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Query: gi|30260205|ref|NP_842582.1| glutamine amidotransferase subunit PdxT (BA_0011) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVKIGVLGLQGAVREHVKSVEASGAEAVVVKRIEQLEEIDGLILPGGESTTMRRLIDKYDFMEPLRTFAKSGKPMFGTCAGMILLAKTLIGYDEAHIGAMDITVERNAFGRQKDSFEAALSIKGVGEDFVGVFIRAPYVVDVADDVEVLSTHGDRMVAVKQGPFLAASFHPELTDDHRVTAYFVEMVKEAKMKKVVLast
1 -87.700d2nv0a_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  67  1MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKAL. 195
2 -65.700d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}  ali model 3D-neighbors follow..  37  3.ITIGVLSLQGDFEPHINHFIKLSLNIIQVRNVHDLGLCDGLVIPGGESTTRCCAYENDTLYNALVHFIVLKKPIWGTCAGCILLSKNVENGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSKDLTAACIRAPYIREISDEVKVLATFSNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYKYS... 218
3 -61.800d4guda1 c.23.16.0 (A:3-202) automated matches {Vibrio cholerae [TaxId: 243277]}  ali model 3D-neighbors follow..  18  2..NVVIIDTGANISSVKFAIERLGYAVTISRDPQVVLAADKLFLPGGTASEAMKNLTERDLIELVKR---VEKPLLGICLGMQLLGKLSEEKGQKADEIVTGDLPLPHMGWNTVQVKEGHPLFNGIEPDAYFYFVHSFAMPVGDYTIAQCEYGPFSAAIQAGNYYGVQFHPERSSGARLIQNFLE........... 200
4 -61.000d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  22  1.MKALLIDYGGNLRSAAKALEAAGFSVAVAQDPKAHEEADLLVLPGGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEPGVRGLGLVPGEVRRPQMGWNALEFGGAFAPLTG----RHFYFANSYYGPLTPYSLGKGEYEGFTALLAKENLLAPQFHPEKSGGLAFLALARRYF......... 195
5 -58.200d1jvna2 c.23.16.1 (A:1-229) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Baker`s yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]}  ali model 3D-neighbors follow..  19  1MPVVHVIDVEGNLQSLTNAIEHLGYEVQLVKSPKDISGTSRLILPGGNYGHFVDNLFNRGFEKPIREYIESGKPIMGICVGLQALFAGSVEPKSTGLNYIDFKLSRPEIGWNSCIPSEN--LFFGLDPYKRYYFVHSFAAILNSEKIAKAKYGSFIAAVNKNNIFATQFHPEKSGGLNVIENFLKQQSPPIPN... 218
6 -57.900d3zr4b_ c.23.16.1 (B:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  16  1.MRIGIISVGGNIMNLYRGVKRASENFIELVESPRNDLYDLLFIPGGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEPGVKGLSLIEGNVVKPHMGWNEVIFKDT-------FPNGYYYFVHTYRAVCEEEHVLGTTEYIFPSAVRKGRILGFQFHPEKSSGRKLLEKVIECSLSRR..... 201
7 -30.700d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  18  1.MMIVIMDNGGQYHRIWRTLRYLGVETKIIPNTTPLEEIKGIIFSGGPSLE-----NTGNCEKVLEHYDEFNVPILGICLGHQLIAKF--------FGGKVGRGEKAEYSLVEIEIIDEXEIFKGLPKRLKVWESHMEVKELPPKFKILARSETCPIEAEELPIYGVQFHPEVEKGEEILRNFAKLCGE....... 188
8 -30.500d2vpia1 c.23.16.0 (A:25-219) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  3..AVVILDAGAQYGKVIRRVRELFVQSEIFPLETPAFAIRAIIISGGPNS-----VYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKV--------FGGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGSVDKVADGFKVVARSGNIVAGIANESLYGAQFHPEVENGKVILKNFLYDIAGCSGTFTV 195
9 -28.700d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  18  7..RILILDFGSQYQLVARRVRELGVYCELWAWDVTEAQISGIILSGGPES-----TTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQ--------LGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLVTAIPSDFITVASTESCPFAIEEKRFYGVQFHPEVTQGMRMLERFVRDICQCEA.... 204
10 -24.400d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  15  40.FHVVAYDF-GAKRNILRMLVDRGCRLTIVPAQTSAEDVDGIFLSNGPGDPA----PCDYAITAIQKFLETDIPVFGICLGHQLLAL--------ASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPA---RVTHKSLFDGTLQGIHRTDAFSFQGNPEASPGPHLFDHFIELIEQYRKT... 228
11 -23.500d1o1ya1 c.23.16.1 (A:2-227) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}  ali model 3D-neighbors follow..  14  1..RVLAIRHVEDLGMMEDIFREKNWSFDYLD-ERPLEEYSLVVLLGGYMGAYEEEKYPKYEFQLIEEILKKEIPFLGICLGSQMLAKVL--------ASVYRGKNGEEIGWYFVEKVSDNKFFREFPDRLRVFQWHGDTFDLPRRATRVFTSEKYE-GFVYGKAVGLQFHIEVGART................... 179
12 -22.500d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]}  ali model 3D-neighbors follow..  16  1.ADILLLDNVDSFTNLVDQLRASGHQVVIYRNQIQHMEQPVLMLSPGPGTP-----SEAGCMPELLQRLRGQLPIIGICLGHQAIVEA--------YGGQVGQAGEILHGKASAIAHDGEGMFAGMNPLPVARYHSLVGSNIPADLTVNARFGEMVMAVRDDRVCGFQFHPESTHGARLLEQTLAWALAK...... 192
13 -21.900d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  6...IGILMQKCR-ASYVKYLESAGARVVPVRLDLTFKSINGILFPGGSVDLRRSDYAKVA-LSIQSFDDGDYFPVWGTCLGFEELSTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFYKYPVYGVQWHPEKA-AFYLAEFFVNEARKNNHH... 255
14 -21.600d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]}  ali model 3D-neighbors follow..  13  20.LKIAILNLMPTKQETEAQLLRL-TSFYKTFRDIENEKFDGLIITGAPVETLSF----EELKRIMEYSKTNVTSTLHICWGAQAGLYHH--------GVQKYPLKEKMFGFEHEVREQHVKLLQGFDELFFAPHSRESDIREVKELTLLANSEEHLVIGQEGRQVFALGHSEYSCDT-LKQEYERDRDKGLNIDVP 244
15 -21.400d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Sulfolobus solfataricus [TaxId: 2287]}  ali model 3D-neighbors follow..  17  1MDLTLIIDYDSFVYNIAQIVGELGSYPIVIRNDEERIDPDRLIISPGPGTP--EKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYA--------FGAKIRRARKVFHGKISNIILVNNSPLSLYYGIAKEFKATRYHSLVVDEVDAISAEDNEIMAIHHEEIYGVQFHPETSLGYKILYNFLNRV......... 195
16 -19.100d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  15  4.VKIAIA---GKYVKMPDAYLSLLEALRHAGIKEAFRDVSGILVPGGFGVR-----GIEGKVRAAQYARERKIPYLGICLGLQIATEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIKPGTLLHRLY-LERAGLVVSATTPGMRGRGAGLVEAIELKDFLGLQSHPEFKSRSPPFVGFVEAALAYQ..... 250
17 -18.900d1fyea_ c.23.16.4 (A:) Aspartyl dipeptidase PepE {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  12  33..SAVFIPFAGVTDKTAEVLAPLGVNVTGIHRVADIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTIRTTNDDALDLFPLQI-NPHFTNALPEGHKGETREQGLPEGNWIQVSNGQAVLGGPNTTWVFKAGEEAVALEAGHRF............................... 229
18 -17.800d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]}  ali model 3D-neighbors follow..  16  8..KVAVLREQGV-VEMAAAFHRAGFDAIDVGGRIGLGNFHALVACGGFSGWAKSILFNHRVRDEFETFFRPQTLALGVCNGCQMMSNVRNHSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDN-VTTENGRVTIMMPHPERV...................... 231
19 -16.500d4y1ra1 c.23.16.0 (A:2-171) automated matches {Staphylococcus aureus [TaxId: 158878]}  ali model 3D-neighbors follow..  20  1TKKVAIILANEEYSSPKEALENAGFNTVVIGDTAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAG...................................................................................... 135
20 -14.400d3l18a1 c.23.16.2 (A:1-166) automated matches {Thermococcus onnurineus [TaxId: 523850]}  ali model 3D-neighbors follow..  20  1.MKVLFLSADGELIYPLHRIKEEGHEVYVASFQRDPDEFDALVLPGGKAPEIVR--LNEKAVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAG...................................................................................... 131
21 -13.900d2vrna_ c.23.16.0 (A:) automated matches {Deinococcus radiodurans [TaxId: 243230]}  ali model 3D-neighbors follow..  25  5.KKIAILAADGELTSPRAAIEAAGGTTELISLEPQVSDYDGLLLPGGTVNP-DKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAG...................................................................................... 141
22 -13.900d4ogga1 c.23.16.0 (A:3-190) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}  ali model 3D-neighbors follow..  19  3.RTVLILCGDYEVMVPFQALQAFGITVHTVCDEVDLSKYDGLVIPGGRAPEYLA--LTASVVELVKEFSRSGKPIASIXHGQLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVC.......................................................................... 161
23 -13.400d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Fungus (Neurospora crassa) [TaxId: 5141]}  ali model 3D-neighbors follow..  18  5..RVAIIIADGAYDAAYAAISANQAIPLVIGEGFRSTMVDAIFIPGGA-KAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAK............................................................................................................. 112
24 -13.300d3ttva2 c.23.16.0 (A:598-753) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  17  5..VVAILLNDEDLLAILKALKAKGVHAKLLYAGAPSLTVDAVIVPCGNIADIAD---NGDANYYLMEAYKHLKPIALAGDARKFKAT............................................................................................................. 110
25 -13.000d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]}  ali model 3D-neighbors follow..  19  1MTRIAIALAQDEPALLAAAARSATPDGMPVTSMGGLVDIDALVIPGGLSWEKGT---AADLGGLVKRFRDRDRLVAGICAAASALGGT---------GVLNDV............................................................................................. 116
26 -13.000d2rk3a_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  4..RALVILAKGETVIPVDVMRRAGIKVTVAEDAKKEGPYDVVVLPGGNLGA-QNLSESAAVKEILKEQENRKGLIATICAGPTALLAH............................................................................................................ 114
27 -13.000d4k2ha_ c.23.16.0 (A:) automated matches {Salmonella enterica [TaxId: 99287]}  ali model 3D-neighbors follow..  15  1MKKVAVLLAPGEAIVTLDILRRLHIDVETLACAESRALFDAVVLPGGPQGS-ANLAANPAVIAFVARHDAAGKLICPIASAAARVLGAH........................................................................................................... 113
28 -12.800d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  17  29.IKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGA-ECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPH........................................................................................................... 115
29 -12.700d3mgka_ c.23.16.0 (A:) automated matches {Clostridium acetobutylicum [TaxId: 1488]}  ali model 3D-neighbors follow..  16  2.YRIDVLLFNKDVFGPVEIFGNLKVRVETSLYTRDENIEKILFVPGGSGTR--EKVNDDNFINFIGNMVKESKYIISVCTGSALLSKA---------GILNGKRATTN------------------------KRSFKWVTEQNEDVLWVKE----ARWVKDGNIYTSS----VSAGIDMTLGFIEDLIGKEKALEI 178
30 -12.400d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  25  1MKKIGVILSG-EAVLTLLAISRSGAQAVCFAAQADAAELDALIVPGGFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIG.................................................................................................. 154
31 -12.100d4gdha_ c.23.16.0 (A:) automated matches {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}  ali model 3D-neighbors follow..  19  1.VKVCLFVADGEFSAPWGIFKRAEIPIDSVYADDFAKQYDIAIIPGGGLGA-KTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKT............................................................................................................ 118
32 -12.100d3l3ba_ c.23.16.0 (A:) automated matches {Ehrlichia chaffeensis [TaxId: 205920]}  ali model 3D-neighbors follow..  17  1LNSAVILAGCGEAVLVMLELDRHNVNFKCFAEQIRVEEFDMLVIPGGFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVA............................................................................................................. 143
33 -11.600d4xlla_ c.23.16.0 (A:) automated matches {Toxoplasma gondii [TaxId: 5811]}  ali model 3D-neighbors follow..  25  2.VKVLVPVAHDEAVSIIDTLRRAGAEVVVASVEDTEETYDCIAIPGG-MPGAERCRDSAALTAMLKTHKAQGKLIAAICASPAVVLQTH........................................................................................................... 113
34 -10.600d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]}  ali model 3D-neighbors follow..  17  40.YDVKVASIQGG-RSINEKDPSWAEAEAALKHTARLSKDDAIFLPGGH-GTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVK-----------GKTVTSFTDEEEREVGLDVH---FLLESTLRLRGANFVRGGKWTDFSVR---DGNLITGQNPQSSRS--TAEKVVAALEERE..... 221
35 -10.500d4lrua1 c.23.16.2 (A:1-236) automated matches {Candida albicans [TaxId: 237561]}  ali model 3D-neighbors follow..  12  93..................................DPNDYDIFFGSAGH-GTLFDYPNAKDLQKIATTVYDKGGVVSAVCHGPAIFENLNDPKTGEPL------------GKKITGFEDILGVTDIMKKGNLLTIKQVAEKEGATYIEPEGPWDNFT--VTDGRIVTGV-NPQSAV--KTAEDVIAAFECN...... 236
36 -9.830d4p5pa_ c.23.16.0 (A:) automated matches {Francisella tularensis [TaxId: 401614]}  ali model 3D-neighbors follow..  13  89..................................NIKEYDAIIFAGGH-GTMWDFPNNANIHSKVLDIYAKNGVIGAICHGVAALINVKDNNGQNIIR-----------DKEVTGFSNNEEKIVGLTDV---FSLEDSLVEAGAKYSSASEWQSYVKS---DSKIITAQNPQSATD--FAKAIKQSLFN....... 225
37 -9.480d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  12  138..................................ADSEYAAIFVPGGH-GALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNP---------------GYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGD-SPFAANA--LGKLAAQEMLAAYA.... 278
38 -9.270d1kwga3 c.23.16.5 (A:394-590) A4 beta-galactosidase middle domain {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  10  6..PVALVSYLGLVYLFYSALRRLGLDVDVVPPGASLRGYAFAVVPSLPIVRE----------EALEAFREAE--------GPVLFGPRSTETFQIPKELPPGPLQ-ALLPLKVVRVESLPPGLLEVAEGALGRFPLGLWREWAPLKPLLTFQDGKGALYREGRYLYLAAWPSPELAGRLLSALAAEA......... 194
FFAS is supported by the NIH grant R01-GM087218-01
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Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.