current user: public |
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Query: gi|30260210|ref|NP_842587.1| isochorismatase family protein (BA_0016) [Bacillus anthracis str. Ames], from B.anthracis |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MKNTALLIIDMINDFQFSHGPILAKKCEMITNPILQLKKTMKSFGYPIIYINDHYQLWRSDIDQLITHCTNEYSENIIHKIAPSSDDYIFIKPHYSAFYETPLNSLLGYLKIENLILTGVAGNICILFTANDAHMRNYTLYVPQDCIASNHDQDNLHALKIMETTLKANIVPSSQIKFN | Last |
1 | -74.700 | [Q] COG1535 Isochorismate hydrolase | ali follow.. | 24 | 29 | .ERAALLIHDMQDYFVSFWGR-NCPMMDQVIANIAALRQYCKEHHIPVYYTAQPKEQSDEDRALLNDLTRSPEQQKVVEALTPDEADTVLVKWRYSAFHRSPLEQMLKDTGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSREEHLMALNYVAGRS-GRVVMTESL... | 206 |
2 | -55.000 | [V] KOG4003 Pyrazinamidase/nicotinamidase PNC1 | ali follow.. | 20 | 91 | .LRVALLVVDFQNDFVDGSLKIAGQEPSSAITPLNELLQLSS--WDLVVYTKDWHPHNHISFLS-DHCIQKSWGSDIHPEIYIADNAEYIMKDSYSAFNDTELEDLLRRENIDAVVIAGLAYDICVRFTCLDAVKQNFLAAVIPECSAGLTKKGIEESEMAFKKQ-GVAMISKDEAR.. | 316 |
3 | -41.600 | [Q] COG1335 Amidases related to nicotinamidase | ali follow.. | 17 | 18 | .QNAAFVIIDYQPVQV---NSIASMDRQLLVNTIVGTSRAAVAYKLPIVHSTVNVKT--------------GLNKPPIPQLRKVGDFPTYDRTSINSWEDVEFREAVKATGRKKLIMTALWTEACLTFPALDALKEGYEVYVVVDAVGGTSVAAHEAALRRIEQA-GGKMISVAQLFCE | 178 |
4 | -7.080 | [I] KOG1602 Cis-prenyltransferase | ali follow.. | 9 | 31 | VPRHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTAFSIENFKRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNKRATLNICFPYTGRE------EILHAMKETIVQHKKGAAIDESTLESHLYTAGVPPLDLLIR | 207 |
5 | -6.580 | [G] COG0269 3-hexulose-6-phosphate synthase and related proteins | ali follow.. | 10 | 1 | MSLPMLQVLDNQT----------MDSAYETTRLIAEEVDIIE-VGTILCV---------------------GEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQI..................................... | 111 |
6 | -6.500 | [S] COG5394 Uncharacterized protein conserved in bacteria | ali follow.. | 7 | 1 | ................................................................................MGKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQIIFEQESKTGNTLLPISFLRQLISFYGDQMQM....... | 92 |
7 | -6.380 | [R] COG0433 Predicted ATPase | ali follow.. | 8 | 431 | .PRQLVITIEEAHRFLDSAIVHQ--------TIFGTIAREMRKYFVTLLVVDQR--------SGIDNEVMSQIGTRITCLLNDEKDIEAIFTG--VAGGQNLRSVLAKLDSKQQALVLGHAVPMPVVVRTRP............................................... | 544 |
8 | -6.090 | [H] COG2099 Precorrin-6x reductase | ali follow.. | 10 | 86 | .AEGFDILVDATHPYAARISANAVEAARLAVHTVGQAVTALGTTGKRVFLA--------LGRQELLPFEAAPQHSYLIRSVDPVEPPLRAPDARYGPFVTEDEIRMLEENRIEVVISSGGSAS---YGKIEAARRLGLPVIMIERPQQLNDTPANNVTVPDIATAL............. | 267 |
9 | -5.450 | [E] COG3033 Tryptophanase | ali follow.. | 8 | 186 | .ENVPYIVCTITCN--------SAGGQPVSLANMRAMYEIAKKYDIPVVMDSARFAENAYFIQQREPGYKEWTIEQITYESYKYADALAMSAKKMGGLLCFKMEDVYNECRTLCVVQEGFPTYGGLEGGAMERLAVGLRDGMRQDWLAYRINQIEYLVNGLEAIGVVCQQPGGHAAFVD | 363 |
10 | -5.380 | [TK] COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | ali follow.. | 16 | 14 | .NDPTLLLVDDDKPF------------------LQRLARAMESRGFQVTTAES--------------------VEEGIAAVKTSAPAYAVVDMRLGDGNGLNIIEAIRSRRADTRAI--VLTGYGNIATAVNAVKLGAIDYLSK................................... | 116 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4. |