FFAS03 results for 30260215

Query: gi|30260215|ref|NP_842592.1| recombination protein RecR (BA_0021) [Bacillus anthracis str. Ames], from B.anthracis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 .`
#	Score	Template	Links and tools	%id	First	`MHYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLDMKEDDVLGFAKALVNAKRDLAYCSVCGHITDRDPCYICNDSHRDQSVVCVVQEPKDVIAMEKMKEYQGVYHVLRGAISPMGGIGPEDINIPQLLKRLHDETVQEVILATNPNIEGEATAMYISRLLKPTGIKVTRIAHGLPVGGDLEYADEVTLSKALEGRREV`	Last
1	-91.600	`[L] COG0353 Recombinational DNA repair protein (RecF pathway)`	`ali follow..`	41	1	`MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQDVCNICSNPRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLASEKISELILATNPTVEGEATANYIAELCAEAGVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKI`	199
2	-8.960	[K] COG2093 DNA-directed RNA polymerase, subunit E``	`ali follow..`	24	1	`....................................................TEKACRNCHYITTEDQCPVCGSRDLSEELVIIIDVENSEIAKKIGAKVPGKYAV............................................................................................`	57
3	-8.510	`[L] COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding`	`ali follow..`	14	86	`................................VDEALFLAASKAVQYGHMSQTIRFCPQCGGRNYLNQCHDCRTPRIFPCIIVAVRKQQQILLAQHPRHRNGMYTVIAGFVEV-----------ETLEQCVAREVLEETGIVVT-------NIRYFGSQPWAFPSSMMMAFLADYDTGELK-PDYSELSDA.......`	235
4	-8.210	`[L] COG1658 Small primase-like proteins (Toprim domain)`	`ali follow..`	17	3	`..........................................................................EKQKINEVIVVEGRDDTANLKRYFDCE---------TYETGGSSIDDRDLERLKRLEDK---RGIIVFTDPDFQGERIRKIIMQAVP--NAKHAFLNRDEARPKGVEHANFEALNQALAEVFGG`	117
5	-6.880	`[L] KOG3084 NADH pyrophosphatase I of the Nudix family of hydrolases`	`ali follow..`	13	149	`.......................RSIFTEQYQLSASDSGACAFARSILDWISRYRFCPGCGKRNMGGTKLVCSDVLLNDDIMVILSHDMQHILLGRALRHKGLYACLAGFLEP-----------ESLEEAVVRETYEESGVDVE-------KVLYYASQ--PQSLMLACFGIARK-NAKIQRDKDLELEDV--SREEV`	333
6	-6.670	`[R] COG0603 Predicted PP-loop superfamily ATPase`	`ali follow..`	13	131	`..YPDCRDEFVKVLNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGL--HYLADKPTVMAAMKQKTGL...............................................................................................`	230
7	-6.550	`[J] KOG4080 Mitochondrial ribosomal protein L32`	`ali follow..`	15	58	`.............LWAVP------KHRRSVEKRLKRKFGYPEYNWKPLREKRNLRSCLQCGHDHEMGLCPFCYQKVLKETE----TLGLDPVDKEVIVLYEGE-------------------KAEQSTDDLKNKRIVEMKKPRPMWFTKNLLQKSTQQLSETKEVKPSDLA...........................`	195
8	-6.440	`[J] COG1491 Predicted RNA-binding protein`	`ali follow..`	15	105	`FNEAGPISTRLHQLELLPGIGKKHMWDILKAREEKPFESFEDIKNRVPMLSDPVKLIV............................................................................................................................................`	162
9	-6.420	`[R] COG1244 Predicted Fe-S oxidoreductase`	`ali follow..`	15	26	`...........................................................CYRYRIGKPCYMCSYPAQAPKKT-ILSHFLEAVHKIKGKDDRFSIRIFTSGSFFDSAEVRRDTRIRIFREISKLDNVYEVVVETRSEIIREDWVRELAEMVEDKWFEVA-------IG--LESANDDIADVSINKGSTF`	158
10	-6.400	`[C] COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit`	`ali follow..`	13	140	`.........FIEKCDVTIITDPEKVKEELEKAREIYNKRDEKTKALHEEDVDVFYGCVMCQSFAPTHVCVITPDR--DARAAAKIDPNGPIFEIPKGECLLGIYSGVNEVVRERSQGTVEEVTLHSALEKPCTSGCFEAIVFYIPEVDGFGIAHRGYKGETPMGIPFSTLAGQCSGGKQVP.................`	323

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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