEYLNRPARPLTTVFIDTDLETCLSRVNSRNGGAEFNADLVTEKFNRVMSHKTRHK--------ELFPSVPAVTIRSQGITIDEMVS................................................................................................................................................................................................................................................................................................................................................ |
196 |
17 | -9.770 | PF12170.8; F0LND5_VIBFN/559-697; DNA polymerase III tau subunit V interacting with alpha |
ali follow.. |
16 | 1 | ..................................................................................................................................................................................................................................................................................................................................................................................................................................ALEHEKTPEMTAKLIHEAIELDEWANIVQRLHTAK--LVEQLALNSTYKK-SGASIELTLRPS---HAHLNTDKAQSELLQALNDQLQEDCHLSVTIGDDGETPLERERLYQGKLSQAIDHLVADPTVQFIERRFSAELDK... |
136 |
18 | -9.690 | PF06309.11; O45271_CAEEL/5-130; Torsin |
ali follow.. |
14 | 24 | ...............RFIYGQHLVIDTVVRSIKHPQKPLVLSFHGGPGTGKNYVTEIIAKNT-------------------FRSGLQSPYVKYFVATKKHIEDYKLLKEQLIQSADGCDRSIFVF..................................................................................................................................................................................................................................................................................................................................................................................................................................................... |
126 |
19 | -9.660 | PF07652.14; Q32ZD8_9FLAV/1675-1822; Flavivirus DEAD domain |
ali follow.. |
12 | 1 | ...............................FKKKQLI---VLDPHPGAGKTRLPEFIRQAVEALAPTRVVAAEMAEALNGLPVRYLTPAVIQQHTGKEIVDLMCHFTMRLLSGGRVPNYNMFIMDEAHFTDPSSRGYISTKVDMGEASAVFMTATPPGSREP............................................................................................................................................................................................................................................................................................................................................................................................................... |
142 |
20 | -9.340 | PF05621.11; B7J739_ACIF2/21-211; Bacterial TniB protein |
ali follow.. |
16 | 17 | .....................NRLLDNLRSLMEKPVRPRMLLIVGDSNNGKTTVIRRFQKLHG----------------GVNEDAEPVPVIVSEAPPSADEKGLSKLRYQVVHLMRDCHVRILVIDEFHSLLTGTVTKAIKLLCNELAIPIVGVGIREAVRVLHTDPQHASRFDVVTLPPWEL........................................................................................................................................................................................................................................................................................................................................................................................... |
189 |